Os12g0257600

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0257600| Description = Cupredoxin domain containing protein| Version = NM_001073045.2 GI:297612957 GeneID:4351911| Length = 4496 bp| Defin...")
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Gene Name

Os12g0257600

Description

Cupredoxin domain containing protein

Version

NM_001073045.2 GI:297612957 GeneID:4351911

Length

4496 bp

Definition

Oryza sativa Japonica Group Os12g0257600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8868490..8872985

Sequence Coding Region

8870078..8871076

Expression

GEO Profiles:Os12g0257600

Genome Context

<gbrowseImage1> name=NC_008405:8868490..8872985 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:8868490..8872985 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcttgtgaatacaacgtatgcgtactaagtttatttatttttggacggatagatatttattttggatggatagataacattcttcttttgggccatgacgtacgcaggcacggcgtgttccagcgcgggtcgcagtgggccgacggcccatcgatgatcacgcagtgtcccgtgggccccagcgacaactacacctaccgcttcaacgtcagcgaccaggagggcaccctatggtggcacgcccacatctccttcctccgcgccaccgtctacggcgccatcgtcctcaacccccgcgccgccgccccgttccccgccaagcccgacaccgagcacgtcgtcctcctcggcgagtggtggaacgccaacgtcgtcgacctcgagcgcatggcgttcctcaccggcatccccgcacggaacgccgacgcctacaccatcaatggcaagccgggcgacctgtacaactgcaccgccgcgaaccagacggaggtgttccgggtgcggcgcaacgagacgcacctgctacggatcatcaacgccgcgctcaacacgccgctgttcgtcaaggtggcggggcatgggttcacggtggtggccgtcgacgcgagctacaccacgccgtacgccaccgacgtggtggtgatcgcgcccgggcagacggtggacgcgctcatggtggccgacgccaacgccaccgcgtcgcccggtgggaggttctacatggcggcgacgccctacgacagcgccgtcccgagcggcccgcccttcagccagaccacggcgacggccgtggtggagtacgtcggcgaggcggacgacgccgtgccgccggtgctcccggcgcggccggactacaacgacacggccacggcgcaccggttctggtccaacctcaccgcgctggtgctcccggggaagcccacggtgccgctcgccgtcgacacccacatgttcgtcaccgtcgggctcggcgtctccgactgccagccggcgtgttag</cdnaseq>

Protein Sequence

<aaseq>ACEYNVCVLSLFIFGRIDIYFGWIDNILLLGHDVRRHGVFQRGS QWADGPSMITQCPVGPSDNYTYRFNVSDQEGTLWWHAHISFLRATVYGAIVLNPRAAA PFPAKPDTEHVVLLGEWWNANVVDLERMAFLTGIPARNADAYTINGKPGDLYNCTAAN QTEVFRVRRNETHLLRIINAALNTPLFVKVAGHGFTVVAVDASYTTPYATDVVVIAPG QTVDALMVADANATASPGGRFYMAATPYDSAVPSGPPFSQTTATAVVEYVGEADDAVP PVLPARPDYNDTATAHRFWSNLTALVLPGKPTVPLAVDTHMFVTVGLGVSDCQPAC</aaseq>

Gene Sequence

<dnaseqindica>1589..2587#aacaaatcttctgtttcatatgatcacaagagctaattaaattgtctctgtgcatgcacttgtgtttgctgcactacgacacatgcacaagcttgtgtaaggacaacatggcttgttgttcttctctcctccggctgatgattctgccggttgcttttgctgtcttggtcatcgcttcggttgctcatggcgctgttgtggagcacactttcaatgtaagtgtccatgtatatatatattgtttcatcatcttcttgcgatttaggcatttagctcaagtagatacatgattttcatttctatcttctactgtaaataagaaagctagtggtggtggtgctagctagtttgtcatcgtaccactacacccctttagttgatcggatcttcagttgataactagattgtttacgatgatgatgataagaaaatagtttcggacttgacgtgtgattaaaaattatacattccttttcttagcccatatactagttatttaaaggaaaaaaagcgtatgaatttattaactcaaatatattatcgaagcactttacacttattaatttattccccaattatacttcgcccatcttgtttgttcctataggaagcatgttatgagttaaattttgtagaatggtcatgaaaatatccatgtcacaaaatgttttgaaaaaatttcattattgtttgtatggatgaattttaaattatgtagattaaattagtcttaggtgcttccaatctacgaagataaggagttgagaagctaagatataatgtgatctagcaccctacaaaattgaaacttaaaatacagcatgcataaggagaaatgaaacataaaaaataaattcaacggaataagataagaggtctttcagtagttgcagggttaattaaagtgagtaaaaaaatagatcagaatttttaagtgctcttgaaaatgttcttattccttataggaggaggtaatgacagtgaaatagaaccttttgtattaaaaatcgtagcaaaacttgggtattaatgtttcacatattggaatgagctaacgaacctagcttgttagtaatgtttccgtccctatgttcagattttgtctacaaaagttgatttattttagaaaaggagagtattgagaaaccggtttaactcacgtgtctaagtcctacaatttgctcagtaatcaatcagtagcatatctactccatttttttttaccctgtcaccatcttaattcttaagcaacaaagaacaataggcatgctgcagtagtgattttttgctaataattgttttactggcggtctgcatcgtccaggtgggcaacctatccataagccggctgtgccaaccggagatgatcatcacggcggtgaacgggcagctccccggcccgaccatcaacgtcaccgagggcgacacggtggtggttcacctcgtcaatgagtcaccctacaatatgaccattcactggtactacctattacctacaactactgtaaatttgttcaaatttcaccttttcaatatccaaaattcttatagaacttcatctccaattgcttccctctttattttctgagcttgtgaatacaacgtatgcgtactaagtttatttatttttggacggatagatatttattttggatggatagataacattcttcttttgggccatgacgtacgcaggcacggcgtgttccagcgcgggtcgcagtgggccgacggcccatcgatgatcacgcagtgtcccgtgggccccagcgacaactacacctaccgcttcaacgtcagcgaccaggagggcaccctatggtggcacgcccacatctccttcctccgcgccaccgtctacggcgccatcgtcctcaacccccgcgccgccgccccgttccccgccaagcccgacaccgagcacgtcgtcctcctcggcgagtggtggaacgccaacgtcgtcgacctcgagcgcatggcgttcctcaccggcatccccgcacggaacgccgacgcctacaccatcaatggcaagccgggcgacctgtacaactgcaccgccgcgaaccagacggaggtgttccgggtgcggcgcaacgagacgcacctgctacggatcatcaacgccgcgctcaacacgccgctgttcgtcaaggtggcggggcatgggttcacggtggtggccgtcgacgcgagctacaccacgccgtacgccaccgacgtggtggtgatcgcgcccgggcagacggtggacgcgctcatggtggccgacgccaacgccaccgcgtcgcccggtgggaggttctacatggcggcgacgccctacgacagcgccgtcccgagcggcccgcccttcagccagaccacggcgacggccgtggtggagtacgtcggcgaggcggacgacgccgtgccgccggtgctcccggcgcggccggactacaacgacacggccacggcgcaccggttctggtccaacctcaccgcgctggtgctcccggggaagcccacggtgccgctcgccgtcgacacccacatgttcgtcaccgtcgggctcggcgtctccgactgccagccggcgtgttagcaataatcttgtctttagagtgtatgcatttggtttgtataggttttgcacaaggtagtagtgtgtggcagcaaaggatccgagccagtacgtgtgaaacgtgcttgctgtgagctgtgcgatgcggccggacgaacgtgccgatatctacgatgtgtaaaggctgttgcattagcatgtagaactagtgattagcggctgcatgcaagcatttagttggatgtgttaagatgcatgcagagctgcagctcaagctggaaggccacgaagtgattttgtggcggaagaataggtctagctagttaccttgttgcatggcatctgcatgttggagtaaggcgtgagtcaaggccaaattagttggctgatccttatcttttgcatgtacttaagtctatgtaatgaagaaaatggtgtgagttgtgattagccacatcaaccaaaagcctgtgtgttttgttcagttcttgtgtgtttgtgtccaccgagtaaatacaagtgtttatgttagtgctagtgattagtacttaaacattcagagaggagagattctaacaattggtatcagagccaatttatgcccaagatcctgcgcttcaacaagatggccatcgtcgagcactccgcatcgcgatcgatgagggagggcatcgtgtcgctcccatatccagtgctcacctccaccaactactccacctgggcgatcaagatggaggctaacatggaggcgcaaggcatctgggatgccatcgagcccgcggccgatgaggccgtggacattaagaaggacaagcaggcacgtgcgtgtctcttcggggccgtccccgaagacgtgttgcagcagatcgcgaagaagaagactgccaaggaggtctgggaaagcctcaagacgaggttccttggcgttgagcgtgtgaagaaggcgcgagtgcaaaccttgaagagcgatttcaaggcattgcacatgaaggacaccgagtcaatcgacgagtttgccggcaaaatcagtggcctggcaaacaagttgagcgatcttggtgtaaccatggacgatgatgagcaagtcaagaaactactcgattctgtgccagataagtttctgcatgtcatcgctgcaattgagcagttctctgacttggacagcatgccatttgatgaggcaattggtcgcctcaaggcatacgaggaaaggatacgcaagcgtgatgacaagaatggcgagcatctacttttcacgtccggcgacacaagcggtggccgcagccgcgtcaagaagccggacaggtccaagacaatgtgctactactgtcaagaacttggacactttgcgtatgagtgccctgagaaaaagaagaagaaggagatagcgctccttgccgcagcgtcaagtgatgaggagccaactcttctctgaatgaagcatgccaagattaggggggtaaatgttagcaataatcttgtctttagagtgtatgcatttggtttgtataggttttgcacaaggtagtagtgtgtggcagcaaaggatccgagccagtacgtgtgaaacgtgcttgctgtgagctgtgcgatgcggccggacgaacgtgccgatatctacgatgtgtaaaggctgttgcattagcatgtagaactagtgattagcggctgcatgcaagcatttagttggatgtgttaagatgcatgcagagctgcagctcaagctggaaggccacgaagtgattttgtggcggaagaataggtctagctagttaccttgttgcatggcatctgcatgttggagtaaggcgtgagtcaaggccaaattagttggctgatccttatcttttgcatgtacttaagtctatgtaatgaagaaaatggtgtgagttgtgattagccacatcaaccaaaagcctgtgtgttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0257600, RefSeq:Os12g0257600