Os12g0265100

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0265100| Description = Similar to Pinoresinol-lariciresinol reductase TH2| Version = NM_001073063.1 GI:115488087 GeneID:4351932| Length = 3...")
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Gene Name

Os12g0265100

Description

Similar to Pinoresinol-lariciresinol reductase TH2

Version

NM_001073063.1 GI:115488087 GeneID:4351932

Length

3325 bp

Definition

Oryza sativa Japonica Group Os12g0265100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9396126..9399450

Sequence Coding Region

9396362..9396525,9396864..9397067,9397811..9398051,9399094..9399429

Expression

GEO Profiles:Os12g0265100

Genome Context

<gbrowseImage1> name=NC_008405:9396126..9399450 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:9396126..9399450 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggagaagagccgggtcctcgtcgtcggcggcaccggcttcgtcggtcggcgggtcgtggcggcgagcttggcggcgggccacccgacctacgtcctgctccggccggagatcggcctcgacatcgacaagctccagatgctgctggccttcaaggcgcggggcgcgcggctcctcgaggcgtcgctcgacgaccacgacggcctcgtcgccgccgtccggcaggcggacgtcgtcgtctccgccatgtccggcgtccacttccgcagccacaacctcatgctccagctcaagctcgtcgaggccatcaaagatgctggaaatgtcaagcgattcctgccatctgaattcggcatggatccatcaaggatgggggacgctctagaacctgggagggtttcatttgatgagaagatggtgataaggagagcaattgaggatgcaaacatcccccacacatatgtttctgccaattgctttgcagcttacttctgtcctaacctctgtcagatgaaaactctcctccctcccaaagagagagttggtgtgtatggagatggcaacgtcaaggtgtttttcgtggacgaaaatgatgtgggaacatatgcaataaaatcaatcgatgatcctcgcaccttgaacaagacaatatacataaggcctcaagataactgtctcactcagaacgagttgatctcaaagtgggaaacactcactgggaaaagtcttgagaaattccacatacctggtgatgaatttttggcttctatgaaagatttggattttgctagtcaagtaggaataggacattattaccacatcttttacgagggctgcctggcaaacttcgagattggtgacaatggtgccgaggcaactcagctctacccagaggttcagtacacccgcatggatgagtacctgaaacgctatatctaa</cdnaseq>

Protein Sequence

<aaseq>MAMEKSRVLVVGGTGFVGRRVVAASLAAGHPTYVLLRPEIGLDI DKLQMLLAFKARGARLLEASLDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLV EAIKDAGNVKRFLPSEFGMDPSRMGDALEPGRVSFDEKMVIRRAIEDANIPHTYVSAN CFAAYFCPNLCQMKTLLPPKERVGVYGDGNVKVFFVDENDVGTYAIKSIDDPRTLNKT IYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGDEFLASMKDLDFASQVGIGHYYHI FYEGCLANFEIGDNGAEATQLYPEVQYTRMDEYLKRYI</aaseq>

Gene Sequence

<dnaseqindica>2926..3089#2384..2587#1400..1640#22..357#tgtcagagagctgagggagccatggccatggagaagagccgggtcctcgtcgtcggcggcaccggcttcgtcggtcggcgggtcgtggcggcgagcttggcggcgggccacccgacctacgtcctgctccggccggagatcggcctcgacatcgacaagctccagatgctgctggccttcaaggcgcggggcgcgcggctcctcgaggcgtcgctcgacgaccacgacggcctcgtcgccgccgtccggcaggcggacgtcgtcgtctccgccatgtccggcgtccacttccgcagccacaacctcatgctccagctcaagctcgtcgaggccatcaaagatgctggaaatgtcaaggtgataaatttatttttttttatggcaactcaactaattacataactagaggaacatgataataaatcatatagttagtaacttgtggtgatttttgttgacaggatttttttttactgaaatcagtttgtgttgttttactgacaataatttgtgcacatcataagtaaaaagttttgtcatatatagtaaatttacaagatagcctattttttccattgaattttgcttggattcttttttcactccaaattacaaaaccggttgtttttcatattcaactttcaaaacgggagaaataactcttcaactcatattttacagtggttaattgatatgatagtcttccagtggaagcaatctcatccgcatatgctttcatctttccaatgtactcagaaactgacatagtagtacctttttgagtgttggtgagagcgggcctgatgttgatggagcgtgcacgtgtttgggacccaaacaagtcaccaatcacctgccatgcctgcgctgaagattttgcaccggcgacctggcccagcatgtcacgagacagggacgagagcaggaacccaacaacttgtttttcatattcaactttcaaaagggagaaataactctctaggtcatattttacagtgcttaattgatatgacagttattttccgccaacatgaatttcagttaggtatattttaggattttataccaaattaagtgacatctacattagtaaaatatgaaaattaagagaccgaaataccaaaaccatctccatttgaaacagaaacataaaagatatatcccaaggtggtacttatccactttttaaagttgagagtgagaatataactggtttggtatttcaggatgaaaggagcaatgttcaacagtccagaaaggactttgcccattcaagagcaacacactatttcctctaccccatatatagatatatagaacttatgcatatacactacatgatttttgcaaaatgctcatgattaacatatatttactgtgcataattatacgtgaccagcgattcctgccatctgaattcggcatggatccatcaaggatgggggacgctctagaacctgggagggtttcatttgatgagaagatggtgataaggagagcaattgaggatgcaaacatcccccacacatatgtttctgccaattgctttgcagcttacttctgtcctaacctctgtcagatgaaaactctcctccctcccaaagagagagttggtgtgtatggagatggcaacgtcaagggtaaattaacactagctaagctgttgtttcattgcattaatttccaggtgttgttttgtatttttctgccgggaacagttaagatttgcacccttttcctgttgaaaagttcagacttgtctttgaaaccaaacatcgaattgatcaactgtttaagactttgtgtgaccaagactgtggtgcttatgaagttatgattagcaattacctgttttggtaacaggtacaattatatattaatttttcagtcttgctcagttccaacttccaagtttgttggcactccgaaaccttcatttcatctacagtgtcttcatcttacaaatattttctgcctacattcccttgcatctactagtatttaacagagcataacaggattgctgcactctttttctctccactgtttaccaccttttccgcctgaaacttttcccgttgtaaataatgatgatttcttctctagttagttcaaaatagtatgtcctattaagatatttgtattatagtgaaaatgatcaaacaccaatttgtgttgcttcgtttacactcgacaagatttggtcaaactataggaattttctcgaaaacaaaactacaggaattaaggcctactgaaaactattcttcagtaatagtacaaccagaaatatatgaagtaaatataagtgcactacagaataatgcagagcatttgtttgaaatttgtactactgaccaagctgcaatattgctctatacagtgtttttcgtggacgaaaatgatgtgggaacatatgcaataaaatcaatcgatgatcctcgcaccttgaacaagacaatatacataaggcctcaagataactgtctcactcagaacgagttgatctcaaagtgggaaacactcactgggaaaagtcttgagaaattccacatacctggtgatgaatttttggcttctatgaaaggtacctggtcaaactagaatatgtgtttggctttttactgttttcgatgtacaattttgacaacaatttctattataaaaggtttataaaaatctaataactttacgggctacataagtccatctaaagaagatatacatatactatttttaagtttaaaactaagcattttaaaatttatcagtagttaaagttctaaaagtttgaaaaaaaaaactaagcatcctatatccgggttttttcgataccattactccagggatgaaatttcataacatatgtggtggtaaaaaaaacaatcaaatttacaactgatacgcaattgtcgatgtgtgcagatttggattttgctagtcaagtaggaataggacattattaccacatcttttacgagggctgcctggcaaacttcgagattggtgacaatggtgccgaggcaactcagctctacccagaggttcagtacacccgcatggatgagtacctgaaacgctatatctaaccggttcaaatttaaagcatctgcttgtcaaatttaaagattgtaatccgcaaatgagcatccctggtcgatcttcccctaccagaattgttcaacgacaatatgcctgctcgaatttatggtactagtagtctagtacatcccctcttgtttgttgactctgttgtactatcaagttggatgggtggaaagttcaaacgatggttagcatgttcatgttcagaccggtattttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0265100, RefSeq:Os12g0265100