Os12g0257000

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0257000| Description = Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase C)| Version = NM_001073042.1 GI:115488045 GeneID:...")
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Gene Name

Os12g0257000

Description

Serine carboxypeptidase I precursor (EC 3.4.16.5) (Carboxypeptidase C)

Version

NM_001073042.1 GI:115488045 GeneID:4351908

Length

4876 bp

Definition

Oryza sativa Japonica Group Os12g0257000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8828741..8833616

Sequence Coding Region

8828961..8829044,8829244..8829289,8829490..8829603,8829838..8829959,8830053..8830118
,8830560..8830811,8830899..8830979,8831233..8831334,8831413..8831450
,8831537..8831639,8831734..8831856,8831958..8832034,8833135..8833280
,8833395..8833573

Expression

GEO Profiles:Os12g0257000

Genome Context

<gbrowseImage1> name=NC_008405:8828741..8833616 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:8828741..8833616 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaggcgcggccgccgctcccttgcttcgcccgccgttgccatcgcccttttcgtcttcctcgcctacggcggcggcggcggcggcggcggagtatgcgaggccgcgccggcgagcgcggtcgtgaagagcgtcccgggattcgacggcgccctcccgtcgaagcactacgccgggtacgtgacggtggaggagcagcacgggcggaacctgttctactacctggtggagtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggctgctccagcttcgacggcttcgtctacgagcacggaccattcaatttcgagtcaggagggtcagccaagagcctaccgaagcttcatctcaatccctatagctggtccaaggtatccagtgtgatctacttggattcccctgctggtgtggggctgtcatactccaagaatacttcggattataacaccggggacctcaagaccgccgcggattcgcatacttttcttctgaagtggtttcagctgtaccctgagttcctgagcaatccattttacatagctggggagtcgtatgctggggtttatgttcctactctttcgcatgaagttgtcaaaggattacatgatggagtgaagcctacaataaacttcaagggctacatggtcggaaatggtgtttgcgacactgtttttgatggtaatgctcttgtgccatttgctcatggaatggctctaatttcagacgatatataccaggaagctcagactgcatgccacggaaactactggaatactaccactgataaatgtgaaaatgcactctacaaagtcgatacgtcaattaatgacctaaatatttatgacattcttgagccatgctaccacagcaaaactatcaagaaagtgaccccagcaaataccaaattgcccaaaagtttccaacatcttggtacaactaccaagccccttgctgtaagaacaagaatgcatgggcgtgcttggcctctgagagctcctgtgagagcggggcgtgtgccatcctggcaggagtttgccagaggatctcgccccagtggagttccttgtatgagtgatgaagttgcaacagcatggctgaacaacgatgacgtcagagcagcaattcatgcccaaccagtaagctcaattggctcgtggcttatatgcaccaacgtgttggatttcatccatgatgctggaagtatgatcagttatcacaagaacctcacaggccagggttatcgtgctttcatatacagtggtgatcatgatatgtgtgtaccttataccgggactgaagcatggaccagatctttgggctacggagttattgattcatggagaccgtggcacctgaatggccaagtttctgggtacacccaaggatatgaacatggcctcacctttgctaccattaagggtgctgggcacactgttcctgaatacaaaccacaagaatcattggctttctatagccgctggcttgctggttctaaattgtaa</cdnaseq>

Protein Sequence

<aaseq>MARRGRRSLASPAVAIALFVFLAYGGGGGGGGVCEAAPASAVVK SVPGFDGALPSKHYAGYVTVEEQHGRNLFYYLVESERDPAKDPLVLWLNGGPGCSSFD GFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYNT GDLKTAADSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEVVKGLHDGVKPT INFKGYMVGNGVCDTVFDGNALVPFAHGMALISDDIYQEAQTACHGNYWNTTTDKCEN ALYKVDTSINDLNIYDILEPCYHSKTIKKVTPANTKLPKSFQHLGTTTKPLAVRTRMH GRAWPLRAPVRAGRVPSWQEFARGSRPSGVPCMSDEVATAWLNNDDVRAAIHAQPVSS IGSWLICTNVLDFIHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLG YGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYSRWLAGS KL</aaseq>

Gene Sequence

<dnaseqindica>4573..4656#4328..4373#4014..4127#3658..3779#3499..3564#2806..3057#2638..2718#2283..2384#2167..2204#1978..2080#1761..1883#1583..1659#337..482#44..222#ggtctccactgcgccacgctgctgccgaccacccgcaccatcgatggccaggcgcggccgccgctcccttgcttcgcccgccgttgccatcgcccttttcgtcttcctcgcctacggcggcggcggcggcggcggcggagtatgcgaggccgcgccggcgagcgcggtcgtgaagagcgtcccgggattcgacggcgccctcccgtcgaagcactacgccgggtacgtacgcgcgcctccgccccccgcgccgtcgcgccgcgcgcgcgcgcttgctggcttgctgctgctaacatctactagctcgtgtcgtgtggcggcggcggcggcgtgcaggtacgtgacggtggaggagcagcacgggcggaacctgttctactacctggtggagtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggctgctccagcttcgacggcttcgtctacgagcacggtgcgtatatcccatccacacacacacacctcctgccccctcgccgtcgccggagctagcctccggccgcggcgcgttgcggcggcgagtcgtctcgtcgtggttgagggcttgaggctggcggccgcagctcgccgtggaaggaaggggaggtggtgggccccgctgcttttgctttcgattattatattcgatggccttttcaccacaaatcgcgtaaaaagctgcagcgtagttgagatttgagcttctattttgatttgttctgttttttttagccaaacaaaaaagaagaatctctgatctgagtctgcactctgcacacggctgttgcgtgcaactgactgttgtgacccccttctagattggtttttttcccgagggagtacatcattggataatggataaccaaatactttctctgttccaagaaaaaaattaacctcgtacattatgcgacacattctgatacaatgaatttgaatatactctatatttagattcgttatattaggatatgtcacatcctagtattatatttccttttttaggatgaaggtgtgacatattctagtactatgaatttagacatagtatgtccagattcatagtagtaggatgtatcacatcttatcctaaattcactttttatgagacggaggtagtatttctatcaccgcaagaattgacttatttagttgggaacttggttgacacgataatggattatctatagttgatttttagatatatacttatatgttaaaacattttaggaaataaataataaatagttttaaacaagtggtttaagaaatacagtacacaaattcttttctatttgagaaattatattgttaaaaacgtggagtaaataatctaccacaataatttggtaaataagctgaaaagaacaactcacacagtggcgttcatctctatatcattttcatttttaatatctcagtccttcaagaagagaagtcttcattttgtttaattccagccttaacacaactggttgatggggcttgatgattcgtgtggttgaacctgatcattattatgcaccagttcatatgtgtgcgtgtgctttccaggaccattcaatttcgagtcaggagggtcagccaagagcctaccgaagcttcatctcaatccctatagctggtccaaggttggccatgcccatatatctattggccctgcatacataatgagctgaaattttctgttgtctgaatgagactggtgatatttttctgtgtgtgagcttaggtatccagtgtgatctacttggattcccctgctggtgtggggctgtcatactccaagaatacttcggattataacaccggggacctcaagaccgccgcggattcgcatacttttcttctgaaggtactatatatgtgtgttctataattttcagtatggtgaattaaaatcatctgcctgtgcaagatagctgaattttgttatatcttgtcagcagtggtttcagctgtaccctgagttcctgagcaatccattttacatagctggggagtcgtatgctggggtttatgttcctactctttcgcatgaagttgtcaaaggtatttttctttgagttaggattgttctcatgttgcaacaattaacacacatcttatggtcttgttttttatgaattgttatgcaggattacatgatggagtgaagcctacaataaacttcaaggttacatattgatcaatggaagttttctattaggaggtctatagtttaacatgtatctaatttggatttgaatgtcagggctacatggtcggaaatggtgtttgcgacactgtttttgatggtaatgctcttgtgccatttgctcatggaatggctctaatttcagacgatatataccaggtaagtccactattcagattgaaagccccatttcagtaatatttcccctacacattatgagaaagaatcagagtacccttttttcatattctatggatttttttccccaaaagttgttttttcggttccattgatctttaggagatcacttttatatatgtacttctgcacacaatttcaaacagactctactttggaatatgattgaatggactaaacaccatttacacaattctatgtattcaaaattcaggaagctcagactgcatgccacggaaactactggaatactaccactgataaatgtgaaaatgcactctacaaagtcgatacggtaataaaccgccgtgttacttcatctgattaaagatatcattgaatcaacgctgttctccttatgatataccttgttcttgtgcagtcaattaatgacctaaatatttatgacattcttgagccatgctaccacagcaaaactatcaagaaagtgaccccagcaaataccaaattgcccaaaagtttccaacatcttggtacaactaccaagccccttgctgtaagaacaagaatgcatgggcgtgcttggcctctgagagctcctgtgagagcggggcgtgtgccatcctggcaggagtttgccagaggatctcgccccagtggagttccttgtatggtaagctcaatatctctcgattctctcccaaaagaaaaatgtggacagatgtgtagctatgaatctggacagatgtgtaatgtgtcctggttcatagctaggaattcttttttttttcttttttggacggagggtgtattttctagtggtatgtgagattgcgagaatggtatgttgcagtcttgcagaaatattggtccattttgtgctaacatggaaagtatgcattgatatttttataccttcctttccaacaaagaaatccctgacttatatttaaatatgactgctaagagcatgttcaacagtcattaataagaggctcttaaccttgacaactacacatgtttttataatttacagaagaatttctggaagaatgcctgatgcattcatggaggactttattaactgacagcctctaatttgcttaaactgcagagtgatgaagttgcaacagcatggctgaacaacgatgacgtcagagcagcaattcatgcccaaccagtatggcaatcatttagtgacgacccagaattagatagaattttacaatattttcatcttacaactttaatttattacatacgctcatgataggtaagctcaattggctcgtggcttatatgcaccaacgtgttggatttcatccatgatgctggaagtatgatcagttatcacaagaacctcacaggccagggttatcgtgctttcatatacaggtccgacatgtgcctataaaaacgatgttttcacaaaaaaaatttcctaccctattgattggttatggatcttagagggaacgtccttattaacttctgaattataaaaaatagcttttcgcaggtgggaaaaaggcgaattttgtgccagctttttttatttcacatcctatactcttagaaaagaaagtgtgattccaatggtcatggcattttgttttatatttgttacagtggtgatcatgatatgtgtgtaccttataccgggactgaagcatggaccagatctttgggctacggagttattgattcatggagaccgtggcacctgaatggccaagtttctgggtattaatcacacgtatccccaaattttactagttgaattattaccctcagagtaaatttactcaacagctgctatcattgcttttatgaaaggaaaccaaaagattctaattggattttatttccagaaactcaaactatataaatatatatgatattcatcggtcagtctacttatattatattatgtaactcgtcaggtacacccaaggatatgaacatggcctcacctttgctaccattaaggtgagtatacatttctaaccagggcatcacaattaaggtcaaaatgaatgtaatatggtttgattacccacttaagtaagaagaggacacaatatataaactaatatgattgtatcattcaaacacaaaaaatctaaaaaattgaggttgaattgcatttaactttgtttccttcccttttctttttctttgtttgcagggtgctgggcacactgttcctgaatacaaaccacaagaatcattggctttctatagccgctggcttgctggttctaaattgtaaatgcttgtgaatccgacatccaataatgggaagcatacatatccatacagccatgaatcagataaaggttgatacaaagataatataaaaaaactacaaaccaatttagaaagccacatttatttcagaatagttggtgccaacaccatgttgtatgttcttttatgcaaacagtagatcattcatcattatttgtggaagcttactgtgctgtaacatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0257000, RefSeq:Os12g0257000