Os12g0189300

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0189300| Description = Isocitrate lyase and phosphorylmutase family protein| Version = NM_001072865.1 GI:115487691 GeneID:4351693| Length =...")
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Gene Name

Os12g0189300

Description

Isocitrate lyase and phosphorylmutase family protein

Version

NM_001072865.1 GI:115487691 GeneID:4351693

Length

4162 bp

Definition

Oryza sativa Japonica Group Os12g0189300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4498793..4502954

Sequence Coding Region

4498926..4498995,4499080..4499179,4499290..4499363,4500088..4500170,4500339..4500363
,4500480..4500499,4501304..4501450,4502035..4502502

Expression

GEO Profiles:Os12g0189300

Genome Context

<gbrowseImage1> name=NC_008405:4498793..4502954 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4498793..4502954 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaggtgaacggagccaataacggcaacggccaccacggccacggcaacggcagcggcgctgcggcggcggcgatcgtccagaagaccgggttctacgccggcttcatctccggctacgccgtctccggctccttcctcggcacccccgacgtcggcctcctcacgccgccggagatggcggaggtggcgaggcggatctgcgcgtcggcgcccaacacactcttcatcgccgacgccgacactggtggtggcaatgctctgaatgtgaagcgtactgttcaggacctgatggcagcaggtgctgcaggctgcttcctcgaggaccaggcatggccaaagaagtgtggacacatgcatggcaagcaggtgataccagcagaggagcacgctgtgaagatagctgcagcgagagaggtcgttggtgatcgggacttctttatcgtggcccggactgacgctcgatctgtcactggtcttgatgatgccattaggcgtgccaatctctacatagatgcgggagcagacgcgtgcttcgtggaggcgccgcggagcgacgaggagctgatggagatctgcaggaggaccaagggttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcacacgaggcaggagctcatggagatggggttccacctcatcaagtcccccctcaccaccgtctacgctgccgcccgcgccctcgtcgacgtcctcgccgccctcaagcgcgccgagaccacccgcgacgagctccaccgcctcaccaccttcaccgagttcaacaacctcgtcggcctcgactcctggctcgacatcgaggttcgcttctccgtcaactcctcctcctccgttcccaagccgctcccggcaccaccggcgctggagaccacgacggagatggagaaggccaaggccaaggcggccgccgtcgtcgccggaaacggagctaccaatggggtacactaa</cdnaseq>

Protein Sequence

<aaseq>MAEVNGANNGNGHHGHGNGSGAAAAAIVQKTGFYAGFISGYAVS GSFLGTPDVGLLTPPEMAEVARRICASAPNTLFIADADTGGGNALNVKRTVQDLMAAG AAGCFLEDQAWPKKCGHMHGKQVIPAEEHAVKIAAAREVVGDRDFFIVARTDARSVTG LDDAIRRANLYIDAGADACFVEAPRSDEELMEICRRTKGYRVCNMLEGGKTPLHTRQE LMEMGFHLIKSPLTTVYAAARALVDVLAALKRAETTRDELHRLTTFTEFNNLVGLDSW LDIEVRFSVNSSSSVPKPLPAPPALETTTEMEKAKAKAAAVVAGNGATNGVH</aaseq>

Gene Sequence

<dnaseqindica>134..203#288..387#498..571#1296..1378#1547..1571#1688..1707#2512..2658#3243..3710#accaccgcccacaacctcagctcagctagcaaaagtacaatatcccttgtacggacgcctagctaagctaagctaattaagctctaatttctcttttcttttttcttcgatctccggcgaaaaagtaagtacaatggccgaggtgaacggagccaataacggcaacggccaccacggccacggcaacggcagcggcgctgcggcggcggcggggcggtcgacgagtgtgtcgaggaagatcgagtcggagggggcggtgctgatgcccggggtgtacgacgcgctgtcggcggcgatcgtccagaagaccgggttctacgccggcttcatctccggctacgccgtctccggctccttcctcggcacccccgacgtcggcctcctcacgtaattaattaacacacaattaattaatctcatatatatatacacacacactctgtttgtgtgtgaattatttgctgacactagccgtttctccggcgaggttcatgcaggccgccggagatggcggaggtggcgaggcggatctgcgcgtcggcgcccaacacactcttcatcgccgacgccggtcatctctctctcctctctctctctctctaaaaatggcactttaatatatataagaccaagaaagaaaagcaaattaacaaagaaagcatcgtataatatatgcagtaaagttgacagtgcatgctagatttggaatgctaatgattcagctgggacatgtttgtatagtaatttaagtacaaacttgtgtgtatatgtatgtatgcatgcatggtacccctcgagatataattatatgttgcacatgaactttgctggaaagcacaattatatattagctgaaagggggaaattaaaaaataacactgtcctataacgctgttctggggtccatcaccatgcacaccagaagcttggaccagggatctgcaagtgaaaacagtgggtgttaaaatatatttcttgttctccaaaaaaaagtatatatgttggtgcatgaaactgtttaagaagagtagtttataaggacaaaattatatttttgttctcctggagacatttgctaggtgatctgtttccttcagtgctaaaagaatgttgacacaagtactgctacagctttttttaattatgcatgccatgacgatgattactgttgagatgacgtactttagccctttttaactttaaataaattgtattttaattagcatcacttactgtacatgattaatatgattttctgttgtctgatgcaaaatgtattctttttttccctccagacactggtggtggcaatgctctgaatgtgaagcgtactgttcaggacctgatggcagcaggtgctgcaggctgcttcctcgaggtgatggattcttcttcaccttgtcttgctcgcactgtgcaccacatgttccctttgcaactattaatcaatagtagtggttttgattttgacaaccaaaaaaatatatatcatattgtcactagtaatcagtaatattgattctgtcttctcttttgcaaattccaggaccaggcatggccaaagaagtgtggtaaggaactattcatctgtcacatcaggaaaattgttttttcctcaggattttcttctctcttttttttcgattgctaatttacttttgtgtctgtttgttcatcgatcgtcaaggacacatgcatggcaagcaggtaaatactgacaacacactgtttttgtccctacatgttctagacaaacatgtactactactgtatagtgatactaattctgtttagcactctgttcaccattgcaaatccatgccaatttatagcttaagtacgtacacttaatgcacacctgccaaaatctaatgaggaaataaattggtaaccgatcctgtcgttccgtgacatcgaaataataacaggactaatgtgatgaatcacaacttaattatcacaagttataatgcaaaaatagctagctaggatggttcaaaatgaccagaaaattcgccctagctatatatatttaccctctattatttcacatagcggagatttgatatatatatttatatctactttgaatatatggtgtcactttcactaaacatattgatattggaaatgaagattctgctgaattaattcagtgacacgtaggccccaacattttataccatgcatgcactgttaaatatggaggacccattacaactttgcttttgtatgtataaatatgtctctgatgtattaatggcaagttctagctagatccgatcgatccaacattttgtgcattaaacaaaaacaaactaccaacaacaatcaattaatgattttatcacagccattatatgttgtctagctagctatgtagtagagtggtaataagatcgagtgcaccatgttctgcatcttgtcaccatcatcgaggattacaaaattgtggccggcattaattaccttgatctctaactctccttgtgttggttaaaattaaattaggtgataccagcagaggagcacgctgtgaagatagctgcagcgagagaggtcgttggtgatcgggacttctttatcgtggcccggactgacgctcgatctgtcactggtcttgatgatgccattaggcgtgccaatctctacatagatgtaagcagatgaccacttcttttttctagagagagataaatcatgttctagagaatctcttcagagtcaaactctcgtttaaatttgatcgatctcaaccaccaactattaatcttaaacaagttcaagtctgtcaagaatcaatgttttgaaattaattagttctttcattagatattggtcaaagttgcattttgaaaactgatatatgtgaggcgaaaacactttctttttacatgatgaaatgaaaatggtttgtatctttgtcttctattatatattaggctcacaaacaatgtctgtggtatatttttctcctatataatggaatttaacccattggtgtttttacattggtctttactggttgtagaatccaatctaaaccgttcattttcttctaatcaaataaaatcctatcaattatattactatacgtacctcaactacggataatacaattatttcttttcctatttactagtaggatatattcataccagtagagatcaccgtaaattaagctattattattcaacatcatatcatatctaatatgaatatatgtaaaaaaaaaattgtaggcgggagcagacgcgtgcttcgtggaggcgccgcggagcgacgaggagctgatggagatctgcaggaggaccaagggttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcacacgaggcaggagctcatggagatggggttccacctcatcaagtcccccctcaccaccgtctacgctgccgcccgcgccctcgtcgacgtcctcgccgccctcaagcgcgccgagaccacccgcgacgagctccaccgcctcaccaccttcaccgagttcaacaacctcgtcggcctcgactcctggctcgacatcgaggttcgcttctccgtcaactcctcctcctccgttcccaagccgctcccggcaccaccggcgctggagaccacgacggagatggagaaggccaaggccaaggcggccgccgtcgtcgccggaaacggagctaccaatggggtacactaagatcgatcaagatcaagctaccaatggaataaattatcaatcgaaatgtggctgtcatcagggagccatgaaatatggtggattacattgattaattctcctgcattattggtgaattttgtgaggtatgtgttattattgcatggtacgtagctatatattgctgtgtgagtgagtgagtgattatgttgggattgggtgcgtgattccgcacataaactgtaaggtaaatatgtgttgagtattcttcgttttccaattttttcgattcagtacagtatatgcagctatgcatctgtctgaattttgagtcagtatgctcgtgtgtgcacggtccagattgatcgtcgatccatgaagcatctgtactgtcagtcagtgtcatgttcagtgtaccttcaaatttatttggaataaatcggcccatggaccgtctaccattgggctgttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0189300, RefSeq:Os12g0189300