Os12g0287300

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0287300| Description = Similar to SufS| Version = NM_001073122.1 GI:115488205 GeneID:4351999| Length = 8896 bp| Definition = Oryza sativa ...")
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Gene Name

Os12g0287300

Description

Similar to SufS

Version

NM_001073122.1 GI:115488205 GeneID:4351999

Length

8896 bp

Definition

Oryza sativa Japonica Group Os12g0287300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10962454..10971349

Sequence Coding Region

10962769..10962939,10967024..10967182,10967356..10967455,10968111..10968174,10968343..10968415
,10968509..10968654,10970748..10970934,10971267..10971347

Expression

GEO Profiles:Os12g0287300

Genome Context

<gbrowseImage1> name=NC_008405:10962454..10971349 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:10962454..10971349 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtttttacacgtaatgctactgaagctatcaatttagtagcatattcgtggggcatgtccaacttaaaacaaggagatgagattgttcttacgattgcagagcatcatagcgctattgttccttggcaatttgtttcccagaagactggtgctactttaaagtatgttgggctaaccaaagaaggggttccagacattgagcagttgaaaggtcttctgtcaaacaagacgaagattgttgttgttcatcatgtctcaaatgtactcggttcaatgcttcctattgaggatattgtaacatggtcaaacagaattggtgctaaagttcttgtcgatgcttgtcaaagtgttcctcatatgcctgtcgatgttcagaggcttggtgcagattttcttgttgcatcatcacacaagatgtgtggccctacaggcgttggattcttgcatggaaagtttgacctcttatcatccatggagcctttcttaggtggtggtgaaatgattgcagatgtgttccaagacaaatccacatatgctgagcctccttctagatttgaagctggaacacctgcgattggagaagctataggattgggaacagcaattgattatttgtcacaaattggcatgcagaagatccatgagtatgagaatgagttggcgacctatctctatgagagccttattgctgttccaaatgttcggatctacggtccagctccatgccaaactgttcaccgcgccccattatgttcttttaatgttgaaaatgttcatccaacagatattgccgaaattcttgacctccagcatggcgtggcaattcggtcaggccatcattgtgcacagatattgcatcgaactcttggtatcaatgcaagtgctcgtgctagtcttcacttctacaataccaaagaggaggtggatgtctttgtcgatgcgctgaaagatactattgatttccttacttctgaacactag</cdnaseq>

Protein Sequence

<aaseq>VFTRNATEAINLVAYSWGMSNLKQGDEIVLTIAEHHSAIVPWQF VSQKTGATLKYVGLTKEGVPDIEQLKGLLSNKTKIVVVHHVSNVLGSMLPIEDIVTWS NRIGAKVLVDACQSVPHMPVDVQRLGADFLVASSHKMCGPTGVGFLHGKFDLLSSMEP FLGGGEMIADVFQDKSTYAEPPSRFEAGTPAIGEAIGLGTAIDYLSQIGMQKIHEYEN ELATYLYESLIAVPNVRIYGPAPCQTVHRAPLCSFNVENVHPTDIAEILDLQHGVAIR SGHHCAQILHRTLGINASARASLHFYNTKEEVDVFVDALKDTIDFLTSEH</aaseq>

Gene Sequence

<dnaseqindica>8411..8581#4168..4326#3895..3994#3176..3239#2935..3007#2696..2841#416..602#3..83#ttgtttttacacgtaatgctactgaagctatcaatttagtagcatattcgtggggcatgtccaacttaaaacaaggagatgaggtgagtcctctatttttgaccagctgattaatatgtgttttaggctgactgtaccagttgttgtagttttatagtgcatgtaattgtacaaattgtgtttcttctaatattaagtacttaagtttttgcttcaagtgcttagtcaaaatcattttcctttttttagtctggactctggaattaccaaattcttcatctaatcaaatgcacctgaccattgtagttaactcatccgaatttcaccaagtgtcattatttggtatatatcatctgaagtttgtagtctttgttgtaccctcctgataagaactgtcttctattttgttggccagattgttcttacgattgcagagcatcatagcgctattgttccttggcaatttgtttcccagaagactggtgctactttaaagtatgttgggctaaccaaagaaggggttccagacattgagcagttgaaaggtcttctgtcaaacaagacgaagattgttgttgttcatcatgtctcaaatgtactcggtaagttgatgtttttttaaagaaaatattgttgaggttttgaaacatcatattgatccttaactgtaattgtgattccttttttaatgaaacgatcatagggttggctttgatactggcattgccaaatttttgtagggtggagatgtagttgacgtgtttggtttgatgccaacactgtatgggcaattgctgaaattttagtagggtaatgtttagatgaattgtttggtttgctaccttaccataattttggtattgtaccaaaccaaacaagccattagattttgtcttagagctaaaacatgattgtggaaaagacatgttttttatggctaacgaaataatgaaaatggataacaacagaagttagtgtttgtccaaagatattatagttaatgacagaatatttaaaacaaatgtttattataacacccctaggtattgacatacctagagagctatcatcatttgacggcactgcaggaaacaataggggttgaagctgaattgggaagaaccatctgcacaggaccccgcaaaagaagaattatacctctgccacttatagaatctgggttctgtttgcataccacaaccatgttgccaaccctgttgcacatgcaatctctcaaaaaagatacactatgcagaatggcagttcttcccacatttgaagctaatgaaaccttgctctattagtgctaagcgaagaaatgagattccgaaagcatggttctgaataagacttagctcctaactccttgggcctgaaagactgttgagtgtggttttgctcatagtctcaaagttcctggatcgatgcgatcgaggaacgtggtatgcttcttgtgagaggtttttacaaggtggggatgaaaatgtcccgtgttcctggaacatggaagatgttcctgggttgaggaatgcttccttcgaccctgttttctgtgactttggttttttgcttggacttgttgaatggggatcgctggtaattcttttctccctcctggtgaactctcttctgatcactagtcactactattgccactggcactcctagttctcttgtgcagcagtaagttggatatctccaactcctagtcctctaaagaaactcctgcccttaatgttccacacttcccacattaggcacagaggacaatgctgctaaagtttctgtcatgctcatccagtcttattttcttcccagatatgattcagttcatcattaatcctgttccctcaagaatccgggtgatacttccctgaagaactaaagaataacctttcaagtgatagcatcatgcgcaggggttcaggcttcacaaatcactcttatcatatgttagcccgaccagttagctggaaagacaaaaaataatcttctcctctagtgtcgtcctagatccttctcatcttgtgtagtgtagctaatctgcagcattgtttttgtggtatcctgagttcctgactccctgacctaaattgagtgaaaactccaccaaatgaaatatatagactagacctacagcttgactggaccatgtgacttgatttcatatggatttttaatcctagatttcaaaacagcgtttcatcctatggatcaggaaattaaattcaaattagcagcgagcaaacttgatttctacttgaaattgatccatctagggactaactagagattacccttgctgtgaggaaaatcaaatttaaattgccccaattatctcatcaagtggcacaggcctaattcttcagcaagatctcctgcatccagttttcctggagcttctggttcagccagtggtgccgttcagatgatggtagctctcttggtttgcagatacctagggcattacatttgcattagagcctgtatatgataaagagtagtttctttgtcacgtaacgagctgaaattaggttcatggtaacgttgaattagtctgtttcttactgtatcgtgaactatggtgtatggtattctgggaaattttccctgattgaatccatatccagttctcatttcatgtgatgtctgcctagacagcacatttggtaacacggatcttcatcttttccaggttcaatgcttcctattgaggatattgtaacatggtcaaacagaattggtgctaaagttcttgtcgatgcttgtcaaagtgttcctcatatgcctgtcgatgttcagaggcttggtgcagattttcttgttgcatcatcacacaaggttttattatcaattctttcttctaaataagtttgtaatcattgagagtagcgcaataattgactttgacaagttatgggctaaacttctcagatgtgtggccctacaggcgttggattcttgcatggaaagtttgacctcttatcatccatggagcctttcttaggtaagatactgtaggacactagaaatttgctcactctattatcagaagttaagttggatagttagcatccattggtgaagcatggccatgactaagaggaagtattgtttcctgttctcggggaagtattgttctataactaccctcgaaattctgatttcctttcaggtggtggtgaaatgattgcagatgtgttccaagacaaatccacatatgctgagcctccttctaggtgaatcatattgtgacttcttactttgatcgttctagatttcatcatctatgtcatatcgtcttaggaaagttggtgcacaatgtatatcagtctagatctttcatgaactatatcataatcttctggaggaaagtcagtgcagaacaataaaatatctaaagtgattaatagtacaatgtaatacagcagaatcatttggtcattttgaataatggttatcactaatatttctcggatctcccaagctgttgtgtggaaacaactgccacactcttcttactttcctaacaaagatatgtctttctttcctcttcattttctgatataaaattgatttgtcccataagaccaagaatatgaagataacatgttgcagattcctagacatgtgaaccataatcatttcaccaaaaacttgattgtgttagaaagttgatatgttatagattttattactaattcactatgttagaaaagtatctcccttgtccacatttcttccaagattgcctctgctttatattatctgtcagtaaaattgaaatgaatcccttttggaatttcatgggacttcaaaataattgctaatggtggctgtaccttttttcttcatttcatatctggggattctaattgtagttgttctgaaaagatttgaagctggaacacctgcgattggagaagctataggattgggaacagcaattgattatttgtcacaaattggcatgcagaagatccatgagtatgaggtcagaataaactgtttatgttttacctccttgcattgttctcaaatgtactttattatcgtttcagaaaaacaaaaatattgctctatgtcatcatactgtgcttattccggtctttagaaaggtttcagctatttataacattctcacaagtgttatgttttgccatccagaatgagttggcgacctatctctatgagagccttattgctgttccaaatgttcggatctacggtccagctccatgccaaactgttcaccgcgccccattatgttcttttaatgttgaaaatgttcatccaacagatattgccgaaattcttgacctccaggtatgcattctgtcaaccactaacctcagatgcaaatgctagttttgagttttatgagtactagatgaataagtgcggcgtgacgccgcgcccgttaatgtgtacataatgttagttgaaagtaactaaacaagctttgccaaatcataagacttgaaatctcttacaaaacataagtttatatccaaggcagtccttccatcctgtaatcaaatctgagtttagaaaacagtattggtctatatactatgctacaaagcatcggtccacggaaagacacgcattagacacgcatttgagatgacaaagccatagaagtcaataaaatccgcatgaataattgccgatgagtcaatgacttacaacagcctctcaaggccacatcatcacaattacagtcttccatttgacataaagaaatctgaataatgcatcccatatttttacaattctgcggacaaagactgaggtattgaggtaggcatctattaccttatattcttctagtctcaaattccttcgtatgtttatacaaaatgcattaatttgcaagttaatttcttcaaaaagagaaatatttagggcaacaagagaactcaagtcacttcatcagcttgagaggatggttatttgcacaaacaacttgagctagccatcgaccttaacatccagtttaatggtttataaccaattatttactttttttaagggaggtttcaacccagtcagaaatacatattaaaaaaatgaaaagacatcagctagtgatcaacctagaaaattatatcaaacagcacaggaagtcaaacaaaaggaataagcctaatttcttatattgcaatgctctgctttctgaaatttctcctatgaaccaaaaaaaaaagaagcatgctctaaacagcgatgctatgatgggaaaatagatcatgctcagtattttctgctgcttcctgctagcctcctttttgctggttgtttcttccagagggaactgggacatcaaatggcagccaaaacagctgaccatggagctgtcatctcaaagtggccattttcagctccatgtacttacctttgttcttccaagcttgactgaagtaatagtggatgtcaccatctgattatatcacaaatactgaaaagtaacttatgcagagatttagaagtaggtgcttaacagcatagtcaatccatggaccttgtattaaacctctgtaattcatgtaaaagataattgaaccaagaaacataaacacaaaattcataaacctaatccttatgtctcaacactcaaaagcccaaagcagccactttgcattgtacatctggaaattattttataatcagaataagaacacaaagaagcatacttcgatgccaacatactgaacactggaaatacatcctaaggagcacaacctgagtatgtgtattgatcaaaagacattgataatgctcagcagctaagtagtgtagcaaagaagaacatcccaaataactgcagagtagaactctgtaagaggtgaacaacagaacaaagtaatcggtggtgataccttttcaatggaccgttgctttgaaatacagatctgatagcatcataagagcaaccgagcaagccaggaataaaaatctaaataagtgttttcacagagttgtgcattattttaaaattaaagtaaaaattgaatacaatcactcactaaaaaaaagaacatgctgtgatttgagtaagtaatagcaagggtgcacaaccaaaatgcccccagtggaatccgcaacctcctggtgcaagcgccgggagtagcggctggttggctgcacgagaccaaccaagcacacagccttgctgtcagctaaaagaggaggcagagaaagagatgagaagtgattgaagacctcaactcaccggagataagaaggattggctgagcccaaatccttgcagatctagccccgacggtgggcaaatcaattgtttaccaatgtggacagccaggcaccgtgtccttcaccttcccctccaaagaaccaaatcacaatacaaagatgaccgtagcaggactcttctcggtggagtcgaggtttgtgtcgaggcataaacgctggtggcgccatcggtggaggcggccgctgagatgtcggggttgaaggaggccactggtcgttttcatcacagtcgccgtcatcgtcatcgtcgcagccaccgtcgccgctgtcgtcatcgtcgttgcagccaccgtcgccgtcgtcgccgcagccaccgccaccgtggcgactcgctcccgcccgcctaaacccaccgccgccagtcccgagggcggaggcgggcggatcggcgtgctgccggcgttcccgctcccgccaggccactcccaaggatggaggctggtggattcgtgcgccgtcatctcgcaggtgggggaggatacttttggggggcagcggagtggtcgaggcaagtgaagtcgtcgccgacggccggcccggtgtcggcgttggaggaggccactcccgttttcgtcgtagccgccgtcagcatcgttgtcgtcgtcgcagccaccatcgccattgtcgttgtcacagctgccgccgccgtggccgctcgaacctgcccgcctaagcccgccgccgtagctcccgagggcggaagcgggcagatccgcgcgctgccgtcgctcccgagcacgggaggcgatggatccgcacgccgccgtccttcccagtcgcgcctggccgctccagaggacataggccaccggatccgcgcgccgccgtctcttccgagaacggggggcggcggatctgtacgccgccttccttgcccctacactcccccctttccgacgacgcggcgtacacaaggacggacgacgtcggcagcggcgggtggagggcggacgacgacggaggcgactggggagggtggacggcagcggggggagttcctgtttttatatgtcagttttctcctcccctccgcctgaagcctccgccgcgaccactgccgacgccgcgccagatccggaggggagggccgccgccgccagcgccaccccccttatggcggagccaccgccgcatccaccctccgcgtcgcctccaccggatctaggaggagggaggggagccgctgctggctccaccctctgcgccgccgccgccacagccctccggcgggaatctacgcgcgagaccgctgggaagggaggggaggggaggagagggagagaatgggggagggtttccggattgggggtttagcgtaggactttttgccgaaaagcccctatgttttttatgtttacagcgctacccctggaagcggaattttctcttcttcgcattgtatttttctgaaagacaaggggttatacgtaagaaacaaaacgggatgtcagtcggcgcgaggacgtatgcgatattccgtgcaaatacgaggagttttttacaaaaagcccagccctctcaccgggagcagcccctccaccttaaccggcacgcatgcacaccaccacagcgcccaaaatttgattaaccggcgcaccgcttatgggcggttgcccccgctggcgcgaggaggaggaggggttagcagcgacgtgtaaaacaacgagatagcccaaaaaaaattcaaaaaaatgagaaaaacggtggggttaggggagttattgattgatgatacggttactgctcgcatgctagctctgtaaatttttttggattaataaagaaacacttttctgataactttctaattcacaccatattccttttaagtatttatgttctgtctcatagctgtttgtattcagctgtactttacctagtttcgactgcaaacacaaaagggtttaaaaattttacatcatgtattattaagaaattatgacttccagcatccaaagcgtaaatattttcttgtgaaaaattcttaaatgtttccatctgcttcaagaagggttatcttctcaatagccttccctgaacagcatgttgtttagtaaagttatttgttattgtgccttcttcaatttatttttctagcccttgcaatgtaatattgatgaactatttgtttcagcatggcgtggcaattcggtcaggccatcattgtgcacagatattgcatcgaactcttggtatcaatgcaagtgctcgtgctagtcttcacttctacaataccaaagaggaggtggatgtctttgtcgatgcgctgaaagatactattgatttccttacttctgaacactagtaccacggttcgattagtatacggcattctccctttttacaagtttcaggttgactttatctagccaaggggtcatacaattacaaaatgaaacaaccaaccaaaacatgtgtattagattgcctactttggcctttcttgtaaatcaagtccctttttctcccatccctgaaattttgcagaagctgaatttgtacaacagaataatttaagtgttgcagcaagctgtgagaaagctcatgaccttgaaggtttatttgtaaattatgctgacctgtatgttctcttcgttgaaaatcataaacaaggttacac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0287300, RefSeq:Os12g0287300