Os12g0183200

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0183200| Description = Similar to 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase) (...")
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Gene Name

Os12g0183200

Description

Similar to 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase)

Version

NM_001072857.1 GI:115487675 GeneID:4351685

Length

3155 bp

Definition

Oryza sativa Japonica Group Os12g0183200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4212253..4215407

Sequence Coding Region

4212253..4212416,4212523..4212676,4212760..4212858,4212964..4213171,4214484..4214686
,4214775..4214848,4215015..4215090,4215303..4215407

Expression

GEO Profiles:Os12g0183200

Genome Context

<gbrowseImage1> name=NC_008405:4212253..4215407 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4212253..4215407 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggagctgccatcgccgccgccgccggccgccggcaaccagtacggagcggagcacgccgccgccaagaaggccgtcgccctcgccgcccgcctctgcaagaaagtgcagcaggacctcttgaaattggacgttcaaactaaggctgacagaacaccggtgacagtcgccgattatggatcacaggtattggtaagtgtggtcctgaagattgaattaccttctaactccttttccatggtggctgaagaggattctgaagacttgaggaaagatggagctcaagaaatgttgggacatatcaccaaacttgtgaacgaaaccatcataaatgatggttcgtacagcatcacattatctaaggaagatgtgctggtagcaatcgatggtggaaaatctgagggtggaccttctgggcgatattggatattggatccgatagatggaactaagggtttcataaggggagaccaatatgcaattggacttgcattactggacgaaggcaaagtagttttgggagcaatggcatgcccaaatcttcctttcaaatcaatagatcacaatggtggatcttcgggagatcaagttggtgccctcttttctgctacaattggctgtggatctacagttgagtccttagaaggctctcagccacaaaagatcagtgtctgttctatcagcaatccagtggatgcctcattctttgaatcttatgaaagaaaacactgcatgcgtgattgcacttcctccattgcagagaaacttggtattcaagctcctccagttagaattgatagccaagcaaaatatggtgctgtagcccaaggtgatggcgccatttattggcgatttccacacaaacgttccaaagaagcagtatgggatcatgcagctgggtctattattgtcacagaagctggaggtttggtaaaagatgcttcaggaaacgatttggatttctccaaaggtagatatcttgatcgtgatgctggcattattgcaacaaataaatatttgatgccattagttgtaaaagctgcccaagaggctatgaaggaggaaggaatactaggctga</cdnaseq>

Protein Sequence

<aaseq>MSELPSPPPPAAGNQYGAEHAAAKKAVALAARLCKKVQQDLLKL DVQTKADRTPVTVADYGSQVLVSVVLKIELPSNSFSMVAEEDSEDLRKDGAQEMLGHI TKLVNETIINDGSYSITLSKEDVLVAIDGGKSEGGPSGRYWILDPIDGTKGFIRGDQY AIGLALLDEGKVVLGAMACPNLPFKSIDHNGGSSGDQVGALFSATIGCGSTVESLEGS QPQKISVCSISNPVDASFFESYERKHCMRDCTSSIAEKLGIQAPPVRIDSQAKYGAVA QGDGAIYWRFPHKRSKEAVWDHAAGSIIVTEAGGLVKDASGNDLDFSKGRYLDRDAGI IATNKYLMPLVVKAAQEAMKEEGILG</aaseq>

Gene Sequence

<dnaseqindica>2992..3155#2732..2885#2550..2648#2237..2444#722..924#560..633#318..393#1..105#atgtcggagctgccatcgccgccgccgccggccgccggcaaccagtacggagcggagcacgccgccgccaagaaggccgtcgccctcgccgcccgcctctgcaaggttatttctcgtttcttccccttgttatttctttctatgatcagctttgggattgagatggatgaggttttgcattgacttctggtcgtgttagctgtggccattgatctggggttttgtttacctgatcttgagatgaaaatttctgactgaaattgctgcagctgcttggatgtacttacctcttgttttgtgtcttcttgtttcttcagaaagtgcagcaggacctcttgaaattggacgttcaaactaaggctgacagaacaccggtgacagtcgccgattatggtatttgttgatacgattttacgatattcttcatctgttctattataatatatgaatgatttttcaaaataagtaatttttatttcctaaaaaaatggatatattattatgttttgtaacttgtgctagatatgaacttctgaaatagtttacattccattaccaggatcacaggtattggtaagtgtggtcctgaagattgaattaccttctaactccttttccatggtggctgaagaggtaatttacaaatagtatacatttcgccttatttgttcagttatcacacagagaagcatctttttccattacttgttgacttataaaggattctgaagacttgaggaaagatggagctcaagaaatgttgggacatatcaccaaacttgtgaacgaaaccatcataaatgatggttcgtacagcatcacattatctaaggaagatgtgctggtagcaatcgatggtggaaaatctgagggtggaccttctgggcgatattggatattggatccgatagatggaactaaggggtaagtttttatgtatcatgttcgactgctagaaaattaaatgcaagtattttgctgtgattatagatcatcccaaggtacattagccatacctgaattgttagttttagtccaagctgctctagcacaaacacaagtcacagaatccctactttagatgtggatgaacatggtgatatttcagtttttttggtggaaattggtgatttattttactagtacaattaatttggttcccttgacttgacatgtgttctatctcaatcctgtggtccaatccaacttgcttagcattaaaggtggtggttgttattgttggtgttgtataaatgtggacaatgtgtaacaaactaacaacggtacatactaataatttttttcgccgggccggcgaagcacgctggccgagcttgtaccaaggaggggaagaaaaaaaaattacaaactttacaagtgttcagctgaaatgttgaggatgaagcatcctggccattagatcgagatgcgaagcaaccaagccctgtcgtaacaccgaggcagagtgccaggttacctggctcgtcggcacgaccactataccaagaagcttgccacttttagatttggcatttaactatttgccaccgatatgtcaatgacacgtgggtccacatgtgtcgataacatgtgggtccagtggcaaatagttaattgtcacgtgtaaaagtggcaaatggttaaatatctcgaacctggccctgccattttcaagtttcaacgtcgtccactcatcgattgtgcaatgtgcccatcatgcttccttataatactttgtttatttttctcttcaatgcataatagcatcataaagttatacttcatcaaatgtggaaatgaaacaaataatattcatgcattttgaattagtataataaaaggccatgataccacatgtctttaataaattagttgaaatggaagaacactatactcaaacatgttacagccatggtgtataagtgttggtggttctgggagatataatcacaatgcaatacaaacaaactagtaaagtgttaatcgacctagggtctatttttcttgtaagtttgcatatttggcagtaattttcttatttcacctctttaacaaatgattctgaaaacatcaaagatgtgtaaattatactaatttttagaggtatattatgatttcagatactccatattccaattattgataaaaagtagtgtcctgtgcaaaaccttttgttactattggcatgattcactaaggaatttcctttataatcccaacatttgtgttaatgcagtttcataaggggagaccaatatgcaattggacttgcattactggacgaaggcaaagtagttttgggagcaatggcatgcccaaatcttcctttcaaatcaatagatcacaatggtggatcttcgggagatcaagttggtgccctcttttctgctacaattggctgtggatctacagttgagtccttagaaggctctcagccacaaaaggtaatttatcactttctcctgaactatctgtggattagattattcccttctctgaataatattatctttttatttaccatcttgttttctaacttccaattttagatcagtgtctgttctatcagcaatccagtggatgcctcattctttgaatcttatgaaagaaaacactgcatgcgtgattgcacttcctccattgcagaggttggtccccaaaagttgcatacctaatttgtttctgatatgaataatcacacaagtaaatctgattatattatgcttggcagaaacttggtattcaagctcctccagttagaattgatagccaagcaaaatatggtgctgtagcccaaggtgatggcgccatttattggcgatttccacacaaacgttccaaagaagcagtatgggatcatgcagctgggtctattattgtcacaggtatataataactatattcacaaaaaaatgaattcaactaaagtatcgttctgttctcaaataaaataaacattgttcggtaagtttttttttctcatgtttgcagaagctggaggtttggtaaaagatgcttcaggaaacgatttggatttctccaaaggtagatatcttgatcgtgatgctggcattattgcaacaaataaatatttgatgccattagttgtaaaagctgcccaagaggctatgaaggaggaaggaatactaggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0183200, RefSeq:Os12g0183200