Os12g0209700
| Gene Name |
Os12g0209700 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001072927.2 GI:297612844 GeneID:4351771 |
| Length |
7091 bp |
| Definition |
Oryza sativa Japonica Group Os12g0209700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:5731341..5738431 |
| Sequence Coding Region |
5731341..5731409,5732085..5732170,5732687..5732777,5732939..5732988,5733392..5733461 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:5731341..5738431 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:5731341..5738431 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgatgcagatggatgtggatggcgagtcgagtggagctcgagctctcggagacatgggcgatctggaaacatatgcatttgagaatgaaagttgtggaatttgtagagacattgtcattgatagaggagttctggattgctgtcaacactggttttgctatacatgcattgacaactggtctgccatcactaatcgctgccccctttgcaaaagtgaatttcagcatataacatgcacgccagtgtatgataccactggagccaataatgaagatgaatactctttaaccagtggtgatgatgattggttgcaaggggaaagcaacactctttccttcccatcatactatattgatgcagaagcagtagtttgtttggatgatggtgattgcaagattcggagtggacttgtgtcggtggaggatgattcaacttttgatacatcaattgcttgtgactcttgtgatttatgtggggactgttcaactggttctgataggacaactattgatgcatcattttctgggagggtgtccgtatctgttgctgatgaaggtgaaactgcccttgttgtctcaatggttggtgtacattctgaaattcgggatggtttgaagactgaacagaaagggttgaattccaattcatatccaagctattccaaagatgatctgttgaacgaaactgttgcagatgccaaaatattgaggaactcagatggtttcagtatatcacacaatagatactctgaaatgaaccttgtccacacggtttcttctgagccaacagaaaggccattggaattttcaccaatacgtgagtcagcgcatacgttatttagaccagagcagggtaacatgtcaaatgtacaggctccatcctgttcattttcacaaaccagcaaagtacctgaaaattcaggagaggagaatgcattgtttagaaacaatgcaagatctactgtcatcgaatctccacaactttcttcaccagctggcaatgtggcaagatcgaacgacatagatatgattgatgcaggtgaggttcagcagatgagaagtgctcctgtcgggcagttgacatccatgcatgatggagaatctatcagtgacatggaagaagttaaatacaaggaatcaggtgatgaaattggtcatcctgcaaagagagcaagatcagaagtgccagaacaggaaattaatatgattgggaattcagatgatcgtactacttctagtgcagcaaaagctacaattggtgatacgccagaatttctcagatcggataaatctgttcctgatataatgagcatagttgaaggagaagactacagcagagatcctggtagagagttggcaaggcctgtaggaagaagagcaggagataagcctggcctgagagtgaaaaagattttccggaaggaagaaggaaaaaaatccacagctgtagttcaaaagctacaacaagagatcagggaagtagttagggacactggcactacaatacttgagaaggagaacgcttttgatgaaaaacttttgactgcattccgcgcggcaattggaaagcccgcagatgaaccagcgggaagagctaatctttcactcataaaatcaaggagggcattgcttcaaaagggcaagatacgtgagaatctgaccaaaaagttgtatggatcatccgctggaaggagacgaagtgcatggcaccgtgattgggaagtcgaattctggaaacatcgttgctcttcagggataaatcctgaaaagatcgagacactgcagtcagtacttcagttactcaagaaatcctcagaaatggataaagaaattgctcaagataagaagggagtgaatactgactccattttgtccagggtatatttggctgatgcatcagttgttcccaggaaggatgatgtaaaacctttatctgccgttgcaggatgcccacctaacaatagcaaggcacctaacaaacccacaccagggactgaaacaaccaaaatcagttcacccaacagcactgggaaagtgttgagttcttcaatcattagtaaagaagcatctagccgaagagagaacaaaaatagtcaggcagcacctaatcagcagaaccaatctgctggtgatatcaagcatgacaaaagaaaatgggctcttgaggtcctggcaagaaaaaatgccatttctattacaagcaaagacaaatctgaagttgctgatgatctcaagggaaactaccctctcttagcacaacttcctgtcgatatgagaccacagctcacaactggccgtcacaataaagttcccctttcagttagacaggcacaactttaccgcattgtggagcattatctacagaaagcaaatttgtctgtcattcgcagatgtgcagatactgaattagccattgctgatgctgtcaatgtagaaaaggatatttccgaaaggtctagtagcaaatcagtttatgtgaatctttgctctcaagctactcgtcaacctgccaaaggaaaatcggagaatgatgcttcagacctaattgaaaaaagtgaatcagagaacggaccattaccacagcaagttcaaactgaaaatactgacatttgtaacattgatactgaagaatctttaaatagaacaggccactctgatcttcgtgcaagtcccagacaaactataaagggtgaaacaggtggagatctggtgccagagaaaactgttggcttcagcaacgtggaagaagcactcaaaatggcaggcctcttggactcccctcctaacagtcctgagagaaagaacaccataattgaaggagggtgcattgttgatacggattctgaacccagcaaaaaattgcagtcaacttctgattcaattgtgagggatatatcatcgcacaaagatgctgatgattcctccatgctaattgatcttcatgatgaaaatggtcaaaacctccatactgtaacatcatctcagcaatcaaaacatactggtgatgagcatcagaaattgatactcggagaggaatctacggatgtaacagcaaataaaattgtctcagtgaacttggatgaagctggatgtagtgcggaacacggaaactcaaatgggtcaaataaagaaattccagccgacacgaatatgcctgatgaaggtgctgggcatgtggggggtgcaaaagaggtgaaagtgccagcaagtgatttgtgtaaccattcttgtcaggcaaatagctctccgacagaaggtaaaaaggacagcaagataccgatcttggactccaccgaagatagatcctgcagtaacaatgcagagttgaacaatagacttccgaacagaaacaaattgtccaccgatccagcccaaagtggggatgattcaaagaagtcagcacgggatccagataatcacaaaccagattcctctggttctatacataagaaggttgaaatgttcgtgaaagagaacatcagaccactttgcaagagtggtgtaattaccgtcgagcagtataggtgggccgttgcgaaaacaacagacaaggtcatgaaataccattctgacgctaaaaatgcaaactttctgatcaaggagggcgacaaggtgaaaaagctcgccctgcagtatgttgaggcagctcagcaaaaggttacatga</cdnaseq> |
| Protein Sequence |
<aaseq>MSMQMDVDGESSGARALGDMGDLETYAFENESCGICRDIVIDRG VLDCCQHWFCYTCIDNWSAITNRCPLCKSEFQHITCTPVYDTTGANNEDEYSLTSGDD DWLQGESNTLSFPSYYIDAEAVVCLDDGDCKIRSGLVSVEDDSTFDTSIACDSCDLCG DCSTGSDRTTIDASFSGRVSVSVADEGETALVVSMVGVHSEIRDGLKTEQKGLNSNSY PSYSKDDLLNETVADAKILRNSDGFSISHNRYSEMNLVHTVSSEPTERPLEFSPIRES AHTLFRPEQGNMSNVQAPSCSFSQTSKVPENSGEENALFRNNARSTVIESPQLSSPAG NVARSNDIDMIDAGEVQQMRSAPVGQLTSMHDGESISDMEEVKYKESGDEIGHPAKRA RSEVPEQEINMIGNSDDRTTSSAAKATIGDTPEFLRSDKSVPDIMSIVEGEDYSRDPG RELARPVGRRAGDKPGLRVKKIFRKEEGKKSTAVVQKLQQEIREVVRDTGTTILEKEN AFDEKLLTAFRAAIGKPADEPAGRANLSLIKSRRALLQKGKIRENLTKKLYGSSAGRR RSAWHRDWEVEFWKHRCSSGINPEKIETLQSVLQLLKKSSEMDKEIAQDKKGVNTDSI LSRVYLADASVVPRKDDVKPLSAVAGCPPNNSKAPNKPTPGTETTKISSPNSTGKVLS SSIISKEASSRRENKNSQAAPNQQNQSAGDIKHDKRKWALEVLARKNAISITSKDKSE VADDLKGNYPLLAQLPVDMRPQLTTGRHNKVPLSVRQAQLYRIVEHYLQKANLSVIRR CADTELAIADAVNVEKDISERSSSKSVYVNLCSQATRQPAKGKSENDASDLIEKSESE NGPLPQQVQTENTDICNIDTEESLNRTGHSDLRASPRQTIKGETGGDLVPEKTVGFSN VEEALKMAGLLDSPPNSPERKNTIIEGGCIVDTDSEPSKKLQSTSDSIVRDISSHKDA DDSSMLIDLHDENGQNLHTVTSSQQSKHTGDEHQKLILGEESTDVTANKIVSVNLDEA GCSAEHGNSNGSNKEIPADTNMPDEGAGHVGGAKEVKVPASDLCNHSCQANSSPTEGK KDSKIPILDSTEDRSCSNNAELNNRLPNRNKLSTDPAQSGDDSKKSARDPDNHKPDSS GSIHKKVEMFVKENIRPLCKSGVITVEQYRWAVAKTTDKVMKYHSDAKNANFLIKEGD KVKKLALQYVEAAQQKVT</aaseq> |
| Gene Sequence |
<dnaseqindica>1..69#745..830#1347..1437#1599..1648#2052..2121#2221..2330#2656..3176#3569..3662#3808..3938#3954..4987#5096..5170#5328..5817#6088..6722#6879..7091#atgtcgatgcagatggatgtggatggcgagtcgagtggagctcgagctctcggagacatgggcgatctggtatggcaatatggcatcccttccccctttgcacagtgtgtagttcttgttgcttcgttaggtgctaaaccttagggtttgctgctggtattgtcaatttgagttgaggggagcaactaaacatggccgggtgaatttggttggggatggataccagtgcattagaagcttaaaatgttcttatgctactcatactacggtttgctcggagcaattcacgaatcgctatagtgctcgtattattattacagcatgggcatgtctcaattttgagtcaatccctgtttgacatttaatccaaattttagttggaaatggtctctagtataagaggccatactgctctctccactaagagttaagggaaagcgagggaggcactgataatggaactttgtattataatggctttatattttcttgctcatccccttatccttgtgctacgaggacttctcttcaccagctttgttactccactctggcaattcaatgttgtgagctagttatgttgaggtgggatgcattgttcacccaaagagtagtaattgtactttgcatagtagttctatgttgctgtgttcttgcttttgcagtagcaatgaactttgtaccttcagtcctgatgtagttatgttttgtgctttaacatagtccatccaaactcacttgcaggaaacatatgcatttgagaatgaaagttgtggaatttgtagagacattgtcattgatagaggagttctggattgctgtcaacactggtagggtttcatcatggaccaacaattatccaacatatttttcacttctatagcattattgcataactgcttgtatgcatattgcatttggctcttgatggtcagcgttatgcagctaggaacttccttggtcacaatatgttactggaatgtgaatcagtacgagatgtcatttgtttatttgatagtttcttgtttgtaaactaagcatgtcagggcatataggttttgccatacatttctgtatcccctagttgtcattacttgcttatctacttcattttttttccctgcatttactttgtgatgtttaagtgctctagttccaaattggcattccgctcataacttttttttattgtcgagttcacgcattgtatcttggtaactggactgctcattctatgttctctgtttaaaataatttgtagccatattagtactgatattgtatttttcagtgataaatgaagtttttttaattctaacaatggagaattggatttcatacaccaggttttgctatacatgcattgacaactggtctgccatcactaatcgctgccccctttgcaaaagtgaatttcagcatataacatgcacgccagtaagtgaaaattatcattggtgctgacattcttccatggaagaaaataagaaatcctaatatctgtgctgacattctttacatggaaaagaaatttaacttaattcctcaaaaggtagaactgccatggaatataatagtttatttgctatttattaaaggtgtatgataccactggagccaataatgaagatgaatactctttaaccaggtaaagttgaaagttcctatattttaagtttgcatgcatactttaacatctgtgagcttaactgtcttacagtttggctccctgtttcctcattaggtaggctcatgcttttccctgttttggtctttcatctcataatgatacatgttcagcattgtcataattacaaatttagttacggaatcacaattccattaaaaattattttgagtcacctgaccatgttaattattgtgcataactataatcaatgacatcatttgcctgtgacttcgtgccataccattattgtgaagttcttctatgcttcataatctttcttcaatttattttcaagtaatgcacatagatataaaattaatgccatattcacactctccaatttgtatttcttattgtgcagtggtgatgatgattggttgcaaggggaaagcaacactctttccttcccatcatactatattgatgcagaagtaataatactcaataggctcttcattttcttttaaaaatcatacttatctatctcatcaagatgattttgttacttgctgtttccccccatcctccaggcagtagtttgtttggatgatggtgattgcaagattcggagtggacttgtgtcggtggaggatgattcaacttttgatacatcaattgcttgtgactcttgtgatttatggtacttatagctatattattatccaatttaaatgtgtccactattagttgagactttatgaccatatttgttttctgattactaatccttaagccaggtatcatgctctatgtgtgggttttaatccggaaatggcaacagaagattcatggttgtgcccaaggtaattccatttttcttacgtttcataacccctcaccactagttatcaagtattcttcgtttgctcttcttttgtaataattaatatatcaatcctattttatagatgcgtatctactgaagtgaaacacaaggcagatgctatcttgaaacaaaatttcagtggggactgttcaactggttctgataggacaactattgatgcatcattttctgggagggtgtccgtatctgttgctgatgaaggtgaaactgcccttgttgtctcaatggttggtgtacattctgaaattcgggatggtttgaagactgaacagaaagggttgaattccaattcatatccaagctattccaaagatgatctgttgaacgaaactgttgcagatgccaaaatattgaggaactcagatggtttcagtatatcacacaatagatactctgaaatgaaccttgtccacacggtttcttctgagccaacagaaaggccattggaattttcaccaatacgtgagtcagcgcatacgttatttagaccagagcagggtaacatgtcaaatgtacaggctccatcctgttcattttcacaaaccagcaaagtacctgaaaattcaggagaggagaatgcattgtttagaaacaatgcaagatctactgtcatcgaatctccacaactttcttcaccaggtttgttggtagtatgcatattcatgcacaatgtttgtaagccttattcatctagctcatcagaaatttgcatgcacctacaggtgcctaacttattttttaaccaccttatttgaatgtttgatcgtaccaccagttgttgataggttgatgtatttggataccgtggtttctgtgcttaccacatctatgaaaagaaattccatgtcaacaattgtttgtcttattcttttgcataccaagcatcagcaagctgaaaagtggcataatcttgtttttatacaatgcccatcttttttttttcaaacactacaatgcatttttttaggactagaccctatagacatggcactgtacagccaacatgaattatttctcttttatcaatgcagctggcaatgtggcaagatcgaacgacatagatatgattgatgcaggtgaggttcagcagatgagaagtgctcctgtcgggcagttgacatccatgtgagtatcttttaaattgtaatgctgactttcgagaaccgattgtcccacaagatttacatagattgaacaaaacatagtgtgttgcatatctacttttccagtttcattttagtaattttccccttattcgtttttttttcaggcatgatggagaatctatcagtgacatggaagaagttaaatacaaggaatcaggtgatgaaattggtcatcctgcaaagagagcaagatcagaagtgccagaacaggaaattaatatgattgggaattcaggtatttctccaacagatgatcgtactacttctagtgcagcaaaagctacaattggtgatacgccagaatttctcagatcggataaatctgttcctgatataatgagcatagttgaaggagaagactacagcagagatcctggtagagagttggcaaggcctgtaggaagaagagcaggagataagcctggcctgagagtgaaaaagattttccggaaggaagaaggaaaaaaatccacagctgtagttcaaaagctacaacaagagatcagggaagtagttagggacactggcactacaatacttgagaaggagaacgcttttgatgaaaaacttttgactgcattccgcgcggcaattggaaagcccgcagatgaaccagcgggaagagctaatctttcactcataaaatcaaggagggcattgcttcaaaagggcaagatacgtgagaatctgaccaaaaagttgtatggatcatccgctggaaggagacgaagtgcatggcaccgtgattgggaagtcgaattctggaaacatcgttgctcttcagggataaatcctgaaaagatcgagacactgcagtcagtacttcagttactcaagaaatcctcagaaatggataaagaaattgctcaagataagaagggagtgaatactgactccattttgtccagggtatatttggctgatgcatcagttgttcccaggaaggatgatgtaaaacctttatctgccgttgcaggatgcccacctaacaatagcaaggcacctaacaaacccacaccagggactgaaacaaccaaaatcagttcacccaacagcactgggaaagtgttgagttcttcaatcattagtaaagaagcatctagccgaagagagaacaaaaatagtcaggcagcacctaatcagcagaaccaatctgctggtgatatcaagcatgacaaaagaaaatgggctcttgaggtcctggcaagaaaaaatgccatttctattacaagcaaagacaaatctgaagttgctgatgatctcaagggaaactaccctctcttagtatgtgtcttcttatcctaaaagatatttcaaaagaagttcattgtaaatttctctagtatcatattttgtttctattcatctaaaacagctgtttgtttttttcaggcacaacttcctgtcgatatgagaccacagctcacaactggccgtcacaataaagttcccctttcagttagacaggtgatcattcatggaggcctttattattcatttgcacctttttagtcaagtcaatattgaaggctattttgtttacataagatgaatttagattataaattgcacgtatgtattttcgtccaatagccaagtaatcaactgaaggtatttatgtcaggcacaactttaccgcattgtggagcattatctacagaaagcaaatttgtctgtcattcgcagatgtgcagatactgaattagccattgctgatgctgtcaatgtagaaaaggatatttccgaaaggtctagtagcaaatcagtttatgtgaatctttgctctcaagctactcgtcaacctgccaaaggaaaatcggagaatgatgcttcagacctaattgaaaaaagtgaatcagagaacggaccattaccacagcaagttcaaactgaaaatactgacatttgtaacattgatactgaagaatctttaaatagaacaggccactctgatcttcgtgcaagtcccagacaaactataaagggtgaaacaggtggagatctggtgccagagaaaactgttggcttcagcaacgtggaagaagcactcaaaatggcaggcctcttggactcccctcctaacagtcctgagagaaagaacaccataattgaaggtaattctgatacactttgtaggattttctaggttgcctatctttttttaggaatagtactcttgtgttgttgattagctgcatgcctgtgttgggttgcggtattttctggtgggctgctagatcgtgttgatacttattttcttcttgatgcgaatatatgcaaccctcctgcgtgttctctaaaacaacccagatcactttccaatctttccaaattttcgtcacataaatatttaagtgcaaaggatattttgtttgttaatgcaggagggtgcattgttgatacggattctgaacccagcaaaaaattgcagtcaacttctgattcaattgtgagggatatatcatcgcacaaagatgctgatgattcctccatgctaattgatcttcatgatgaaaatggtcaaaacctccatactgtaacatcatctcagcaatcaaaacatactggtgatgagcatcagaaattgatactcggagaggaatctacggatgtaacagcaaataaaattgtctcagtgaacttggatgaagctggatgtagtgcggaacacggaaactcaaatgggtcaaataaagaaattccagccgacacgaatatgcctgatgaaggtgctgggcatgtggggggtgcaaaagaggtgaaagtgccagcaagtgatttgtgtaaccattcttgtcaggcaaatagctctccgacagaaggtaaaaaggacagcaagataccgatcttggactccaccgaagatagatcctgcagtaacaatgcagagttgaacaatagacttccgaacagaaacaaattgtccaccgatccagcccaaagtggggatgattcaaagaagtcagcacgggatccagataatcacaaaccagattcctctggttctatacataagaaggtaaaacaacttgtatgttacactacattttttgtgcttcgctaactttagatccctagattcagaatactagttagtgttgcatggtagtccctctgtttcatattataaactttttttaaaaaactgctttgtttgacatttcaatgtatgcaggttgaaatgttcgtgaaagagaacatcagaccactttgcaagagtggtgtaattaccgtcgagcagtataggtgggccgttgcgaaaacaacagacaaggtcatgaaataccattctgacgctaaaaatgcaaactttctgatcaaggagggcgacaaggtgaaaaagctcgccctgcagtatgttgaggcagctcagcaaaaggttacatga</dnaseqindica> |
| External Link(s) |
