Os12g0187575
| Gene Name |
Os12g0187575 |
|---|---|
| Description |
C2 calcium/lipid-binding region, CaLB domain containing protein |
| Version |
NM_001189896.1 GI:297728922 GeneID:9270377 |
| Length |
5684 bp |
| Definition |
Oryza sativa Japonica Group Os12g0187575, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:4396206..4401889 |
| Sequence Coding Region |
4396206..4397412,4397480..4399018,4399078..4399145,4399276..4399322,4401227..4401479 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:4396206..4401889 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:4396206..4401889 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgactacctatctggttgtggaggttataagcgctgatataccctcaagcagcaatacctcccagaccaactattccgtggagcttcatttcaacagtcaaagtaagagtacgaccatcaaggaaaatgttgctgtatggaatgagaggttctcttttgatatgagacagcgagaggatccttctggtaacctcattcttgaagctgctgtctactgcttcgatcagatgagcaactccaagtcattgcttggcaaggtcttgctacctgaaaaatattttcaccgccattcagctaacgtagatccgatgcaatatacattggataatacagagggcgtcaatgcaaaagtgctacttaagttgttccttactgatgctgttgataggattctgcttgaaactgaggatcgtcatactcatcaaactgagggcaatgggttaaatggcatttacaactacttgtttcaaacaaattatggttatggcaaagatcaacatgatgatccggttgtcctggagactgccggttttgatctgatggagatcaacccaaatttcgagcctggcaggttgtttgagcgaatgcagcttctctttgtgcgtgtaataaaggctcgcaagctgccggacatggatgccaatggcagccttgatccctatgtcgaggtcaaatttggtgcttacaacaggggtgtcaccagatgctttaagaggaacaagaacccagagtggaacgagacttttgctttctccttccagcatgacaagattcccagccccactgtggatatcgtagtcaacgataaggatctggtcagagatgactttgtagggaagctacacttggatctcaagaacattccaaaaaggtctctggatgatgtcccactggaaccaacatggtacccactcctcgaccaggacgggacaaaattagcacaggccagcttgctgctcgcgatttggatagggtcacaggctgatgaagcatatcgtcatgtaggtttatcagggtatatacccaaagtgtatgagaacccaaacctatggtgcttgcgggtcacagtagttgaggtccagggtgttacagtaggagacgatgaacaggaggacatggccggctgcaacacaggcacagacacaggggtgttttgcagggcaaggttagggaaacaggttcagaggactagggcacttggaaagccattctttgaggatgaccttgagctacatgtgattgttgcaaatcccggtaaagatgaggttgtcatcggccaacagactgtaccattgtcttctatagtaaaaggaggcgatgaacacgaccactttgatgtcatgcccagcaagtggtttgatcttaaaaaccctgataagccacagttcgacagttctgtggatgatggcaatgacaacagtagccgcatgcgaatttgcctaaagaacatgctggatggtagatatcgtatcgtgcatgattctaaaggctatatggatgacactagacccgctgacaggaaactctggagacccccagttggtagggttcatcttgggatattgcgcgctaccggcctcccacttagaatgggcaaatcaacagtgaatccgtattgtgttgcaaagtatggtgataagtgggtacggacccgcacaatcctcgatggccctgaacatgtattcaatgaacagcatacgtggagcgtctatgacattgcgaccgtactgactgcgggtgtttttgaccatttcccacacacgcgtaaagcccatcgagagattggcaaggtacagattcatttatcttgccttgagactgatcgagtatatgcacactcctaccctcttatcattctgaatcgccgtgggttcaagaaagccggtgagctgcagatagctgtgaagttgtcatcagaatcttttatcagcctattaggcatgtacgcacggtccactctgcccaagatgcactatgaacaccccctgacagtaatggaagaagataagtttcgttcagaggtagctgaggtgatggcccttcgattcagccgggtggagccgcccctaaggagtgagattgttgcatacatgtgcaacgccaccggaggcaccagctgctggagtatgaggaaaagcaaagtgaacttttttcgactcatgcaggttgcttccccattcattcatttgtttcagagcgtgacctcatggaagaatcctgccgttgccttgatttcttgtgtcatctttgtcctggctctgtgcttccataagctagtactctcgatggtgatcatttattttgtcttagtagctttgtggaattaccggttcagaccaaggaagcctcctttttttgatcataaagtatcttgtttaggcagtgtacatccagatgagattgatgaggagtttgatagtgtcgaatcaagttgtagtattgacctggtaagaatgaggtacgatagactgaggagcgttgccggcagggttcaaacagttgtgggtgatgtagcaactcagggggagaggatccaatcattgttatgttggagggatcctagagcaactgcaatctttcagttcatcattgtcatggtatcgattgttgtgtattttgtaccaaagaaggttcttgtgggaatcgcaggattttacataatgaggcacccaaggtttcggaagaagaataatacaccatcgatcgttgagaatttctttcgtcgattgccagacaagcaagaagaagaatacaccatcgaacatttggaatttcttttctcgattgccagacaagcaagatattctcttgacaccaatcacatcacatctgcgtattaccacggtgttggtgggctgccgccgccgaccaggtcttcaacaccgtcacggcacgggtacgcgtgctacccccctagtattttggtgtcgggagtccgtgcggccgccgccaccgatttcatgtcatcgggaggtggtgtggtctccttcgtcttcgcggcggtggagcttagcccgggcgccgccgccactcccgcgtctccgccacgccactcgcaggccgccgcgccacacccgtgcctccgccgcccgccgccgcgacacccgcatgatgtcctccacttcttccagcagccacggccacgccggttgtggcgagatcacctgatcccccatgcgccagaatgcgactcggtgggcggagaggaaaggttcgatgatgccggcgacgacgcatcctcgttcagttggcggccgcgagagtgtggcggtgacgatggcgactttcttgagatccagcttgtccggctcgtaccagttgtgttggaggatcgcgttggggaggtcgaggtactcaaagttgttgaggttgacgaggaggtgctattgagcttgtgctcctcggcgccgtcgtacgaaccgaagtag</cdnaseq> |
| Protein Sequence |
<aaseq>MATTYLVVEVISADIPSSSNTSQTNYSVELHFNSQSKSTTIKEN VAVWNERFSFDMRQREDPSGNLILEAAVYCFDQMSNSKSLLGKVLLPEKYFHRHSANV DPMQYTLDNTEGVNAKVLLKLFLTDAVDRILLETEDRHTHQTEGNGLNGIYNYLFQTN YGYGKDQHDDPVVLETAGFDLMEINPNFEPGRLFERMQLLFVRVIKARKLPDMDANGS LDPYVEVKFGAYNRGVTRCFKRNKNPEWNETFAFSFQHDKIPSPTVDIVVNDKDLVRD DFVGKLHLDLKNIPKRSLDDVPLEPTWYPLLDQDGTKLAQASLLLAIWIGSQADEAYR HVGLSGYIPKVYENPNLWCLRVTVVEVQGVTVGDDEQEDMAGCNTGTDTGVFCRARLG KQVQRTRALGKPFFEDDLELHVIVANPGKDEVVIGQQTVPLSSIVKGGDEHDHFDVMP SKWFDLKNPDKPQFDSSVDDGNDNSSRMRICLKNMLDGRYRIVHDSKGYMDDTRPADR KLWRPPVGRVHLGILRATGLPLRMGKSTVNPYCVAKYGDKWVRTRTILDGPEHVFNEQ HTWSVYDIATVLTAGVFDHFPHTRKAHREIGKVQIHLSCLETDRVYAHSYPLIILNRR GFKKAGELQIAVKLSSESFISLLGMYARSTLPKMHYEHPLTVMEEDKFRSEVAEVMAL RFSRVEPPLRSEIVAYMCNATGGTSCWSMRKSKVNFFRLMQVASPFIHLFQSVTSWKN PAVALISCVIFVLALCFHKLVLSMVIIYFVLVALWNYRFRPRKPPFFDHKVSCLGSVH PDEIDEEFDSVESSCSIDLVRMRYDRLRSVAGRVQTVVGDVATQGERIQSLLCWRDPR ATAIFQFIIVMVSIVVYFVPKKVLVGIAGFYIMRHPRFRKKNNTPSIVENFFRRLPDK QEEEYTIEHLEFLFSIARQARYSLDTNHITSAYYHGVGGLPPPTRSSTPSRHGYACYP PSILVSGVRAAAATDFMSSGGGVVSFVFAAVELSPGAAATPASPPRHSQAAAPHPCLR RPPPRHPHDVLHFFQQPRPRRLWRDHLIPHAPECDSVGGEERFDDAGDDASSFSWRPR ECGGDDGDFLEIQLVRLVPVVLEDRVGEVEVLKVVEVDEEVLLSLCSSAPSYEPK</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1207#1275..2813#2873..2940#3071..3117#5022..5274#5367..5684#atggcgactacctatctggttgtggaggttataagcgctgatataccctcaagcagcaatacctcccagaccaactattccgtggagcttcatttcaacagtcaaagtaagagtacgaccatcaaggaaaatgttgctgtatggaatgagaggttctcttttgatatgagacagcgagaggatccttctggtaacctcattcttgaagctgctgtctactgcttcgatcagatgagcaactccaagtcattgcttggcaaggtcttgctacctgaaaaatattttcaccgccattcagctaacgtagatccgatgcaatatacattggataatacagagggcgtcaatgcaaaagtgctacttaagttgttccttactgatgctgttgataggattctgcttgaaactgaggatcgtcatactcatcaaactgagggcaatgggttaaatggcatttacaactacttgtttcaaacaaattatggttatggcaaagatcaacatgatgatccggttgtcctggagactgccggttttgatctgatggagatcaacccaaatttcgagcctggcaggttgtttgagcgaatgcagcttctctttgtgcgtgtaataaaggctcgcaagctgccggacatggatgccaatggcagccttgatccctatgtcgaggtcaaatttggtgcttacaacaggggtgtcaccagatgctttaagaggaacaagaacccagagtggaacgagacttttgctttctccttccagcatgacaagattcccagccccactgtggatatcgtagtcaacgataaggatctggtcagagatgactttgtagggaagctacacttggatctcaagaacattccaaaaaggtctctggatgatgtcccactggaaccaacatggtacccactcctcgaccaggacgggacaaaattagcacaggccagcttgctgctcgcgatttggatagggtcacaggctgatgaagcatatcgtcatgtaggtttatcagggtatatacccaaagtgtatgagaacccaaacctatggtgcttgcgggtcacagtagttgaggtccagggtgttacagtaggagacgatgaacaggaggacatggccggctgcaacacaggcacagacacaggggtgttttgcagggcaaggttagggaaacaggttcagaggactagggcacttggaagttggaaagcaaaggacaaccagtggtagctatgaatggaaagaggaccttttatttgttgctgcagagccattctttgaggatgaccttgagctacatgtgattgttgcaaatcccggtaaagatgaggttgtcatcggccaacagactgtaccattgtcttctatagtaaaaggaggcgatgaacacgaccactttgatgtcatgcccagcaagtggtttgatcttaaaaaccctgataagccacagttcgacagttctgtggatgatggcaatgacaacagtagccgcatgcgaatttgcctaaagaacatgctggatggtagatatcgtatcgtgcatgattctaaaggctatatggatgacactagacccgctgacaggaaactctggagacccccagttggtagggttcatcttgggatattgcgcgctaccggcctcccacttagaatgggcaaatcaacagtgaatccgtattgtgttgcaaagtatggtgataagtgggtacggacccgcacaatcctcgatggccctgaacatgtattcaatgaacagcatacgtggagcgtctatgacattgcgaccgtactgactgcgggtgtttttgaccatttcccacacacgcgtaaagcccatcgagagattggcaaggtacagattcatttatcttgccttgagactgatcgagtatatgcacactcctaccctcttatcattctgaatcgccgtgggttcaagaaagccggtgagctgcagatagctgtgaagttgtcatcagaatcttttatcagcctattaggcatgtacgcacggtccactctgcccaagatgcactatgaacaccccctgacagtaatggaagaagataagtttcgttcagaggtagctgaggtgatggcccttcgattcagccgggtggagccgcccctaaggagtgagattgttgcatacatgtgcaacgccaccggaggcaccagctgctggagtatgaggaaaagcaaagtgaacttttttcgactcatgcaggttgcttccccattcattcatttgtttcagagcgtgacctcatggaagaatcctgccgttgccttgatttcttgtgtcatctttgtcctggctctgtgcttccataagctagtactctcgatggtgatcatttattttgtcttagtagctttgtggaattaccggttcagaccaaggaagcctcctttttttgatcataaagtatcttgtttaggcagtgtacatccagatgagattgatgaggagtttgatagtgtcgaatcaagttgtagtattgacctggtaagaatgaggtacgatagactgaggagcgttgccggcagggttcaaacagttgtgggtgatgtagcaactcagggggagaggatccaatcattgttatgttggagggatcctagagcaactgcaatctttcagttcatcattgtcatggtatcgattgttgtgtattttgtaccaaagaaggttcttgtgggaatcgcaggattttacataatgaggcacccaaggtttcggaagaagaataatacaccatcgatcgttgagaatttctttcgtcgattgccagacaagcaaggtactctcatataatacatagcagtaacacttcatctatataaagcttggtgctttcagaagaagaatacaccatcgaacatttggaatttcttttctcgattgccagacaagcaagatattctcttgtaatattgtgctcagcattgcactcttgatcgagtatgttaagttgccttagcagccttaccttccaggacatgttgttcgactcaaataactagactgtaccattttttattctcttctttggtttaggacaccaatcacatcacatctgcgtattaccacggtgttggtgggctgtacgtgtatttctaaacattgtaaatactgaagtagtaggttacatcgtcccaacaactagtggtctagtattctggatggtagtcagctgtgtgaggaggaacagatcttacattgtgagaaaccatagaccaccatcgtggatcgcgctcacgctgcacagctagtaatttgttgtaatcgttgttgtagtattgtgcctgtttgaatggttatgtaacactttatgtcagttttgtaatactactacttagagctgttttttttttttaatgtcagtttgtagagctacttccttggtccttgtatcgtggatgtgcccgtgcttgtgcgagtacttagcttcgattgtttgtggtctgaacatttaatgttttagcatcaagtgaacatttaacgactgtcttctcatctttttctagtaattgaaaatcatatgcctcatttttttttaaaaaaagtctgttttgaatcttgcatagcacaaacgagcatgaagatactatacgaagtttcagactgcattatgcattgcacaccctggcaccttcaggcctagattgaaaactgcaaccattatttgtattagctgtgcactggctgctgctcatggaacaagtcaattggttgaaaaagaatattaaaaaagaactctcgcagcacatctgcacttttttatttaatcagagattgatccactgatcgacccagtttgttaataaagccaataacatgtaaaaacagccaaaaagaaaaaaaaaacacagaaacgctgggttaatttgctagcttacacgaaagcacaaaaagactccagattgggccaacttctaaactgaaacctccaggcacaaaaagagacagcggagctaacaactcagcaagatagcatctactccgtagacagctatttgtccagattcattgtactagaaggagtcacatttcattctagattaaagtttttttagttccataaaaaaaccaatcaagtgctagatgtgatacatcctaatactagttctatgtttgtttttttttttgacggagggagtaggtctgaattcttgacatcaggttcccaacctcctcttcctcgtttgccgcacgcacacttttcaaactgctaaacgatgcattttttgcaaaatatttctatacaaaagttacttaaaaatcaaattaattcatttttaaaaaaataattagctaatacttaattaatcacgcgctaatggaccgctccgtttttcatgcagagggatggttcccaacccaacaatcgaacacagccagtgcagtacaagtccatcgaagctacagccagggaagatcactgaaataggaataagttcactttgtgaccctcaaaagtgatcaaaatataatccgtgaccctaaaccacaaaaccggatatcttgacccctaaactcttaaaaccggtgcaatttgactcccttggcggttttaaaaggcggttttgctgacgtggcgtctacgtggcggtattgaccgggtctcctctacacgtggtgttgacgtggcgtttaggtggtatttagaattaaaaagtatgtgtgggacctatttatcatggacacagaagagaaattgtgggacccacgtatcccttctctctcccctccctctagttccttctccttcctcgccgctccctctctctctcccgcagcggcgagcggtggagacatcggcgagcggtggaggtgtgggtgtggcgtggcggcctacgagcggcgggcgacactatagcggcgacggtggcggcggcgcccgggttgagctccaccgcggcgaagatggaggagaccagagcggcggcggcgggaggcacacgcagcggggtacagcgagctcggccgtgccctgctcaacctgcaggccgccgccgaccaggtcttcaacaccgtcacggcacgggtacgcgtgctacccccctagtattttggtgtcgggagtccgtgcggccgccgccaccgatttcatgtcatcgggaggtggtgtggtctccttcgtcttcgcggcggtggagcttagcccgggcgccgccgccactcccgcgtctccgccacgccactcgcaggccgccgcgccacacccgtgcctccgccgcccgccgccgcgacacccgcatgttagtgggtcgcacacacggacgtcttcctccgtggtgaggacaaggaaagcttcatactctagtccgttgcggttgaaggtgtagtgcaggatgtcctccacttcttccagcagccacggccacgccggttgtggcgagatcacctgatcccccatgcgccagaatgcgactcggtgggcggagaggaaaggttcgatgatgccggcgacgacgcatcctcgttcagttggcggccgcgagagtgtggcggtgacgatggcgactttcttgagatccagcttgtccggctcgtaccagttgtgttggaggatcgcgttggggaggtcgaggtactcaaagttgttgaggttgacgaggaggtgctattgagcttgtgctcctcggcgccgtcgtacgaaccgaagtag</dnaseqindica> 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| External Link(s) |
