Os12g0273300

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0273300| Description = Disease resistance protein family protein| Version = NM_001073087.1 GI:115488135 GeneID:4351961| Length = 4929 bp| ...")
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Gene Name

Os12g0273300

Description

Disease resistance protein family protein

Version

NM_001073087.1 GI:115488135 GeneID:4351961

Length

4929 bp

Definition

Oryza sativa Japonica Group Os12g0273300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10015753..10020681

Sequence Coding Region

10016245..10018222,10019574..10020238

Expression

GEO Profiles:Os12g0273300

Genome Context

<gbrowseImage1> name=NC_008405:10015753..10020681 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:10015753..10020681 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtgcaggtgaaggactggaggaacaaggtccgggaactgagctatgatatcgaggattgcatcgatttattcatgcacaaattgaatcgcggggatgataaggtcaacattgttctcaagatggcaaagaagattagaatgttatggtcaaggcatcagattgctaaccagatccaagaacttaaggctcgtgtcaaggaagagagtgatcgccgtttgaggtactacttcagcgagtgcaatgcacatgtcgacgggactaaaattgatccccgcctaccggcgctttatgttgaagaagagaagcttgttggtatccatggccctatggaagagatcattgaattgttgatgaaagaggatggttcggggcaaaaactcaaagtggtatccattgtgggttttggcggactcggcaaaactactctggctaaccaagtatacaacaaaatcaaggatcaatttgattgctcagcttttatatctgtttcgcagagtcctaacataaagaaaattttatttgatatgcttaaagatgtgaccagccgagacaactctgatgatgataagcaaattaaagttgttggggtcaaaggagataaatccgatgatgagaggcaactcattggtaagctcagagtattcctagagaataagaggtacttcatcattgttgatgatatctggagtgcatctgcatgggaacatgtgaggttagctttgcctgagaacagtctttgtagtagaataattacaaccacacggaatgtcaatgtggcaaaatcatgctgctctggttttcaaggttctgtttacaacattcaacctctaaatgagcaagactctaagaagctatttctgaaaaggcttttccactcagactccaattttcctactcacttggaagaagtttcacatgcaatcattaaaaagtgccatggctttccattagctattatctgtttagctagtctgctagctagtaaatctgatacaaaagaccaatgggagcaagtgcacaattctctcagttctgcgtttagttcacaagggatgagcgatatactgctgcttagctattatgatctaccctatcatctgaagacatgcttgttgtatcttagtgtatttccagaggattataagattgatagagatgaactgatatggagatggatagctgaaggtttcatcactgaagtgaagggtcaaacattggaccaagttggagggagttactttaatgagcttatcaacagaaacatgattcaaccaattgacatcaaatatgatggtaccgcaaatgcttgtcgagtacatgatatggtgcttaaccttatcatatccatttcatctgaggaaaattttctcaccgtagttgacgagcaagggtataaatatttgggtaataagattcgacggctctcattccagtccaactctgttgagaatgatgtgaatgtagttcaaaagatcatggacaacttgtcacaggttcgttcgctaagcttctttgaggtaccagagaaaatacctcctttcttaaaattccattcattgagtgtattggttttagtggattatgatttttgtcttggtaatggacacattaaataccttggaagttttttccaattgaagtatttgagagtcacttcttatggcattacccagctcccagatcaattcgggaacctccattatctacaaactctggatatacgtggcagtggaatcgaaaagtttccgccaaccgtggtccgtttgcataacttggctcgtctacttgttggcaataaagtgcaattgcctgatggtattggagatctgcaatccttacaggtgctgtcttctgctcggttgtataaacccctaaaacttgtggaagatctcaggagattgaccaaactaaggacgcttgagatagttcttcatggcagtgatacacttggtgctcatgagatgggaaggtatgaggaagctttggagtcttctcttactgtgttgggcaaacacaaaattcagtcactcgaaatttcatgttgtgattacttgagagataaattactggatttgttgtgctgcactgttccaaacattcagaagcttgtaatatctggcaattgcataaataggccttctcagcagatgctatctcttgttaatctcgctcacctagacatctatttccagaggattaagcaggaagatctcagtgtccttggaagcatatctactctgctctacctccggttgaaactgcattttgtgcctgacgaaaggctctgtatcagcagccaacaattccagagcctgatggagttcagattcatatattatgaggggggtggcttgaggatgttatttcaacaggaagcaatggcaaagcttcgacggttacagattcggtttagagcagaggaaatggagtctaatgcaggtttcgagttcagttttcatcacctctcaagcctggaggaccttcatgccacgattagttgttatagagccactagaagtagcgtggaggctgcagaagctgccatcaggaatgcagctagtatccatcctggacatctaaaagtttcaatcataagagagtgggaaagccgcatggcggggctcagagagagatga</cdnaseq>

Protein Sequence

<aaseq>MDVQVKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMA KKIRMLWSRHQIANQIQELKARVKEESDRRLRYYFSECNAHVDGTKIDPRLPALYVEE EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCS AFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFL ENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNI QPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPLAIICLASLLASKSDT KDQWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIW RWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLII SISSEENFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFE VPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFG NLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLPDGIGDLQSLQVLSSARLY KPLKLVEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALESSLTVLGKHKIQSLEIS CCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDIYFQRIKQEDL SVLGSISTLLYLRLKLHFVPDERLCISSQQFQSLMEFRFIYYEGGGLRMLFQQEAMAK LRRLQIRFRAEEMESNAGFEFSFHHLSSLEDLHATISCYRATRSSVEAAEAAIRNAAS IHPGHLKVSIIREWESRMAGLRER</aaseq>

Gene Sequence

<dnaseqindica>2460..4437#444..1108#tttttcgataaggggactcatctctcaagtgcactgcttctcttcgtctcttcccccatctccggcgagccgtactggtccaactccggcggccaacgacccctcaactaccagctgccccaaaactggatccgtcactgagttagttaccaaggtatatctccccctcattcatatcggcggccggcgacggcgagggtgagaaactgaatctgtacaccctgttcttgcccagcggcggcggtgaagagaaggggcagatggacggagcagcagtgagcgtcgccactggggtgatgggatccctccttgccaagctctctgcattgctgggagaagaacgcgggcttctgaaaggtgtcaagggtgacatcaggttcttgagagatgagctgagcaccatgaacgtctttctgatgaatatggccagtgtggaggagaacatggatgtgcaggtgaaggactggaggaacaaggtccgggaactgagctatgatatcgaggattgcatcgatttattcatgcacaaattgaatcgcggggatgataaggtcaacattgttctcaagatggcaaagaagattagaatgttatggtcaaggcatcagattgctaaccagatccaagaacttaaggctcgtgtcaaggaagagagtgatcgccgtttgaggtactacttcagcgagtgcaatgcacatgtcgacgggactaaaattgatccccgcctaccggcgctttatgttgaagaagagaagcttgttggtatccatggccctatggaagagatcattgaattgttgatgaaagaggatggttcggggcaaaaactcaaagtggtatccattgtgggttttggcggactcggcaaaactactctggctaaccaagtatacaacaaaatcaaggatcaatttgattgctcagcttttatatctgtttcgcagagtcctaacataaagaaaattttatttgatatgcttaaagatgtgaccagccgagacaactctgatgatgataagcaaattaaagttgttggggtcaaaggagataaatccgatgatgagaggcaactcattggtaagctcagagtattcctagagaataagaggtacaaacaaatatcattagctatctctttgattcattgcacgttaatctttagatcctagaaattagtaaatgtgaccctatcatttggtaatgttgtccttttatctatggcataatttttgacatgctagtttaagaccttgcagttataagtattacctgaatttcctgtgcaacagcaaattcttttttggtgcaacagcagatttatatagtcctacatatgtttgttataaatagagcctatttggttgtacaaatgcaataactgtttatggtgattctgctgtagtaaatacgcgggaaaatttaacatacatccgtaacagatcgattatacatcttcatttgcagtgttctttaagtcagagccaacagaacaagttttgtaacttatagatatttcccttttttttcctccaattactgagggagccaatatatattagcatgattttgtattaaaatttctatagatgcaactcagaattaatttataggatgccagtaatgggagggtcagttgtggattagaagtgctgtggccgtgcagcttgaacagttgtcttgtcttggtgtcacagcatcctctgctattggttgtaattagcttcattgcaaataagcattcctttttgatgagcattatgggcttcgtctggtttgaggatgtaaatgaccttttgttctgatctgactaacagaaaggatagaaagaaatagtagggtatggaccagagtgttatttcacaacttcttttgattctaaatggcattctcctaactgtactgttttaacagccccaacagcagtgtacaccatcatttctaatactaagaatgccagttttactcgaaatttacaaagaaaaatggagatccatgcataataaccaaaaaactgtgatagcatctgcagtttggatgtaatgtaaaaggaaaatacatgcaacattgcaattgaatgtaatgaaaaaggaaaatacatgaaacattgaaaatgtttgctggcagagaaatctgaatgtagtgtactagtgtttcatgagtgtgagaggcaccaagtgttagatatagatggctgccctgcacatattatattttctttttaaagttcgaggtgaagaatacttgattaaaattgagcgataaaatgtggtaatattgtatttataacactatatatgtgtattaaatttgtcttccagaagcgttccggataattaaaagtggcataaatatctaatatatacttttagagtggcataatatcttctgcagtacttctcatgagatgtatactgcatttttaagttaaggcagactaataatctcctacatgtacataggtacttcatcattgttgatgatatctggagtgcatctgcatgggaacatgtgaggttagctttgcctgagaacagtctttgtagtagaataattacaaccacacggaatgtcaatgtggcaaaatcatgctgctctggttttcaaggttctgtttacaacattcaacctctaaatgagcaagactctaagaagctatttctgaaaaggcttttccactcagactccaattttcctactcacttggaagaagtttcacatgcaatcattaaaaagtgccatggctttccattagctattatctgtttagctagtctgctagctagtaaatctgatacaaaagaccaatgggagcaagtgcacaattctctcagttctgcgtttagttcacaagggatgagcgatatactgctgcttagctattatgatctaccctatcatctgaagacatgcttgttgtatcttagtgtatttccagaggattataagattgatagagatgaactgatatggagatggatagctgaaggtttcatcactgaagtgaagggtcaaacattggaccaagttggagggagttactttaatgagcttatcaacagaaacatgattcaaccaattgacatcaaatatgatggtaccgcaaatgcttgtcgagtacatgatatggtgcttaaccttatcatatccatttcatctgaggaaaattttctcaccgtagttgacgagcaagggtataaatatttgggtaataagattcgacggctctcattccagtccaactctgttgagaatgatgtgaatgtagttcaaaagatcatggacaacttgtcacaggttcgttcgctaagcttctttgaggtaccagagaaaatacctcctttcttaaaattccattcattgagtgtattggttttagtggattatgatttttgtcttggtaatggacacattaaataccttggaagttttttccaattgaagtatttgagagtcacttcttatggcattacccagctcccagatcaattcgggaacctccattatctacaaactctggatatacgtggcagtggaatcgaaaagtttccgccaaccgtggtccgtttgcataacttggctcgtctacttgttggcaataaagtgcaattgcctgatggtattggagatctgcaatccttacaggtgctgtcttctgctcggttgtataaacccctaaaacttgtggaagatctcaggagattgaccaaactaaggacgcttgagatagttcttcatggcagtgatacacttggtgctcatgagatgggaaggtatgaggaagctttggagtcttctcttactgtgttgggcaaacacaaaattcagtcactcgaaatttcatgttgtgattacttgagagataaattactggatttgttgtgctgcactgttccaaacattcagaagcttgtaatatctggcaattgcataaataggccttctcagcagatgctatctcttgttaatctcgctcacctagacatctatttccagaggattaagcaggaagatctcagtgtccttggaagcatatctactctgctctacctccggttgaaactgcattttgtgcctgacgaaaggctctgtatcagcagccaacaattccagagcctgatggagttcagattcatatattatgaggggggtggcttgaggatgttatttcaacaggaagcaatggcaaagcttcgacggttacagattcggtttagagcagaggaaatggagtctaatgcaggtttcgagttcagttttcatcacctctcaagcctggaggaccttcatgccacgattagttgttatagagccactagaagtagcgtggaggctgcagaagctgccatcaggaatgcagctagtatccatcctggacatctaaaagtttcaatcataagagagtgggaaagccgcatggcggggctcagagagagatgaatcttgagtatagaaatgatgtaaggaggatgttcagaaagaggaccaaatggcagtttcttcagattttagaagtcctttcaggtccgtattatcccccagaaccgacaatacgttgttttagggcctatttcattttgattttgatccaccctacgatctttttgggagattagttccacaaatggtagatctgtactgacatttttttttctgtatggaattaacttccaataaactgcaggaccagcagattggccaaccacgtaatctgatatatagaggattagaatcagagatccatatcagtgtctgtcacaagaattaagaagctatgcaaggtattgttttccctctagagacaggaatggaattctttttaatgaatgagtagagtcaaggcgcgtgagttgctagttcgattgattgagcttgctacctggctatttgtatctccctaaatatttttcctcaaaattacttttggcaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0273300, RefSeq:Os12g0273300