Os12g0288400
| Gene Name |
Os12g0288400 |
|---|---|
| Description |
Similar to Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb protein) |
| Version |
NM_001073125.1 GI:115488211 GeneID:4352002 |
| Length |
11219 bp |
| Definition |
Oryza sativa Japonica Group Os12g0288400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:11044959..11056177 |
| Sequence Coding Region |
11045235..11045315,11045397..11045453,11045864..11046068,11046172..11046299,11046388..11046493 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:11044959..11056177 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:11044959..11056177 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcgggttcttggcggtggtggggaaggtcgggaccttcctgctgtggctgctcttcctcgtgctgcagacggccaccaagatcgtcggcagcctcctcgccgcggggccaccaccggctgacgcccaggaagccgcggcggcggcggctgcgcggcgcaggtcgccgccggcgtcgccgcacagcggtggcggtgccacggacccgtaccagcctccgcagctgtgggacccgccgccgccgtcgtctccgtactcggctggccacgcggcggacgaatactcctcgtcctccagctaccggcggcgcggggcgagcgcgccgccggccgaggacgtggtggtttcctccagctactcgcgccccgccgcggcggtggcgtcggctccccaggcttgtaccgtgtcgtcggcgcctccgctgagggcggtcgagacccggtcgccggcaccgtccagggcggcggcggcggttgggggtaagcggccgaagctggagaggaagtattccaagattgtggatcagtaccgctcattggatgaggttattgaagcactagcgcaagctggtcttgagtcttctaatttaataattggaattgatttcacaaagagtaatgaatggacagggaagcgttccttcaatggtatgagcctacatcatattggtgattccccaaatccttatgagcaggcaatcacaattattgggcaaaccttgtcagcttttgatgaggataatttaattccttgctatggttttggagatgcatctacgcacgatcaagatgtgttcgctttctatcctgacgaaagaccatgcaacggttttcaggaggctttggcccgatatagagaaattgttcctcatcttcgtctttccggtcctacatcattctctccaataattgaaatggccacaaccattgttgaacaaagtggtggccagtaccatgtattagtaataatcgctgatggacaggttacacgaagtgtagatactgaatttggccagttaagtactcaggagcagatgactgttgatgctattgtacaagcgagtgaatttcccttgtctataattttggttggagttggagatggtccatgggatatgatgaaggaatttgacgacaacatacctgctaggtcttttgacaatttccagtttgtcaacttcacttcaataatgtcaaagaaaatcagtcagagcaagaaggaaacagaatttgccctttcggcactcatggaaattcctttgcagtacaaggcaacattagagcttggaattttagggcgtcggttcgcgaagtcacctgagcgagttccactgccccctccctttgcaagctataatacaatctcgagagcagcaccatctcgagcaaatagcttccgcagtatgccttctcatcctagggatgaggcacctgtagattcagcaatcacagcatcagttacatccccaccaagcgtggatgctagagcagcagaacctcaactctgcccagtttgcctctccaaaccccgggacatggcttttggttgcggacaccagacatgtgctgaatgtggaccgcaagtcgaacattgccctatctgtcgaaggccaattgatacaagagtaaaactgtactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSGFLAVVGKVGTFLLWLLFLVLQTATKIVGSLLAAGPPPADAQ EAAAAAAARRRSPPASPHSGGGATDPYQPPQLWDPPPPSSPYSAGHAADEYSSSSSYR RRGASAPPAEDVVVSSSYSRPAAAVASAPQACTVSSAPPLRAVETRSPAPSRAAAAVG GKRPKLERKYSKIVDQYRSLDEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGM SLHHIGDSPNPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCN GFQEALARYREIVPHLRLSGPTSFSPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVD TEFGQLSTQEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFDDNIPARSFDNFQFV NFTSIMSKKISQSKKETEFALSALMEIPLQYKATLELGILGRRFAKSPERVPLPPPFA SYNTISRAAPSRANSFRSMPSHPRDEAPVDSAITASVTSPPSVDARAAEPQLCPVCLS KPRDMAFGCGHQTCAECGPQVEHCPICRRPIDTRVKLY</aaseq> |
| Gene Sequence |
<dnaseqindica>10863..10943#10725..10781#10110..10314#9879..10006#9685..9790#2954..3033#2735..2832#2536..2649#2295..2435#2119..2203#310..840#196..210#agccaacccaagcgtcagctctggaaagcaacccaccctactcaccctcctcctctccctcactcactccgtggtcgtcgtcctcctcggtctcctcgccccggtccacccccactgacaagtgggcccaccccaccatcccccccggctgcgtccgcggcgagcagcggaggcctccacctcgccggcggcggcatgagcgggttcttggtaagcgctagaggcctagagctgagcaaggcaagcaagcgtgcaagctgcgcgcgcgagatgattcgtttagcttatgagctctcttgatttgggtaggcggtggtggggaaggtcgggaccttcctgctgtggctgctcttcctcgtgctgcagacggccaccaagatcgtcggcagcctcctcgccgcggggccaccaccggctgacgcccaggaagccgcggcggcggcggctgcgcggcgcaggtcgccgccggcgtcgccgcacagcggtggcggtgccacggacccgtaccagcctccgcagctgtgggacccgccgccgccgtcgtctccgtactcggctggccacgcggcggacgaatactcctcgtcctccagctaccggcggcgcggggcgagcgcgccgccggccgaggacgtggtggtttcctccagctactcgcgccccgccgcggcggtggcgtcggctccccaggcttgtaccgtgtcgtcggcgcctccgctgagggcggtcgagacccggtcgccggcaccgtccagggcggcggcggcggttgggggtaagcggccgaagctggagaggaagtattccaagattgtggatcagtaccgctcattggatgaggtatttatgcaactatgcaggtgtatataccagtataagaactcattgtaatgcccaaatctacaacaattacgcggctagcattcaaaaatcgcgtcgcggaatatattgcgcacgacatgagctgcattgtctgggaaacagtgacaatcttggttagtttagagctttggagcatgccctgttgatgcggatcacatacataggtgttttggttggtagcgaaatcatgtgttcattatgcaattttagttgatgataacttgataagaaccttttaatggaggcggtttttatggcagtattgagctgaccttgtaagtacagttgacacaagccaccaatttaagtaatttgacttatgtagtaatttaactagtattaatcagataggttgattcatggtggtataaacaaatgtgtcggagaaagatctccataagtactaccagccatttttatgaacccaccctctgtcagcctggtcagggtgttaggtcactggttggaccatggatcatagtctagcccaacagtcgcagaaggcctaacaacttttcatgccaagcatgtgtttcaaggaaaaaaaggggcacatttcgattttttttcttaactctgcccaagtaccctgtgaaaatttttaaaaacccacatagtttagctggttttgctgataatgcaagatagaagtaagatccatttacttagccttgcaatttgcatgcaccatttctatgcaactaatgcttaattttttagctggttaagcataccctttgtgtggtgaaatagagtataaaaagtattcctctatctgatagtatgttcatctgtagcaaatgaataagaaaggcatgatgttactttgtcttaggatccactatttgactagtcccaggcacttccattgacataacttccccacccaagtacaggtgttaccaaagaaaaggtttcgcacaatactgcacacaacagtcgtgcaaactgacatctgtagttgttgtgtgcgtatttgttttctcttattgaaagtctgacctagtccatgaactattgcaaaaacaacttaattacaacaattcgctattagcggaatcatgcatacagattaacgcgcatacaaaatcatctactacaaaaagaacatactcttgcatctgcacatgcctttcttttcatgaagatgtattggacttcaagatcagtgccatcaaatacaattagtctttatctcctattgacaccaaactgaaaacaatattggatgtgcaggttattgaagcactagcgcaagctggtcttgagtcttctaatttaataattggaattgatttcacaaagagtaatgaatggacaggtaattttatatggaagatgagtagtttatcgcggacatatttttgatgaaagaaagcatttgtccaatgcttaactatgtgtacattcagggaagcgttccttcaatggtatgagcctacatcatattggtgattccccaaatccttatgagcaggcaatcacaattattgggcaaaccttgtcagcttttgatgaggataatttaattccttgctatggttttggagatggtaatgccatgcagtttttttatttaatacattaatatatcataaaattttgaaaaaaaactaaatattacagttctgtttccactttccaaccgtgcagcatctacgcacgatcaagatgtgttcgctttctatcctgacgaaagaccatgcaacggttttcaggaggctttggcccgatatagagaaattgttcctcatcttcgtctttccggtaagaacattcacttgctttgttatcttttggaatgtacaaacaccatcaatgtataaatgtgtaatttattgtgtttctttaggtcctacatcattctctccaataattgaaatggccacaaccattgttgaacaaagtggtggccagtaccatgtattagtaataatcgctgatggacaggtatattgtacattcttgtgtatacttttgcttcaagttattattattttccttattttgagtgaggaaaattatttttattagattctttggccttttttctgatgctatcataaactaggttacacgaagtgtagatactgaatttggccagttaagtactcaggagcagatgactgttgatgctattgtacaagcgaggtaagatttatgttatgtgacattaaatatatggagtgaaaatttggctattttctacaaatatttgcttaaatgggaataaatgcctgaataaagatagatatgtgttttatgttaatttctgcataactctttgaaacatatgatttggacatacaggggactgtttcaatcatctagagaagcaagggactggtttattatttctttttttttaacaattgaagcaggagatctaccaataactagtaggacacaactaagactgtgtcatgtttgcttagaaacattcgacagggacattgtttcaagaatattatcaacatctgaataatttgaggccaacaaaacatatgcagccatcttaaagaaacaaaatctatgcagtgtgcactacttgaaacagaagcctgttatcttaagctcatgttttccttaatgaatttgaatacctcctgcaatataagttatgttgattaaaagatgcaactattcctctccttgaaatgtttcaaaatatgtggatgattgctctatcaaaaatcttcccgagttcttttgtcaccctcttccttcattttttttcaatgattttaagggaatattcactaaaacattgaggcttgcctgcatttaagttaatatagttgctgctttttactgatatctatggtcaataactggttgtttcatgagttttgtgagttttaagtaacatcggagaatttatacatgaaggaggatttggagctacaagctcacaccttggttttgcatgattcatgtgaaaaatgtaactatacgagatcagttcatcatataggatttttttgatactacaaaaaacacagaataaattgcagtttgcagcaacaggtcattgttcatgccctagtcagaaaaacggtcatgacgatgttagaatttcaatggttactctcattgagaagaggatggcactcgagatggggcaattttctggttttcttcattcacaaaacacaaaaagccataccttcccgagggaggttggatacatatatatagccatagctggctggatggctgctagctaattgctgcccacattagtctaaaatttgaacgcaatgctgtcctagagagcatccaaactgaataaagcataaaggaaatgctagatgctgtcctagggatgctaaaagcaaaaccgaaagatgctaaaagcaaaactgaaaggatgctgccctaaaaggggaaaaacaacctaaaagcaagagaaggaccacaaggaccaaagaccacaaggcttattccatcattctccccctaagtcttgtgtgtcgtcttgtgggaaagttgggccatcccgatcctggagcagagctcgaggaacttgatcctcccaagaggcttggtgagcaagtccgcaagctggtccttggtgttgatgtagctcgccttgatgctcccttcctccaagtagtttcggataaagtggtacctcacccggatgtgcttgctccgttcgtggaaaacggggttctttgccagggccagagcggacttgctgtccaccctgagctctactgctccagtgtctctgccgaggagatcaccaagcagtcgagcaagccagagcgcctgggtcgaagcggcggatgccgccatgtactcggcctcgcagctggacagggccaccacctgttgtttgaccgactgccagctaacgaggcactcgccgaggaagaagagaatcccgctcgtgctcttgctggtgtcgatgtcgccggcgtggtcgctgtcgctgtacccgacgaagtgtgccttgccaggacacctcgggtagtagagaccgtggtcgagagtccccgcaacgtagcggatgatcctcttcacagcctgctggtgctccgtcgtcggttgctgcatgaatcgactgacgtagccgacggagaaggccaagtccgatcgtgtgtgggtgaggtagcgaaggctccccacaagacgccggtactgtgtagcatccacctcctccgccgtgctgtcacggctcagcttcagtctctcctccatcggagtgagagctgggttgcaatcggtgagcccagccagctcaacgacgcgcttagcgtaggcggtctgtcgaagcgtgattccggagtcgtcctggtgcacttcgatccccaggtagaaggagagaggccccagatcactcatctggaaggtggccttcatctccttcttgaacgtcgccacctccgcatctttggtgccagtgatcaccaagtcgtcgacgtagacacccaccagcaaggcattttcctccattgccccgccggtagatggccgcctcgtgcgggctttgctcgaagcccatccccttgagcgtggaatccaacttggcattccacgccctcggtgcctgccgcaagccgtagagggccttgtgcaggcgtagcaccttgccctccttgccggggagcacgaatcccggcggctggtgcacgtagacctcctccttcaagtcgccgttcagaaacgccgacttgacgtccatgtgatggacaccccagccttcctgagcagccagcgcaaggagtcgcacggactccatccgtgccacgggagcgaaggcatcgtcgtagtcgatcccctcttgctgcacgaagtcgcgtgctaccaagcgagccttgtgcttgacgatggctccggcttcatccctcttcagcttgaacacccacttaagggtgattgcgcggtgaccacgagggaggtcagcaagctcccaggtgcggttctcctgaaccgcgtccatctccaactgcatcgcggcacgccatgccgcgtgtttctcggcctctgcaaaagaccgaggctcaccgtcgtcgcacgcaaggtgcaactgcgcctccaggttgcgaggcaccagtcccggcaccggctggtcgccgagaagatcatccatcgtacggtaccgtagctgctcgccgtcgtggtacgcgtcgatgcgctccccgtcgtgggagagcggagtaacgaactccaccgggctgcgctcaacacgagctggcgtcggagtagacgtgcccggaggagtggctgttggtgctggagcgcgtggggacaccggctggggtggtgtcgacgaagagctcgtcgtagtcgaagtcgtggcccgagggtgtgttggtgttggagtcggtggaggctcggggactggggtagacacactcggtgaagaagagctgcctactcccccagctccctcgaagtggacgtactcgatggtgaagtcgtcgtacgtcggagtcgaaccatcatccaccgccttgtcccatacccaccctcgcccttcgtcgaacactacgtcgcgcactgtgcgcacacgctgtgtctccgggtcgaggatgcggtaggcctttgagccctccgcgtagccgatgaacacccctggggtgctcctgtcgtcgagcttaccgatgtggccaagctccttggcaaacgcgaggcagccgaagacccgtaggtgggagaccgccggcttgtgcccatgccaagcctcgtacggtgtcctgccatcgagggccttggtaggcgagcgattgaggatgtagacggctgtcaccaccgcctccccctagaagatggccggcatccccctctgcttgagaagagcccgagccatccccacaaccgtctggttgcgccgctcgacgacgccgttctgctgtgggctgtacgacgcggtgtagtggcgctggatgccctcatcgccgccgttgtcggtgcgcagcacgcgcagcttgcggccgcactccgcctctgcagcggcctgcgcgcgcctgatggcatccgcagcctctcccttgctgccgaggaccatcacccacatgtagcgggagaggtcgtcgacgagcagcaggaagtaacgtcgtcctcctggtgtggccggtgtcactgggccacacaagtccccgtgcatgagctcgagccgctccttggctcggaagctcatctgcggaggaaaggggagccgccgctgcttcgttaccacgcagacgtcgcaaagctgctccatgtggtcaaggcacggcatgcctcgcaccatctccttggcactgaggcgcttcagggcctcgaagtggaggtgcccgaagcgctcgtgccactgccatgcctcgtcgtcccgacgagcggcgaggcaaactggttgtgcgacctgcgcgctgaggatgtagagtcgattagtgcctctggttaccttggcaagaaggcgacgacggcgatcccaaatcctcatgagtccgtcctcgaccaacacgcgtgagccattctcatccagctgtctcacgctgatgatagaattcctcaacgcggggatgtagtagactccggtgagcagcctgtgctcaccggacttggcggtgaaggtgacggagccaacacccttgatctccacgccggaggcgtccccgaacttgacggagcctcggacgctggagtcgaactcggtgaagaactcccgtcggccggtcatgtgatgggtggcgccggtgtcgaggtaccacccatcagccttgtcgttgctggagccgttgcagagggagacgagtaccttcggctcatcaaggtggaggaaagccgctgcggccggtgccgctggaggtagctcgatgcttgcgtgagctaggagcagagccggctcttcctcctccacccgtgcgacgtgggcctggccgcgtcgtggctgtcgacagtctttggcccaatggccaagcttgccacagttgcggcaggcatcgtctcgtgccggcttgtggttgccggtggcaacgccctgggcgcctctgcgggcgccacccttggcacgtcttcgcgcccaccgtagctggacacctccccgcgccttgcgcggcttacggccgcctgtcggggaagatgactcccccttcctcccgtcaccctgagaggcctcccactgctcccgagtgagatggagcttcccgccgatggtgatgggccccgagagaggctgtggctcatcaccatcgacgaccttgaggcgacctaacgcctcctcgatcgacatcgtggagaggtccagcagagattcgatcgagcgagcgatctgtctgtacttctcagggacgcagcggaagagcttctcgacagctctctcctcgtcgtaggtgtcgttgccgtactgcaccattttctgcaagagagtgttgagacggagagcaaagtcatcaacatcctcacctggcttgaaggccaggttctcccactccttgcggagtgcctgcagtgtggacttgcgggcgcggtcgctgccgatgcgtgccgcagcgatggcgtcccaggcctccttggcagtccgcttctgggaaagcgagaactgcatctcgggcgggactgcagcgatgagggcatccagtgcccgccgatcctcgtcgtagtcgacgtcgccgtaccggactgcctcccacatgtgccgcacctggagcctcaccctcatcactgcggcccactcgatgtagttggttttggtgagggtaggccacccaccgccgggaccaaagtccctgaccaccgtctggacgccgtggtgaccatggcgccggtcaggggagagagagccgcgctgcctgcaagggccgcgtgcgggctccgggctgccgccggcacgcccgcgcccatctgggttcccgttggcgggcgcgcggtcccttgggccgccgccgccgccgtggaggtgggctgctgcccaccgctctgcccgctcccgtgcccttcctcttgccagctcctcaagctccctgtcggcggtgatgtcgccggcgatggagccgttgatgctgctgcgcaaggtctcaacctctacctccgccgcatgtgccgcatcttccgccgcctctgcctccgcctcctccctggctgctgccaactccgctgccgccagtctggccgccctcgctgctgctgcagcggtctgagctgttgctcgcttgcgctcttctgctgcagcgagctcggcgtcctgctgacgccgagtgctcgaggcgaccgaacgccgagaccgagcgtcggacatggcgcacctgcggggggctgctgcgtggagagggggaagggaaaggggaaggaggagcaaccggtgctgctgctgctgctggctgagagctcaaccgagcttgggaaggggtggaacaagagatgtttagcctacaggaaagtgttgctctaataccagatgttagaatttcaatggttactctcattgagaagaggatggcactcgagatggggcaattttctggttttcttcattcacaaaacacaaaaagccataccttcccgagggaggttggatacatatatatatatagccatagctggctggatggctgctagctaattgctgcccacactagtctaaaatttgaacgcaatgctgtcctagagagcatccaaactgaataaaacataaaggagatgctagatgctgtcctagggatgctaaaagcaaaaccgaaagatgctaaaagcaaaactgaaaggatgctgtcctaaaaggggaaaaacaacctaaaagcaagagaaggaccacaaggaccaaagaccacaaggcttattccatcagactaacctgtaccttcactgttgcagtgaatttcccttgtctataattttggttggagttggagatggtccatgggatatgatgaaggaatttgacgacaacatacctgctaggtcttttgacaatttccaggtatgcttgaaatgaaaactataggagttatttttatagtttgatcgaatttctaaacaaaataatgtggacatgtttgccatcctagtttgtcaacttcacttcaataatgtcaaagaaaatcagtcagagcaagaaggaaacagaatttgccctttcggcactcatggaaattcctttgcagtacaaggcaacattagagcttggaattttagggtatggaaatgctgaaggccagttacacatatacacttttaatttattaattttaaattgatgtaatcccctctattttgttattcttgtttgtactgactaggcgtcggttcgcgaagtcacctgagcgagttccactgccccctccctttgcaagctataatacaatctcgagagcagcaccatctcgagcaaatagcttccgcagtatgccttctcatcctagggatgaggcacctgtagattcagcaatcacagcatcagttacatccccaccaagcgtggatgctagagcagcagaacctcaagtatgaaaatttctatcttgctaccttcgtgcagattaaaaaattattgtgcattagtatatatgagcaggatatgtttttgattactcataaaggtaagtagatacctggaactattctttgttcagaaataatagcaacaaaggatcgctctattgtagtacatatgtagcaacagaaaacaattttgaataaatcttgcaaagataaatcacctcttcgcttgcaacaaacatgattaatattggatgaaattccctagtcaaaacactgatagtatgtttctaatttcttgaactttcattatttaaaaagaataccatatgaatcggctgaaatttacctgtcacgtgcttgtatttaaactgaagagtcacatgtacttgggcaatcttttttcaaatgtccagctctgcccagtttgcctctccaaaccccgggacatggcttttggttgcggacaccaggttaggaatactgctttcaggtttatcctgcattttcccaattgatcgttcaacaaatattttgttttcctttacttgcagacatgtgctgaatgtggaccgcaagtcgaacattgccctatctgtcgaaggccaattgatacaagagtaaaactgtactaatttcaccatctgtgatgcataaaaggttttcgtcgaaggccgcatccatggaggactctaataggctgttataggagtgcagtatgtactaatgttgataaaagatagcggtcaaataatcacaataaaacttgtatcctcttctgatgtaggtgtggtgagttaattgttatatttgtcattacaaggagtaacggaataatgtgggacagggagaagtcactttgactccttccagctcttccaaatggtttacccaggaggtattcgaacgct</dnaseqindica> 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