Os12g0228500

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0228500| Description = Homeodomain-like containing protein| Version = NM_001189921.1 GI:297728972 GeneID:9272305| Length = 5034 bp| Defini...")
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Gene Name

Os12g0228500

Description

Homeodomain-like containing protein

Version

NM_001189921.1 GI:297728972 GeneID:9272305

Length

5034 bp

Definition

Oryza sativa Japonica Group Os12g0228500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6984047..6989080

Sequence Coding Region

6984767..6985300

Expression

GEO Profiles:Os12g0228500

Genome Context

<gbrowseImage1> name=NC_008405:6984047..6989080 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:6984047..6989080 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattttttatctatggacagatgatatggagcgagagcgatattacacaaacttgatcaatgatgagagcaaccattttggctcgagtgagatgggaagccagtatgatgatgaacaagaaccagttgtgaatgaaaatgttgctgtgagaccgaaccaaaaaagatcaaaaaatttcagtttggaggaggacaatcttttggtgtcggcgtggataaatgtttctttcgatccggttcaagggacggatcaatctcacggtacatattggggacgtattcatgactactttcatcagaacaaggaattcgaatcagatcgctcccaaagttcacttgtacatcgttggtccactatacaagaacatgtcaataagtattgtggtttcttaagtcagattcagaatcgaaatcagagtggtgtcaatcatgaggacatggtaatatattgcttgtgttgcttattttccaatcgtctcctttatgtttctgacttcagttcatttatttgcagcatgtgcaagcaagcctga</cdnaseq>

Protein Sequence

<aaseq>MIFYLWTDDMERERYYTNLINDESNHFGSSEMGSQYDDEQEPVV NENVAVRPNQKRSKNFSLEEDNLLVSAWINVSFDPVQGTDQSHGTYWGRIHDYFHQNK EFESDRSQSSLVHRWSTIQEHVNKYCGFLSQIQNRNQSGVNHEDMVIYCLCCLFSNRL LYVSDFSSFICSMCKQA</aaseq>

Gene Sequence

<dnaseqindica>3781..4314#atcgacgttaccccaaaaatcgcctctgctccctccgctcccagaaattgacgccaccaatttcttccccctattcggattccggtcatggagatgctactgccaccaccgatgaactcctcctcccagtcgcggcgaatcaagcgaccccgatgaaaaatcgagctccccggcgacggatcgacctgccacgatggcggattgagcggcctcacctctcctcaccggatccagccagtgtcgtggccatcttcgagctcgagctgcatgcctccgtgcgacagcggcggtggatcggacaagggtgacgcggatctgtcggcctccaccccagatgagcgattttccactctaccggattgagtgtatatttggctttgtcttttatctgactggatttctcttctttttcttcttaattaggattcaattgttcttaccataaagatgtttttaggcccgatttggttaggttttgggggaattttgggttaaactctatcggttttctataggagagacggggatagattcggtcggtttctttaggagggacggacagaggaagtgcggagggcggaggggatcgtgaacaaaggggacgctccaccaaaatgtcttaaaagatccctccattgtaagtcatttttaccatttctagagataaaatattttaataaaaaatgaaaataaaaaaaatccaaagaattccatcgtaaatccacctgccgctctttctctactggtagagaataccgagcccataatttcgttttagctatctgggccatgagaaagcccatctagcccaactggaaccgcacaagaggattagggtttcgctctctcaacccacatgccccctatttaaatagctcctccaagccgccgtcaatccatcgtctcgcctcccccgcactgctccgcctccattgcttcgcgtctcgtatttggatcttccttctgtccatggtgaatcttccatcggttcttgccttgtctgatctgtttttccattttttgtgttgtttcagtcagtcaggcaacttgtttatgtgatttctttcgtttgccattgagccgaaacgagttgctgatctgggtagattttggatgtgttgggtttcttgtagtatttggaattggttggtccgagttggggttgtaggaatcatcaggaagaaagccaatttgcagagcaaaggggccagatgcagtggctatctttgcattgaaggttggcgacaacgaacaaacgcagttctccgtgccgctcagattttctctgttttgtgacggcctcgaacaagctgctacatccactttcttgattgtatcttttgttttgattgggtcttgattttgggctcagatttatggccagagcaatcttttgttttgattgggtcttgattttgggctcagatttatggccagagcaattttgtctttttttttttgctgatttaggcttttggattgtttgagattggatctcacttgcaagaaccgccgctatatctctatgaagtacttcgtttgtttttttgttcgcattttcaaatcgacaactgttaatttatagtgagaaataaatttatatcgttttgaaaactcgtaattggcgatgtcgaacaaaatgtaaaatagagataactactgaaataatcaacgctcacctctcgattaagactcagttcggtcatattaccgcggcaagaaatggcccgttgaaccaacgaacgaatgacctttctatttaatacaggttggaacgacacgagcagatgagtcaacctggtaaaattatgcgaagtcaggattaactgatgtctaatcttctttaaaagacaatcttcaaaatcttttattcaactgatgtctaatcttctttaaagacaatcttcaaaattttttattcaatgggatgcacaattctaaagatgtaaattgatttggttttaaaagttaggggacttgtgcacgggtgtacgattgatggatgcgaatgaaacttaaggggacttttcctccaaaaaatcgagcaaggagcttgtcagagtcgtggcccattacgctgggaggcccatttacatagctcagtaagggaggatcgtttacgaatgaaataagttcatcccaggtctcttaactttataccgaatccgattttcatccttcaatcctaaaaccagatacgtccctaaactgtcaaaaccagtgcaaacgaggtccttcagcggtttggaaaacggttttggttgatgtggctccaacgtggttggtttgacttggtctttgttccatttggcatttgatatggcacttagagcatgcccaacagcttcctttttcaattccctatcctgtgatttagggaattttgatcaagaaacagatccaacagattctctaactaatatcccaatatctctggttcctcagtccgcatatatcgttcctcacaaacagggaagcgattttgttcccaatatttcctcgtcggtctctctcgcgcgcaaagcagtctctcgcgcgcgcaaagggaaaatgttcccgcgcacttctccgcgccctcgctcctcagcggcgaagccttctccgcgccctcgctcctcggcggctacaccttcttcctcggtgggggcaccctcttcctcggcggcggcgtcctcttcatcggcggcagctcccttttcccttttgcaaggcacggggcgtggtgtcccgatgacggccggaggtatgccgtttccgcggtacggcgagttctggcccggcggccatccgtgccctccaccaccgcctggcggccatccgcgccccacaccgccgcccggcggccatgcgcggcccccaccgccgcccggcggccatgcgcgccccccaccgccgcccgccggccatgcgcgccctccacaacgctactccggttttcaggcatccgaggccatggagaagctgacatctagcgagccattggatcccctctcacacgaagcttctatcggcagttcctccagagtatggactgtaggtgacgaagaattcctccacatgaacaatttcggtaagtccaatcctgatttgttcagtgtttagtttacatgctctgaattccttcacatctgaagctttcttgattgtgctttctttttttttcttcaatctggatagtattgtctaatttatactatctgatagaggttgcattttcagaaattttcatcatgttcttttgtgtatgcttgcaattgtagcaaaattgcctgacttgaacaagggtatgtctgctgtatgtgctgatgtaattcactgtggtgtatatcctgcatttatgtccagaagtatatagggtatgtacagcatgcaggaaagaatagtcagtggtgttgtgctggaatttcagtttgacactatgtagtgagtataatatgctatcaaatttatgctctgagtttgacacaatggaaattcagtatgtactgagtttcatatacgatgctctgaaatttgacctgttgaacagttatctgaaccttgtcgctgtcaggatcgatataggaacatttctatgaaccttgtcattttcagtatccaaattagcaacatttgtgtgctctctccatgcgaatgcacagcttttgattaatattatgtgtacacaaagttgtcaccatccattacatgtgaactttcagataacagaatgcattttttgtccagaaattatcacttgtttgtcttttgttagtctttttttttctcaagtacaaggttatgattttttatctatggacagatgatatggagcgagagcgatattacacaaacttgatcaatgatgagagcaaccattttggctcgagtgagatgggaagccagtatgatgatgaacaagaaccagttgtgaatgaaaatgttgctgtgagaccgaaccaaaaaagatcaaaaaatttcagtttggaggaggacaatcttttggtgtcggcgtggataaatgtttctttcgatccggttcaagggacggatcaatctcacggtacatattggggacgtattcatgactactttcatcagaacaaggaattcgaatcagatcgctcccaaagttcacttgtacatcgttggtccactatacaagaacatgtcaataagtattgtggtttcttaagtcagattcagaatcgaaatcagagtggtgtcaatcatgaggacatggtaatatattgcttgtgttgcttattttccaatcgtctcctttatgtttctgacttcagttcatttatttgcagcatgtgcaagcaagcctgatgtacaagaagaaagaggaaaagaagtttcagttcatgcattgctacaacattttaaagaatctgccaaagtgggatgataagcggaatcagctggcagctagtaaaacttcaagcaagaagcagaagaagaccgccaatgattctcctgcgatatctactcctgcatgtaatgttgatgagaatagggctgctgatcctgagaatacagtaggtgagggaagacccatggggaggaagaaggcgaaacaacagatgcgcgaacgctcggatctatcacggaaagagtccttagactatctatgggataagaagaaagaggccgatgcggagaaggagcgaaagtttgaggagaggtaccaaattgcttttgcacttgagcaaaagcggattgatttggagagagacaagttcgagttcaagagaatgacaaaagaagataagcttttgaggactgatactagtgcaatgagcatcgaggagcaggagtactataaaaatgtgaagaatcaaattctaagtcgtcgttcagctcaagcataaattagtcttattactcatcaattagcattcaaaatttgttagatctttagctatagagtctacttaatggactagtaaattttactatcttgttttggtactgttttatgtagccggagcatttgctactactacaaaattgctggaaattgtttttttgttcaaaattgctggaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0228500, RefSeq:Os12g0228500