Os12g0435000
| Gene Name |
Os12g0435000 |
|---|---|
| Description |
Zinc finger, CCHC-type domain containing protein |
| Version |
NM_001190005.1 GI:297729140 GeneID:9266084 |
| Length |
3990 bp |
| Definition |
Oryza sativa Japonica Group Os12g0435000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:14364994..14368983 |
| Sequence Coding Region |
14364994..14365102,14366243..14366808,14367022..14367632,14367801..14368983 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:14364994..14368983 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:14364994..14368983 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgcctttctctggagcatcgctggctaggtctctaagcccagacactcacccccgtcaccataggcttcgcccttctccaaatccaccgcttcttcccctacccccagatccaccagcttccctagcctctccaaccctcgagttcttccctcctgttggtccttcccgtcagccccctactcttcctagcctgggcgtccctgcttcagatccagctttcgtcagcagaagatatcgggttccggggacgggctgccctttccggtctgcggtatcctcgccagatctgcagaatccgatgctggattcgagttctgctccaaatcctcgcctgtcttctcgatgtcaaggttcgccgaaaggtgaactgccgggattcaagcgtctttactccgatgtagttactgctcctcctcaacctccagctgccaagtcttcagatttcattgcagtgcagcctccctcaagattttcaggggcagtagcaaaggacataaggatcctgcagagtggacgtctgctcgatttgtctacccaaaatctctctgcatcagcgcaaggtacaggagacattcaagttggagagaatccttggaaagaggtcaaaggaaaacgcaggtggagaaaccactccgcattcactacaccaaacaacctggagcaaatgcattcaagaaaagcaagatttcttcaacacatggaaggcaagtgtttccgttgtttgagtacaaagcataagatcgtcgactgcagggagccgtttcgatgttggcgctgcttaaaatttggtcatctggcttccagctgtagcaagaagtttgcctataagtccaccttgcctcctctgaagactcacactgaagcttttcctgctcttgctcctctttgttttcccccacgatcgtttccatcccctcccaagtccccgatcatggacgacctcacagctcgtcccctcctcgactcggtggtgatctcggccacaggggagatcgagaggaaccgggaacgcttctcggcccattccttggtggcatggcaagtgggtgcccaagaaggaagggtcgagctcaacacgtttgcagatgacgtcccctcagccttcaacatcagaagagctgacatccaattcaccaagttccacccagaagacttcttcatcacttgctccaaccaggcggctaaggtgataggccggaagtgctccattcactatgttgaagagtactctcgccgccgcaactacaaccggaccttcgatttgtggatttggacggatgagccgagagctatcccgcgtggaggtaccttcgctattacctctgctgatgaagaaggactggccacagacattcctctgccagaccttgaaccactccgcaacccgccgccgtctgagccgaagaaagggtggacatacaatgtcttggttcatgttgacaccttggaagatctcctctctcgcaaagctcgagcttacaagtgggattatgatgttcaagacgatggcactctctacaaagaatatccactgccctgcagggcagaacctgacccaacaagaggaccggcagatgatgatgaagacaaggacagagacaatcattccaggagtcgccacaggagccgctcgctgtgggaccggttgaggaggcgatcttcaagccgcagtagggagccggacagaagagacggccactgccaagacaatgaaaacagggggcgtccgcgcaaccgggaacgctccgagcatagaagcagaagctgtcgttctcgtgatcctagcgaggggagcgaggaggttcttaccctcctggagagccatctcgaccctatgcttcatgaggcaaccgtacagcactccatctattcgccagacacatcctctccgcgtgctgtttcccctgtttttgtgccttcttttgcagtacagggaacctcgcaagaggagttggcggcaacccaggcaagccctgtccaggagttcattgctgctctgtcaacaccagtgcagccgcctctcctgcctgctccggaaacacaagctcgccgtccgggaagagcaaaggtgacaatcccggcgctttcttcagctcagcgtcacagcgaacgcctgcttcgcaagcgacgagcaggggcaaagcttgaatcttttgctcaggaaatcctatctaaaaattttggtataatggacgaaagatcttcctttgatcataacatcaaaaagatttatttgcagcgctacaagaagcctctgtctccagcgtccctgaagacaattgcagaattggtggagaagggaggctgcaaaagcattcgcctgaaggcttccaagaaggcgacggtggcgcccctattcctggacaaatccaatcttgtcaaccaacagattagccatcatccgtttaaagctccggcgtctagctcaagatctcaaaagatggagtcgcaatcacgtgggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MSPFSGASLARSLSPDTHPRHHRLRPSPNPPLLPLPPDPPASLA SPTLEFFPPVGPSRQPPTLPSLGVPASDPAFVSRRYRVPGTGCPFRSAVSSPDLQNPM LDSSSAPNPRLSSRCQGSPKGELPGFKRLYSDVVTAPPQPPAAKSSDFIAVQPPSRFS GAVAKDIRILQSGRLLDLSTQNLSASAQGTGDIQVGENPWKEVKGKRRWRNHSAFTTP NNLEQMHSRKARFLQHMEGKCFRCLSTKHKIVDCREPFRCWRCLKFGHLASSCSKKFA YKSTLPPLKTHTEAFPALAPLCFPPRSFPSPPKSPIMDDLTARPLLDSVVISATGEIE RNRERFSAHSLVAWQVGAQEGRVELNTFADDVPSAFNIRRADIQFTKFHPEDFFITCS NQAAKVIGRKCSIHYVEEYSRRRNYNRTFDLWIWTDEPRAIPRGGTFAITSADEEGLA TDIPLPDLEPLRNPPPSEPKKGWTYNVLVHVDTLEDLLSRKARAYKWDYDVQDDGTLY KEYPLPCRAEPDPTRGPADDDEDKDRDNHSRSRHRSRSLWDRLRRRSSSRSREPDRRD GHCQDNENRGRPRNRERSEHRSRSCRSRDPSEGSEEVLTLLESHLDPMLHEATVQHSI YSPDTSSPRAVSPVFVPSFAVQGTSQEELAATQASPVQEFIAALSTPVQPPLLPAPET QARRPGRAKVTIPALSSAQRHSERLLRKRRAGAKLESFAQEILSKNFGIMDERSSFDH NIKKIYLQRYKKPLSPASLKTIAELVEKGGCKSIRLKASKKATVAPLFLDKSNLVNQQ ISHHPFKAPASSSRSQKMESQSRG</aaseq> |
| Gene Sequence |
<dnaseqindica>3882..3990#2176..2741#1352..1962#1..1183#atgtcgcctttctctggagcatcgctggctaggtctctaagcccagacactcacccccgtcaccataggcttcgcccttctccaaatccaccgcttcttcccctacccccagatccaccagcttccctagcctctccaaccctcgagttcttccctcctgttggtccttcccgtcagccccctactcttcctagcctgggcgtccctgcttcagatccagctttcgtcagcagaagatatcgggttccggggacgggctgccctttccggtctgcggtatcctcgccagatctgcagaatccgatgctggattcgagttctgctccaaatcctcgcctgtcttctcgatgtcaaggttcgccgaaaggtgaactgccgggattcaagcgtctttactccgatgtagttactgctcctcctcaacctccagctgccaagtcttcagatttcattgcagtgcagcctccctcaagattttcaggggcagtagcaaaggacataaggatcctgcagagtggacgtctgctcgatttgtctacccaaaatctctctgcatcagcgcaaggtacaggagacattcaagttggagagaatccttggaaagaggtcaaaggaaaacgcaggtggagaaaccactccgcattcactacaccaaacaacctggagcaaatgcattcaagaaaagcaagatttcttcaacacatggaaggcaagtgtttccgttgtttgagtacaaagcataagatcgtcgactgcagggagccgtttcgatgttggcgctgcttaaaatttggtcatctggcttccagctgtagcaagaagtttgcctataagtccaccttgcctcctctgaagactcacactgaagcttttcctgctcttgctcctctttgttttcccccacgatcgtttccatcccctcccaagtccccgatcatggacgacctcacagctcgtcccctcctcgactcggtggtgatctcggccacaggggagatcgagaggaaccgggaacgcttctcggcccattccttggtggcatggcaagtgggtgcccaagaaggaagggtcgagctcaacacgtttgcagatgacgtcccctcagccttcaacatcagaagagctgacatccaattcaccaagttccacccagaagacttcttcatcacttgctccaaccagggtgatcgagacgcaatacttcgccagccaagacttgccacggcttccgggagggtgtatgtttttcgtccttgggacgaaagcctgcacggcgtcgaggcaaggttccggtaccgagcacgagtatgcattgaggggatcccaatgcatgtgtgaactgatgaagcagcggctaaggtgataggccggaagtgctccattcactatgttgaagagtactctcgccgccgcaactacaaccggaccttcgatttgtggatttggacggatgagccgagagctatcccgcgtggaggtaccttcgctattacctctgctgatgaagaaggactggccacagacattcctctgccagaccttgaaccactccgcaacccgccgccgtctgagccgaagaaagggtggacatacaatgtcttggttcatgttgacaccttggaagatctcctctctcgcaaagctcgagcttacaagtgggattatgatgttcaagacgatggcactctctacaaagaatatccactgccctgcagggcagaacctgacccaacaagaggaccggcagatgatgatgaagacaaggacagagacaatcattccaggagtcgccacaggagccgctcgctgtgggaccggttgaggaggcgatcttcaagccgcagtagggagccggacagaagagacggccactgccaagacaatgaaaacagggggcgtccgcgcaaccgggaacgctccgagcatagaagcagaagctgtcgttctcgtgatcctagcgaggtgagaccgcctttctcttcgcgctccatctctcaagatgactctgttcaggctactcttccactttcctctactccgtctgcttcaccttgcaagctacagaattccctacgtagtccgagccctgatgggggcgctgccgcaagcccttctctcaactagcacatccctgatcagtccatccttcaagctgattcttgcttctcctcgcaggggagcgaggaggttcttaccctcctggagagccatctcgaccctatgcttcatgaggcaaccgtacagcactccatctattcgccagacacatcctctccgcgtgctgtttcccctgtttttgtgccttcttttgcagtacagggaacctcgcaagaggagttggcggcaacccaggcaagccctgtccaggagttcattgctgctctgtcaacaccagtgcagccgcctctcctgcctgctccggaaacacaagctcgccgtccgggaagagcaaaggtgacaatcccggcgctttcttcagctcagcgtcacagcgaacgcctgcttcgcaagcgacgagcaggggcaaagcttgaatcttttgctcaggaaatcctatctaaaaattttggtataatggacgaaagatcttcctttgatcataacatcaaaaagatttatttgcagcgctacaagaagcctctgtctccagcgtccctgaagacaattgcagaattggtggagaagggaggctgcaaaagcattcgcctgaaggcttccaagaaggcgacggtggcgcccctgtaagcggttgactgccaagcttgaagcgctcagcattggccatggaaaggaacaacctgagaagatttagctcatctctcctctctctgtcttttcttagtccgtgtcaaagatgtaaggttcccctttgcctgtgtttcttccaactgtgttggtcgtgtttcggcaaaggagcaatgaacttctcctccaagctagttagtgccagttgctgcttgtgttcccatcaaagatgtaaagttcccctttgcctttgtttcttccaactgtgttggtcgtgtttcggcaaaggagcaatgaacttctccaagctagttagtgccagctgtttgcttttgttcccatgtcacaagaaaatgtctatctgtttaattggaatgtgagaggtttaaattccaaagcaaagcaggattctgtgagatgtattttacaacagcatggtgcaaccatcgtatgtctacaggaaactaagttgtcttctatcagtgatcgcattattctcaatactctgggccagagatttcttcggcactgtgtttctctaccggccaccggcacaaggggtggcgttctgcttgcttgtgatgagaattacttctccatttcagatgtactccttggcacctactctgtatctgcagtgttaacaatgaggggagaggggcttcaatggtctatcacggtggtttataggccacagttagagccagataaaatcaattttctttctgaacttgaagctctgcagacctctatgaaatctgcttggctcattattggagatttcaacctaatatataaagcttcagacaagaacaacgaccgacataatagaaggatgatgcaacgttttcgtggcctcattgacaaattgcaggtgaaagaactgtacctcccagggcgtaggtttagctgggcgggagagggcataaacccaactcaaacaaaaattgatcgcgcctttgttacaactgattgggacatgatgtttgactgctcgaatctttaccctctgtcatccgcatgctctgatcatgctccccttcttctggttggaaatgagaaaatgaatagatttccaagtttcagatttgaagctttttggctgaaaattcctggctttcttgacattgtgacagattcctggacaaatccaatcttgtcaaccaacagattagccatcatccgtttaaagctccggcgtctagctcaagatctcaaaagatggagtcgcaatcacgtgggtga</dnaseqindica> |
| External Link(s) |
