Os12g0226900

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0226900| Description = Similar to Allyl alcohol dehydrogenase| Version = NM_001072965.1 GI:115487891 GeneID:4351818| Length = 2314 bp| Def...")
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Gene Name

Os12g0226900

Description

Similar to Allyl alcohol dehydrogenase

Version

NM_001072965.1 GI:115487891 GeneID:4351818

Length

2314 bp

Definition

Oryza sativa Japonica Group Os12g0226900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6915239..6917552

Sequence Coding Region

6915330..6915563,6916074..6916251,6916521..6916687,6916801..6916883,6916971..6917349

Expression

GEO Profiles:Os12g0226900

Genome Context

<gbrowseImage1> name=NC_008405:6915239..6917552 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:6915239..6917552 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgacggcgagcaacaagagggtgatcctgaagcggtacgtgacggggctcctgtcggaggatgacatggaggtggtgacgacggaagtgccaccgttggccgtcgtcccagcagggtcggaggcggtggtggtgaagaacctgtatgtctcctgcgatccttacatgcgcaaccggatgacccgtcatgaggtgcctagctatgtctcagactttatcccgggagaggttttggcaaattttggcgtgatgagggtgatatcatccggccacccagatttcaaggcaggtgatcttgtttggggaataaccggatgggaagaatacaccgtgattaacaatccggaatcacttttcaggatcaatcaccctaaacttcctctgtcctactacactggtattttaggaatgccagggcttacagcctatgctggattctttgaagtgtctaagccgaagaaaggtgaatatgtctttatttcagcagcatctggtgccgtaggtcagattgttgggcagcttgctaagatcataggctgctatgtggttggcagtgctggttctgacgaaaaggtcagcttattgaagaccaagtttggctttaatgacgctttcaactataagaaggagccagacctcgaggcagccctaaggaggtattttccagagggtatcgacatctactttgagaatgtgggcggtgagacgctagatgcagtgctacctaacatgcgcctaggtggtcggatcgcggcatgtgggatgatctcgcagtacaacctagagcggccagagggggtgaaaaacttgttctatatcgtcaccaagcgtctgcgtatggaggggttccttgtgtttgacttctatgacaggtactaccagttcgaggatgaaatggctaggtacctaaaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggcaccggcagcactcattaagctcttcaccggccgcaatgtcggaaaacagctcgtcgccatcgcacgagagtga</cdnaseq>

Protein Sequence

<aaseq>MAATASNKRVILKRYVTGLLSEDDMEVVTTEVPPLAVVPAGSEA VVVKNLYVSCDPYMRNRMTRHEVPSYVSDFIPGEVLANFGVMRVISSGHPDFKAGDLV WGITGWEEYTVINNPESLFRINHPKLPLSYYTGILGMPGLTAYAGFFEVSKPKKGEYV FISAASGAVGQIVGQLAKIIGCYVVGSAGSDEKVSLLKTKFGFNDAFNYKKEPDLEAA LRRYFPEGIDIYFENVGGETLDAVLPNMRLGGRIAACGMISQYNLERPEGVKNLFYIV TKRLRMEGFLVFDFYDRYYQFEDEMARYLKEGKVAYVEDVVEGLDAAPAALIKLFTGR NVGKQLVAIARE</aaseq>

Gene Sequence

<dnaseqindica>92..325#836..1013#1283..1449#1563..1645#1733..2111#gtatgcatccaagttgctataaaggttaggcaggcaggcccccgctcaccaggagaattagctagggagctaggtgagcacgagagcagcaatggcggcgacggcgagcaacaagagggtgatcctgaagcggtacgtgacggggctcctgtcggaggatgacatggaggtggtgacgacggaagtgccaccgttggccgtcgtcccagcagggtcggaggcggtggtggtgaagaacctgtatgtctcctgcgatccttacatgcgcaaccggatgacccgtcatgaggtgcctagctatgtctcagactttatcccgggagaggtacgagctttcaatgtcatagaattatcttttttataaattaataatataaactgatatactcataataagtctgtgtgcacttttatgtgtttattatcaagttatgtcaccattattagtgcacttttatgtgtttatcattaagttatgtcaccattaatggtcaaaaactattaatttctccttatttttctcttggaatgtttaccgaattacccaattccgtattgaaaatatgttcagttccctttcctttgccatgtactaatgttcctttttttttgtgtgaacataaaactattgtttgaagttgaaccacacatgatttatccatgccctctggacgttgggagcctttttttcctcacaagtgacatactctgaatacaaaaattaatgagattattaatatataaatctgaacaaaaattgctctgtttttcattcaccggaaatctttaaaaaatatataattttgctgtgccccgggataaaaacacattgcaggttttggcaaattttggcgtgatgagggtgatatcatccggccacccagatttcaaggcaggtgatcttgtttggggaataaccggatgggaagaatacaccgtgattaacaatccggaatcacttttcaggatcaatcaccctaaacttcctctgtcctactacactggtattttaggtgagttcattgtccctgcactaacatgttcttgtcacaagcaaattttcatctgtaatgcctggtaaatcatcccctcatatatttgtttcacatcaaacaacgtgtactattttgtgttcatcctttatgatctcaaagttggattgatcatgttaaccttttttccgtaaacaaggtgttacactccatgacatttccagttaattcaaacaaatctcaagttgttttcttctctaattaactgagttaaatccttgaaaattcaggaatgccagggcttacagcctatgctggattctttgaagtgtctaagccgaagaaaggtgaatatgtctttatttcagcagcatctggtgccgtaggtcagattgttgggcagcttgctaagatcataggctgctatgtggttggcagtgctggttctgacgaaaaggtttatacaatctcatctgctttgcaactttagaactaatagaccttaaaaaaccaatggccatttgagacctccagttacatttgttgaaaatcaatgtgtggcatttccaggtcagcttattgaagaccaagtttggctttaatgacgctttcaactataagaaggagccagacctcgaggcagccctaaggaggtccgtactccttccaatataatgaaatacaattttgatattccatgcatggcaataactcatccatgttggtttggttggtcttaggtattttccagagggtatcgacatctactttgagaatgtgggcggtgagacgctagatgcagtgctacctaacatgcgcctaggtggtcggatcgcggcatgtgggatgatctcgcagtacaacctagagcggccagagggggtgaaaaacttgttctatatcgtcaccaagcgtctgcgtatggaggggttccttgtgtttgacttctatgacaggtactaccagttcgaggatgaaatggctaggtacctaaaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggcaccggcagcactcattaagctcttcaccggccgcaatgtcggaaaacagctcgtcgccatcgcacgagagtgatacggtgccacactgctcggcacgcaaattagcattaccgaggagtactactgtagttgttcagatttcagaaatgggggcatcccgtttgtcttgtggggttcagaaaatagaaataaagaatagatatgttcaacgatttgggtgacttatccagtattgtgctgtgttagaaaattaagtacaacgatttttgtttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0226900, RefSeq:Os12g0226900