Os12g0263000

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0263000| Description = Similar to Homoglutathione synthetase GSHS2 (EC 6.3.2.23) (Fragment)| Version = NM_001073055.1 GI:115488071 GeneID:43...")
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Gene Name

Os12g0263000

Description

Similar to Homoglutathione synthetase GSHS2 (EC 6.3.2.23) (Fragment)

Version

NM_001073055.1 GI:115488071 GeneID:4351923

Length

3218 bp

Definition

Oryza sativa Japonica Group Os12g0263000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9262823..9266040

Sequence Coding Region

9263065..9263188,9263266..9263458,9263537..9263676,9263802..9263923,9264012..9264081
,9264166..9264246,9264460..9264540,9264612..9264734,9265336..9265466
,9265591..9265666,9265900..9266012

Expression

GEO Profiles:Os12g0263000

Genome Context

<gbrowseImage1> name=NC_008405:9262823..9266040 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:9262823..9266040 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcattttcgaaagtttactgggatcaggcggttgaattggctccccttttcaatgagcttgttgatcgtgttagtttggatggggattttttgcaggagactttggcaagaacgaaagaggtggattcattcactggaaggcttcttgatatccatgcaaagatgatgaaactaaacaagaaagaggatgttaggttgggtcttactaggtcagattacatgattgatggggccactgaccagcttcttcaagttgaactcaacaccatttcaacatcatccaacggtcttgcttgcggtgtatgtgaacttcacagaaacctgattaggcagcatgagagggagctcggtttggatccagagagtgttgttgggaacacagcaattgctcagcatgctgaagcattagctggagcatgggctgagttcaacaatcaaagttcagtagttctggtggttgttcaaccagaagaaaggtacatgtatgaccaatattggataactgtcgccttgagagaaatgtatggggtgacgacaattcgcaaaacaatggctgcaatagatgcagaaggagagctccgtcctgacggtacactaacaatagatggattgccagttgctgttgtgtacttcagagcaggttatacaccaaatgattacccttcagaagcggaatggagagcaagactcttgattgagtgttcctctgctattaagtgcccatcaatagcacaccatcttgttggaaccaaaaagattcaacaagaattggcaaaagaaaatgtgctcgaaaggtttcttgacaacaaagccgacatagaaaaagttcggaaatgctttgcagggctatggagcttggagaatgacagtatagtcatgtctgctattgaatcaccagaattgtttgttctgaagccacaaagagagggtggaggaaacaacatttatggggacaatctgcgtgaaacactgataagtctgaagaaggatggaagcaatgaacttgcagcctacatcctaatgcagaggatctttccaccagcatcactctgctatctagtccgagatggcacatgcattcgggaaaatgcggtttctgaatttggaatttttggagcctacctgcggaacaaagacagggtcattataaatgaccagtgtggttatttgatgagaaccaaggctgcctcactgaacgaaggtggggtagttgctggatacgcatttttgaacagcgtattcctgacatga</cdnaseq>

Protein Sequence

<aaseq>MSFSKVYWDQAVELAPLFNELVDRVSLDGDFLQETLARTKEVDS FTGRLLDIHAKMMKLNKKEDVRLGLTRSDYMIDGATDQLLQVELNTISTSSNGLACGV CELHRNLIRQHERELGLDPESVVGNTAIAQHAEALAGAWAEFNNQSSVVLVVVQPEER YMYDQYWITVALREMYGVTTIRKTMAAIDAEGELRPDGTLTIDGLPVAVVYFRAGYTP NDYPSEAEWRARLLIECSSAIKCPSIAHHLVGTKKIQQELAKENVLERFLDNKADIEK VRKCFAGLWSLENDSIVMSAIESPELFVLKPQREGGGNNIYGDNLRETLISLKKDGSN ELAAYILMQRIFPPASLCYLVRDGTCIRENAVSEFGIFGAYLRNKDRVIINDQCGYLM RTKAASLNEGGVVAGYAFLNSVFLT</aaseq>

Gene Sequence

<dnaseqindica>2853..2976#2583..2775#2365..2504#2118..2239#1960..2029#1795..1875#1501..1581#1307..1429#575..705#375..450#29..141#gctccatgccccatttgctctactgccaatgtcattttcgaaagtttactgggatcaggcggttgaattggctccccttttcaatgagcttgttgatcgtgttagtttggatggggattttttgcaggagactttggcaaggtgatttcttaaataattgacataaataaaattatatgttttcaaactctcgggaaaaaccatactaacaaaaaaattatattacctaagttcaccaaaaaagttataactacattatttagaaactacagattaccctagtcttgaagttctgaaccatcggtttcaattcttgagtactttgtgttttcatcgtgttattcttgtaacagttttagtttatcattttccagaacgaaagaggtggattcattcactggaaggcttcttgatatccatgcaaagatgatgaaactaaacaagaaagaggtgaccacgcagcttattttgaaatatactaatcaatgaggaattcaacactctgataattattatagcattgattttattaatttttttgaaaaaaaaaattgaactgtattatatctttcaggatgttaggttgggtcttactaggtcagattacatgattgatggggccactgaccagcttcttcaagttgaactcaacaccatttcaacatcatccaacggtcttgcttgcggtgtatgtgaacttcacaggttagacaagctaaaacacagatggacaccaaatgtatttgattcttcttattaaccatgcattcacacatttttcagacaagctaaaacattgaaatataagtttgctgccctgaacagaatctggacacatcgttaagattggaagttcagagtcatgaaaaagtagcttcctcatttcttatgcacccatgggttatatggaaaatatatagtataaaccatatatttagggaaaacctagaaactcctgtagcattcaaaaatgaacatttgagatttgtgatggataaatctcagaagtccatttttgtaatcttatggtagtttttaagtttccaatacatattttcccagattattctatgatttttaggcgtcatgacttcaaatatgtatatatagaccagccagtttgctcgattttgcatgcagaaagaaatttaatttaatatatcgaagtagtttaataagtttggcaacttaagttgtattcttggcatgctatttatccttttgcccacttttattgtattattgtataataaattactgacaccaaaatttatataacaaagaacaacctggatgtaatgtgcagaaacctgattaggcagcatgagagggagctcggtttggatccagagagtgttgttgggaacacagcaattgctcagcatgctgaagcattagctggagcatgggctgagttcaacaatcaaaggttgtaagctgttatgcatgacctttcttatgcatgactactctttactaactaaagttttggtcatccagttcagtagttctggtggttgttcaaccagaagaaaggtacatgtatgaccaatattggataactgtcgccttgagagaaatatatccttgggtgctttcaagaatcaaagaaactgttaactattgctgatttctgaaattttgtaactgtccaattttgtgacatccttgagtgggcaaagctgatttgatagctgaaaaatgcttcagtgtttactggtttaaccatgtatttaaccaaaatatccacccagcaattaaacaaaaaatagtttcccttaacttcgttttcacgtatggggtgacgacaattcgcaaaacaatggctgcaatagatgcagaaggagagctccgtcctgacggtacactaacaatgtaaggattctcctgcagaaatttggatataatgtcacgttacacgatttcagactatcgaacatgatttattttctcatgtagagatggattgccagttgctgttgtgtacttcagagcaggttatacaccaaatgattacccttcagaagcggtatgttattaatcatcttcatccgttcattttacttatccagaaattaaccttcctatctctcacttctctctgtattttttctaaggaatggagagcaagactcttgattgagtgttcctctgctattaagtgcccatcaatagcacaccatcttgttggaaccaaaaagattcaacaagaattggcaaaagaaaatgtgctcgaaaggtaatttacattggggaacatgatattctttaaaatctatagttttttatgcctaacaaaggctcatatttttaacatgtcagttaatctgattttgtgtgaacttactacaattcctactataggtttcttgacaacaaagccgacatagaaaaagttcggaaatgctttgcagggctatggagcttggagaatgacagtatagtcatgtctgctattgaatcaccagaattgtttgttctgaagccacaaagagagggtggaggtaccctgctatcttatatactttgccttcaaattatctgcattggtatctaatgagaaactcttgtgtttcattcaggaaacaacatttatggggacaatctgcgtgaaacactgataagtctgaagaaggatggaagcaatgaacttgcagcctacatcctaatgcagaggatctttccaccagcatcactctgctatctagtccgagatggcacatgcattcgggaaaatgcggtttctgaatttggaatttttggagcctacctgcggtaataaatcgtaaaactgaagtaagaagccatattatgtattggatatacctcaaattttggcctctgaatttcaggaacaaagacagggtcattataaatgaccagtgtggttatttgatgagaaccaaggctgcctcactgaacgaaggtggggtagttgctggatacgcatttttgaacagcgtattcctgacatgacatggtaagacatgcgaaacatgtgtatcggtttgaatatggataattctccaagcaggttatcagagaattcataatttgtatgctattacttttagcaggaatcataccaatgttatttccatgacacacttttttttatttggcatgatttcgctatcagccgagattgaggtaccattattcccatgtataaaaatgttatagctatcatattttaatgtatgagtatcaatttgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0263000, RefSeq:Os12g0263000