Os12g0299700

From RiceWiki
Revision as of 10:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0299700| Description = Conserved hypothetical protein| Version = NM_001073153.1 GI:115488267 GeneID:4352036| Length = 3127 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0299700

Description

Conserved hypothetical protein

Version

NM_001073153.1 GI:115488267 GeneID:4352036

Length

3127 bp

Definition

Oryza sativa Japonica Group Os12g0299700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:11914530..11917656

Sequence Coding Region

11914602..11914707,11915093..11915202,11915298..11915339,11916307..11916474,11916550..11916726
,11916892..11917095,11917169..11917363

Expression

GEO Profiles:Os12g0299700

Genome Context

<gbrowseImage1> name=NC_008405:11914530..11917656 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:11914530..11917656 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaggaaagagatcgacctcgacctcgacctcgacctcgacctcgagtaagcgaggatgcagtgctactcgtacggcgacggcggggtcaatcgccggtgtagatcacaatacgtaccattgtctaatagtcttagttctgtttgagacgccctctggcttcgcaatgttcggtatgagtggggacagactcattcaaccaaatgccctgcaggaaatctgggcaaactttggcgtggactatagggtatccaaattcatttggctgaaggaatttcgagaaatcaaggacaagtccagtgccattaatcatgatactggtgtcagttgcgaccttgctgagatgatcatgaagtggcatcaccctgggcagaaaatggccgttggaaaacccgaatataaagaaatcattgaaagaagcttgagtgtgccctgcatgtttgatgaaattgtgatggaagtgatgtggggcctgaagaatctgatgcatgttttagtaccccaagaaaaaatgaagttgagcaaggacgactacctcccaatgagccaaggattgtacatgctccttaaccgctatggtttggatgtcaaaccagagatggttactgactctattattaagctggcatgcttcttgcttgattgcgaatactgtgatgtgaaaaactccaagcacttgcgctggactggtgaatacattgagaaacggtctggcattaaatgtttagactgggatttgatgaaacttgctacgggtattaagatcatatgttaccccacagaaagatctacagctgaggaagcgatgtttacacaagatgagctgtcgaagttagtgaaggatgcacataagtatgaagggaagatccgtaagagatctttcatgaatgcctacagcgagatggttgaagcccgtcaacttattcctatggcacaaaaacaactggaggacttggtaaaggaggccaaagatgcatgtgaagctgaacaaagcacatga</cdnaseq>

Protein Sequence

<aaseq>MTGKRSTSTSTSTSTSSKRGCSATRTATAGSIAGVDHNTYHCLI VLVLFETPSGFAMFGMSGDRLIQPNALQEIWANFGVDYRVSKFIWLKEFREIKDKSSA INHDTGVSCDLAEMIMKWHHPGQKMAVGKPEYKEIIERSLSVPCMFDEIVMEVMWGLK NLMHVLVPQEKMKLSKDDYLPMSQGLYMLLNRYGLDVKPEMVTDSIIKLACFLLDCEY CDVKNSKHLRWTGEYIEKRSGIKCLDWDLMKLATGIKIICYPTERSTAEEAMFTQDEL SKLVKDAHKYEGKIRKRSFMNAYSEMVEARQLIPMAQKQLEDLVKEAKDACEAEQST</aaseq>

Gene Sequence

<dnaseqindica>73..178#564..673#769..810#1778..1945#2021..2197#2363..2566#2640..2834#gcagcggcgtctgttgccggtattaggaagccaacgttgagacgtcttccttcggtcccaatctcacacaccatgacaggaaagagatcgacctcgacctcgacctcgacctcgacctcgagtaagcgaggatgcagtgctactcgtacggcgacggcggggtcaatcgccggtgtaggtgagccaccaaccctctcttgatccctcccacgtcggaaggaaaactggcgtgtgaggatgagaaagcaaacccctagcggatccttaacttatggtagcacatgcatcgcatgggaagagcagatagatctggggaggcgattcctgtatgcacggaacccgtttgttgtcgatctcgcatactgtgaacaccctgttcatggcagtttgactccgcgtggcagatgtagcggttatttcgcagagatgagggcttttcagcctaagatccacatctttgcttcacgcgtgctgactgaatgggcgattgatctcctctcgttgcctcttgcagtccttcgtgcttgctgttgcttaagtttgcttggcttgtgtgttcgcagatcacaatacgtaccattgtctaatagtcttagttctgtttgagacgccctctggcttcgcaatgttcggtatgagtggggacagactcattcaaccaaatgccctgcaggtgcatgcttttattccttccctgtttacttatgtgcttgattgcctctctctttgtcatcgacctaacttttctgttttctctaccaactacaggaaatctgggcaaactttggcgtggactatagggtatccaaagttagtcatttcttcttattgttattccttttttttttgcgttgttggttgccagtttgaattgggtattgaccaccacatttactttacattttcctttttatttgcattgagagaagaaatgcaagcacaagctcagtattcatttttttgtttgctgatcaactgattgaaaatgcattttttccataatgctctgttgaaagttgttcgttatagtttaaagaatggattgttgcaggctaaaacctttgctatacaaccaattttattttctaactgtgggatagggatgattgagctctaacatgctccgaaagccagggttaccgggataatgaacaccacagcctaaccgaaagaacatcactttgtttgtttttaaaatgcgttgtatattaccttagcacaacaacttattctcaatcacattgcaagaacttaaggaattgaaaaaggctagatctttcgattgtgattaaatattccagctgttcttggcagcacatcttgagaagtaccgcttttcaaaattcaaaattagtaactgggctaactagtaactgggcccagctgcccctctttcatagcacctaggattgcatctagttgttttcctgcctagtgttgtttcgggtctgcacagagaagtggggcaaattagagatgaagattttacatcattgatgtcatggatgtatgatatgccagtttctatgatttaatatgccaggtttgctctatgtaatatgatagtacatactctatgtagtaaaatttacatgtgcctaatcatgcctaggtttgcttggtggaactagctgcttagcgtccactgtttttgaaccactgattgcggtgtacctactgaattgcatgcgtcatgattgggagacattgcatgattatttactggatttatttattttttgccccttaacattcttctctttcgtttatctatcagttcatttggctgaaggaatttcgagaaatcaaggacaagtccagtgccattaatcatgatactggtgtcagttgcgaccttgctgagatgatcatgaagtggcatcaccctgggcagaaaatggccgttggaaaacccgaatataaagaaatcattgaaagaagcttggttagtgttcagctcccttgtttgcttttcttagtggacaaccttgagcaccaattttgctgtcatttctttcagagtgtgccctgcatgtttgatgaaattgtgatggaagtgatgtggggcctgaagaatctgatgcatgttttagtaccccaagaaaaaatgaagttgagcaaggacgactacctcccaatgagccaaggattgtacatgctccttaaccgctatggtttggatgtcaaaccagagatggtgagttcacaagttgcttccttaatgtcaatgcctccccatcacacatttatatgatagtttgttcaatgtgcacttggaatccttaactgtcctttcccaaagaatgcaatatttacttacattttttttattagtgatgaaagaatgctcttttgtacccaggttactgactctattattaagctggcatgcttcttgcttgattgcgaatactgtgatgtgaaaaactccaagcacttgcgctggactggtgaatacattgagaaacggtctggcattaaatgtttagactgggatttgatgaaacttgctacgggtattaagatcatatgttaccccacagaaagatctacagctgaggaagcggtaaactgtaacattttcatcatggcatttttgtaatgggctgaatcgctgaagcatacctattttctttcagatgtttacacaagatgagctgtcgaagttagtgaaggatgcacataagtatgaagggaagatccgtaagagatctttcatgaatgcctacagcgagatggttgaagcccgtcaacttattcctatggcacaaaaacaactggaggacttggtaaaggaggccaaagatgcatgtgaagctgaacaaagcacatgaacgcaataagccagtcagtagcatgagagaagaacacagtcgcatgagagaagaactcagtcgccaagaatatcacatttccttaagggagaactggttttgaaatcctatcctggacactggatggtgaggctgcctgaagctgccatcctggaccaaagcgttgcattcgtgtgtttttctctgtttaattatcgacaatgggaactcactagtaattcgaccagcgttatctactcttgattgcttttgatgtttcttttcctatcaaatagttaaacttcaggttctcg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0299700, RefSeq:Os12g0299700