Os12g0227400

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0227400| Description = Similar to Allyl alcohol dehydrogenase| Version = NM_001072966.2 GI:297612881 GeneID:4351819| Length = 4485 bp| Def...")
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Gene Name

Os12g0227400

Description

Similar to Allyl alcohol dehydrogenase

Version

NM_001072966.2 GI:297612881 GeneID:4351819

Length

4485 bp

Definition

Oryza sativa Japonica Group Os12g0227400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6931639..6936123

Sequence Coding Region

6935159..6935362

Expression

GEO Profiles:Os12g0227400

Genome Context

<gbrowseImage1> name=NC_008405:6931639..6936123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:6931639..6936123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctgactatctttgatcattcaggaatgccagggcttactgcctatggtggattctttgaagtggccaagccaaagaaaggtgaatatgtcttcatctcatcagcattcggcgccgtaggtcagattgttgggcagcttgctaagatcacaggatgctacgtggttggtagtgctggttctgatgaaaaggtttgtataatctaa</cdnaseq>

Protein Sequence

<aaseq>LTIFDHSGMPGLTAYGGFFEVAKPKKGEYVFISSAFGAVGQIVG QLAKITGCYVVGSAGSDEKVCII</aaseq>

Gene Sequence

<dnaseqindica>3521..3724#tccaattgtagcttggttaggcagaccctcccagttcattcggagaagaaagggtaggacgagggcaacaatggcggcgacggtggtgagcaacaagagggtgatactgaagcggtacgtgacgggacttgtctcggaggacgacatggaggtggtgacggtggaggcaccgccgctggccgtgccggcagggtcgaagacggtggtggtcaagaacctgtatatctcatgcgacccctacatgcgtaaccggatgacctaccacgaggagcctagctatgttccggactttgttctaggagaggtatgagttgtagaactaactatgtccctctatcccaatttgattattatctaagtaaagagcatcaagaccaagaacaccaaaacatccattattctgaaactaattctcatcaattaaggtgctcgtcgcttcatgtccaatataaattaactcacactttaaatgtttcatgtattgaacaatatatcgcttcatatctaacataaataattaattcacactttaaatgtttcatgggttgaacagaatataaattaatcttggttgcatgcatcgaaagaatttcacgatgcacgtttactttttgcacaaataaataaatatatgtttttttaagatggtgagtattttgagaaaaacctaaaatttaattttaggtgataattaaattgggatggaaggagtaatatagtaatctgctcctaatgagtctgtgtgcacttttacgtgtttactattaattaagttattatatatcaccattaatgatcacaaactattcctttttcttttttcttgaatgaatatttaccgaattataccaaattccatgttgaaaatctgtatagttcccttccctaattttgcaatgcaggtgaaaaactcagttcctttttctattattttcttgtgaacataaacctaatgtttgaagtttaaactacttatgacatatcctatgcaaataagcttatcgtgcacactccatgcaaatcaactaccaaatgctatgaaaagttatataaaaaattgagtaaatttcacaaaactacatgtattttgcacaatttatcacataactacatattttagagcttgttttacaaaactacagctttagtgtctccgtttatcacaaaactacaagtgctttgtataatctatcacaaaattattgatttagtgtattcgtttatcactgaacgacacatttagtgtcttcatttatcacaaaactacagatttagtgtcctcattatcacaaaactacaggttttagaaatggagacactaaacctatagttttctgataaatgaagatattaaatctattgttttgttaaacaagttcttaaatatgtagtttttgatatattgtgcaaagtacctgcagttttatttatacgaagacactgaatctatatttttgtgaaacaaattcttagatctgtagttttgtgatagatcgtgcaaagtatctgtagttttataaaatttactctaaaaaattgagcatttacacctaatagtattatacatatctgcaaagctcgtattcgaattcattatatattagccataacaaaaaggtgaaaaatatgacagttttaaaggtaaaaatcttttagaattttatctcttttgttacagttaaaatataatgaatttgaaaataaaatttcatgcatatgtgtaatacttccaatggaagtatgtgtccaattttttctagaattttatgtgacatttgctagtcggtgtgcccgggaaacttgtgtgcatagaatatgttcccatgtaccataaataataatacatgttgttatttacaactttcaccaaaaaaagaggtttttttttccaaaatttactcatttattaatttttataattaagtaaaagaaatttttaattgggtagctcaaataaaactttgtacttcttaattctaaattttggaactatagaaatataaaagaaaaattataactgggactccaaaccgggtacatctcaatatatattaactaaagttttagaattattaaatcatgaaacatatataattgaaactcaaataaaatgtactcctccgtcccaaaatataagcaagtcaaacgtttttaactttgactgctagcatcaaaaaaataaaaaagattggtcatgtgagaatgaagttatcggatttatcactaaacaaacaatcataataagctacttcttttatttaaaataacttatttttataaatattattgatcaaagtagcatattgaataccatgtcaagtccaaaactgcttatatttttggatggaggtagtagttgggtgcttactaatttcaaatttacaatataaatattaaattgaaacaacaacatcaatacaaatcaaaacttattagttccaaaattttgatcaggttattttctaaatctcgagcctcacaaaggtgttatgctattctgaatcttccagacagtttgaaatgtttaatgtgctgtagcaatatcaactcaaagctattaaacaggaaccagactttgatgatcaagtatctatattaacttgaagtaatgatacaggatcttacacagtcattccagtgatgatgacatggactgtaaacaaatttatcagctggagaaaatagaatataacaagagaaatagtagaaaatggattctatatacaatttggtaaatactaattttgattttcgaacaataaacacagatatatttgtcctcggaatgctcaaatttattaactctcaatttagtaactgatgtaattgacagatattaaatttttaaaactctataatataaataattatagccacgtaacacacgggttgatgactagtatatatatttttgctatcctatgggataaacacttttcaggttttggtaaattttggcgtgatgaaggtgatatcatctgggcaccaggatttcaaggcaggtgatcttgtttgggggataaccggatgggaagaatatacggtgatcaacaatccagaaacacttttcaagatcaatcaccctgaacttcctctgtcctactacactggtattctgggtgagttccttgtcattctgtttgtgtgtacactatcttgtttttgtcaaaaggaaattttgaactgcgttgcctgaaaaccaatccagatcctctgctgaaaaccaatccagatcctctgctacagtactgctcactgacatgtgggccccatagacccagaggacccttactccctgaaaaccatcctctaatatatttgcttcacatctgataaaacatggtgttttattttgtgttcgtcctttctgatctaaaagttagattgatccccttaaccttttatcttaaacaaagtgttatagtttgtgacatttccagttaacctgtggttgattatttttgttacagctcattaaataagtgccaaattggggcccccaattcgttatcttctctaactgactatctttgatcattcaggaatgccagggcttactgcctatggtggattctttgaagtggccaagccaaagaaaggtgaatatgtcttcatctcatcagcattcggcgccgtaggtcagattgttgggcagcttgctaagatcacaggatgctacgtggttggtagtgctggttctgatgaaaaggtttgtataatctaatagaccttaaaatcaatgccctctcatagctcctgtcctgttgcatttgctaagaatccaccggctgcatctccaggtcaacttattgaagaccaaatttggctttgacgatgctttcaactacaagaaggagctagacctcgaggcagccctaaagaggtctgcactcctccatattctttccaatataatcaaataaaattacaatgttccaaatagagcaataacacaaacccgctgatttggcttgtctcaggtgttttccagatggtatcgacatctacttcgagaatgtaggtggtgcaatgctagacgcagtgctacctaacatgcgggtagctggccgcatagcggcatgcgggatgatctcacagtacaacctggagcagccggagggagtgtataacatgatttgcatcgtcaccaagcgcctacgcatgcagggattccttgtgtttgacttctatgatatgtactaccagatcgaggagcagattgccgggtacctgaaggaagggaaggtggcatacacagaggatgtcgttgaggggctcgacgctgcgccggcagcacttgtcaagctctttactagcagcagcatcggcaaacagctcgttgccgtcgcacgggagtgatacggtgccatgttgctcggtacgtgagttggcattattcagtagcgtacttgttcaaaatttagatataagggcttccagtttagcttgttggattcagaaataaagaactgatatgttcagaac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0227400, RefSeq:Os12g0227400