Os12g0227500

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0227500| Description = Similar to Beta-glucosidase aggregating factor| Version = NM_001072967.1 GI:115487895 GeneID:4351820| Length = 2606 ...")
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Gene Name

Os12g0227500

Description

Similar to Beta-glucosidase aggregating factor

Version

NM_001072967.1 GI:115487895 GeneID:4351820

Length

2606 bp

Definition

Oryza sativa Japonica Group Os12g0227500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6944328..6946933

Sequence Coding Region

6944328..6944611,6946753..6946933

Expression

GEO Profiles:Os12g0227500

Genome Context

<gbrowseImage1> name=NC_008405:6944328..6946933 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:6944328..6946933 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctactacgaaatcacctctcgtggcgcactcatcaagggcagggagttcaacttctccaacctctacctctaccacatctacaatagctcggaaccgaaccagcagcagatcatagacaacgtttcttccactgccatgggtgggctgaccgtcaacaattggacggtgtacgatggagttgcgagcgatgcgacgcttgttgcccgagggcagggcctgcatacctacgctggcaactggcattgctccttcaccttggttttcgaggatgaaaggtttaacggatccacccttgaggtgaaggggatatttgaagagactcatgactgggctattgttgggggaacaggcgagttcgctatggcatctggtgtcataaagaaaacggtgtatgagcgaacacccgaggggacaatcattgaactcacgatccgtgggttttgccccgatttttaa</cdnaseq>

Protein Sequence

<aaseq>MASYYEITSRGALIKGREFNFSNLYLYHIYNSSEPNQQQIIDNV SSTAMGGLTVNNWTVYDGVASDATLVARGQGLHTYAGNWHCSFTLVFEDERFNGSTLE VKGIFEETHDWAIVGGTGEFAMASGVIKKTVYERTPEGTIIELTIRGFCPDF</aaseq>

Gene Sequence

<dnaseqindica>1..284#2426..2606#atggcctcctactacgaaatcacctctcgtggcgcactcatcaagggcagggagttcaacttctccaacctctacctctaccacatctacaatagctcggaaccgaaccagcagcagatcatagacaacgtttcttccactgccatgggtgggctgaccgtcaacaattggacggtgtacgatggagttgcgagcgatgcgacgcttgttgcccgagggcagggcctgcatacctacgctggcaactggcattgctccttcaccttggttttcgaggatgaaaggtaaaatatgtactatgtcaataatatttgtgtttctgtatatttgtagtttataactagaaaggaagcccgcgcatatgcgcgggcaccttatttattgttaataaaattaagtcatatctcactatatgcatataagaaattatagattttgccttacaattaaaaatatatatgtcgtgaaatagaccgtagactttaataaacgataagaatgtttcttatattcaaacaaaaatcattttcgttcataatacacgtaaactcacctattgtcaccattactaactatcattgttgctagatgcctttttaataaatggaattacatctgtatcaccaaaataagcctaatacattattaatacataaaacattaatctccactatatgcatacctaaatatttatctcaactcttatttctaaatatataaataaatattctaaaaacactgcttctattggttaatgggataacactgataaaaattagacatcaatatccctctaataggtggagctaccaaggatttatttctcttttgccttcaaacatgggttttatagtgacgtactcgtgcctatcaaagctagcatggagcataattttaagtcgtatttcactatcagcaccctcaaagatcattagtaagtaggaagttgagtgctattatcgacggtggccttcaatgggtctgcctcaacttaatcatatgtatgtccctcctataattatgtttactacttgttgccctttaggaaagaaagagaagatggatgtgatgaaactaattctttccttaaaaatattattttttacgttttgcgttgacacaatttgtttgtagtgttaatcagtactgcttaaattttatatggtatagatacaatattctcttttaaaatgagtgaggttggtcattaaaaaatgtatcgttaaacatacatacgaccgtgataatcttcagagtatcatattattgataatcttcagagtatcatattattgtttatattttgataaatatctatattttagcgtctagtttgttttcatcccctattattcataacaggtccatcaatttaaatgaaaattgatgacgagattacgtagttccacgtggcagtctaagagtgattgtagaagtgccacatgaccatatttatgagcattaaattatatttttatagtgtagaaaatcctatttaaaaagatagtctatttttccacgatggttctaacacatatatttttctttaaggttttatagctttttttatcgtacttacgtgcttttttcaaatgaacagtataggtaaaggtatttttttcccatcgcaagtttttccagtaaacgtcgtttgtttttttccaaacgaacagtatgtacaggagagactaatggaattttactatatactccctccgtttcgttttatttgacacagttgactttttagcacatgtttgaccgctcgtcttattcaaaaaatttaaataattattaattcttttgctatcatttgattcattgttaaatatacttttatgcatacgtatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaataaaacgaaacggagggagtaatagaagatagatagattgatttattatcaataataaaaattattattattatttttgtctccactatgtacatggaaaataaaaagaaggaaaggttaattacgtacgtacacgggaaggagtaaccattgttggttacgtacgtaggtacctatgtaatagaaccgaagggaacggaaatagaaccgaagggaacggaaggagtagccgctgttcaggttgttttaagatcaatatctaatctaacgggttataatattggatccaccgatttaagtgaagatcaacgaatggatgttttgcttttttctcagattttctaggattttctctaatttattagagcaccacgtgtcggcttgagagcgttttgaggaagtttaatttaatggacttttagtatataatagatgttgtagcactgagataaattcgtaaacatgtatgacatttttgcaatgtgtgatcattgaaataggtttaacggatccacccttgaggtgaaggggatatttgaagagactcatgactgggctattgttgggggaacaggcgagttcgctatggcatctggtgtcataaagaaaacggtgtatgagcgaacacccgaggggacaatcattgaactcacgatccgtgggttttgccccgatttttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0227500, RefSeq:Os12g0227500