Os12g0445200

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0445200| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001073243.2 GI:297613114 GeneID:4352152| ...")
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Gene Name

Os12g0445200

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001073243.2 GI:297613114 GeneID:4352152

Length

5130 bp

Definition

Oryza sativa Japonica Group Os12g0445200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15154362..15159491

Sequence Coding Region

15154362..15155069,15159192..15159491

Expression

GEO Profiles:Os12g0445200

Genome Context

<gbrowseImage1> name=NC_008405:15154362..15159491 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:15154362..15159491 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccctgtcccagatagtcaccagggtcacgtcgctgcacccgtccaagatcccgtgcctgcgccgcctgatgcgcgtgctcaccctcaccggcgtcttcgcagtcgagacgacggagccggtagacggcgcggcggccgacgagctgccggccgccgtctacgcgctcacgccggcgtcccgcctcctcctcgtcggctccgggaaccaccaccagcaggcgtcgctcatgtcaatgctgctccacccgagcttcatcgcctccttcctccggatcagcgactggctccagcgcgagctgccgggcccgtgcatcttcgagcacacccatggccggagcatgtgggagatggccgacgacgacgcggccttcaacaaggtcgtcaacaataggatggtctccgacagccgcttggtgatggacgtcgtcgtcagggagcacggcgaggtgtcccgcgggatcagctcactggtggacgtcgccgggggccacggcacggcggcgcgggccatcgccgaggcgttcccggaggtgagatgcaccgtgctggacctcccccacgtcgtcgccggggctcccgttggcgccggccccggcgtggagtacgtcgccggcgacatgttcgagagcgtcccaccggcaaacgctgtcttcctcaagtggattatgcatgactggggcgatgatgaatgtgtcaagatactaaagaactgcaagaaagccattccatctagagatgctggaggaaaggtaatagtcgtagacatggtggtcggagtagggccacctgatcaaaagcatttagagatgcagaccttgtttgatgcatacatcatgcttatcaatggtgtggagcgagacgagcaagagtggaagaaggttttcgtcgaagccgggtttagtgactacaagatcatgccagttctaggctccaggtcaatcattgaggtttacccttaa</cdnaseq>

Protein Sequence

<aaseq>MDLGIADAIHHHGGAATLSQIVTRVTSLHPSKIPCLRRLMRVLT LTGVFAVETTEPVDGAAADELPAAVYALTPASRLLLVGSGNHHQQASLMSMLLHPSFI ASFLRISDWLQRELPGPCIFEHTHGRSMWEMADDDAAFNKVVNNRMVSDSRLVMDVVV REHGEVSRGISSLVDVAGGHGTAARAIAEAFPEVRCTVLDLPHVVAGAPVGAGPGVEY VAGDMFESVPPANAVFLKWIMHDWGDDECVKILKNCKKAIPSRDAGGKVIVVDMVVGV GPPDQKHLEMQTLFDAYIMLINGVERDEQEWKKVFVEAGFSDYKIMPVLGSRSIIEVY P</aaseq>

Gene Sequence

<dnaseqindica>1..708#4831..5130#atggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccctgtcccagatagtcaccagggtcacgtcgctgcacccgtccaagatcccgtgcctgcgccgcctgatgcgcgtgctcaccctcaccggcgtcttcgcagtcgagacgacggagccggtagacggcgcggcggccgacgagctgccggccgccgtctacgcgctcacgccggcgtcccgcctcctcctcgtcggctccgggaaccaccaccagcaggcgtcgctcatgtcaatgctgctccacccgagcttcatcgcctccttcctccggatcagcgactggctccagcgcgagctgccgggcccgtgcatcttcgagcacacccatggccggagcatgtgggagatggccgacgacgacgcggccttcaacaaggtcgtcaacaataggatggtctccgacagccgcttggtgatggacgtcgtcgtcagggagcacggcgaggtgtcccgcgggatcagctcactggtggacgtcgccgggggccacggcacggcggcgcgggccatcgccgaggcgttcccggaggtgagatgcaccgtgctggacctcccccacgtcgtcgccggggctcccgttggcgccggccccggcgtggagtacgtcgccggcgacatgttcgagagcgtcccaccggcaaacgctgtcttcctcaaggtataatgttaatggcgtcctaattctcactctcaactgttacgttttgttctgatcttgttgtcacgtgctatgcatggagttggcctaacatgcatgcatgtcaaatggcaattgaattagccgagccacttacttctgccttactatttgacgataactagggtggacagaaagctcgtggctcgttagctggctcggctcgtgacaggctcggcttggttcggctcatttgaattttctaacgagccgagctggcattttagctctttagagataacgagccagctcgagctggctcgcgagccttaacgagttaggactccatcacagcccaaaagcccaatacaacaaaaaggcccaagcccaagacactgcaaaccctatcctcactcctcactcaattccccactctccccagcagccgccgccactctgcctctcccccagccactgccgctccacctctcccccagccgccgccgccgctccgcctctcccccagccgccaccgcctccgccgccgctaggagatcgagtgcccgccgccgctcgtctctgcctctcccccgcaagcgcccgccgccgccggtctcctcctctccctcgccagcgcccgccgccgacgggaaatcgagcgcccaccgccgccggtctttgcctatcccccaacacccgccgccgccaggagatcgagcgcccaccgccgctgatctccgcctctcccccagcaatccagcgcccgctgccaccggcgctcgcccccagcacccgacgctgccggcgagctcgagctcgtctcctccaagtgccggcggagctgcgtcgagttcatcccctccaccgtcgagctcctccctgtggtcgccggcgagctcgagctattttcctccgccgtcaagctcctcccctcctccccgtgcttgccggctacgtctcttgcccctagcttgcgagcttaacgagctggctcaagcttgttgacgagccgagccaagctaggtttctagctcgttaggataacaagccgagccgagttagctcgttatcctaacgagccagccgagttagctcgttatcctaacgagccagaccgagccgagccgagctagctcgacatccacccctaacgacaacataatatttgctatcatcataacaataattagtcaaaaatacgatcactcgtatcgagtagtaaacatgatccacaataatatagataagctacatgttagcataataaatagtacgtactactgcaatctgcatataagaatggagatgaatttatatacatcattgtcactatcaaagtatcccacagtcaaagtttaacttcgatatgatcacaagacaaaatcatgtcttagtgccgtttaacgaactaagattatttcagtagctctaaatcatgccatgcaggtaggtaataaatatttacttccgtactgcactagtaataatattaataatatttttactagcaatacagttatacaataaacactgggcgtgctatatatatatagtagtcttacagactattataccatgtatttgtattcatgtagctctttttataagctgttaggaaaaaaatgttcacagtttaaagaatatagaaattacaagtataccactactggagaaaccatctttcgtgggttggccaaaatcaacaatagtcccggttcaactaaaaaccgtttagtcccgatttaaaagtgcaaagggactatatgatgtttagtcttggatggtaaatctttagtcccggttctatttgtttctgacgatgtcagggcgccaaggatatttagagataactagagacttgacttcctcatccgacttagattccctcatcatcttctctcgctgagatttttagtcccgagaccagatcgagatctccattctccactggatttttcacattttgatccttttgaaaaacttatttcgcaagtagatctctagaaaaacttatcccaaaaatggtcctttttggggcgccagagtggctggcgccatcgttcaacaggacggcgccagcctctttggcgccgtcccaccgccgacgtggcggggcgatgctaaggtggctagggggagtgcgccagagtggctggcgccccccccccccccccgaaattttttatttttgttttatttgtttgatatttttttcacgcttagggacacacaagaaccaaccatagaaaaattgaactcaaatggatgtaatatgtgatatgtagaatttttcctctcctctcctctctctgaactagtgcagaggagagagatgtgcaacttttttatttttattttatttttttgatatttttttcacacttaggaactcacaggaaccaaccacgtaaaaaataaactcaaacggacaaaatatgtggcatgtggaattttccaaagctccaccgaaaaacttctctcctcgaaaacacaatcttgcaagcggaatttggaggttttaatatcgccgaacccggcaaagcggaggagaatcggatataactttttctgtagatgtccgtacatatattatttgcctgattccgagtccgtatgagaaagttacgcctattttaatagatggcatattttgtccgttttgatagagtttcggaaaattctacatgtcacatattttgtccgtttgagtttattttttatacggttggttcctatgttctcctaagtgtgaaaaaaatatcaaaaaaatgaaataaaaataaaaaaattgcatctctatgtactgtttaacttatatatgtcatttcatgtggttatattttgaattagattaagtaatttcatatagtggtagagtgcattatttttaacatgctgatcaaagggttttactaaacgagttatggtctaattttagtaaaggtgcaaagtagactaagtggtatgctagatattttcagacttagctaagtggtagttcgagtttaaattttttttgtggttggttgtatcgtgatcctgagtgtgaaaaaacatccgaaaaaataaaataaaaataacaccgttgcaactccatacagggaaacaggaatggaggcggcggcgccagccatgctggcgcccttctccctggggaggcgccagcatggctggcgccctcctcctgccacgtcggttcgcgtacgccacggtggcaggaggacggcgccagagaggctggcgccgtcccgttggatggcggcgccagccactctggcgccccaaaaaggaccatttctgtgataagttttttcaagggtctatttgcgaaataagtttttcaaaaggatcaaaatgtgaaaaatccagccattctccatgcctcttctctcgccgtctctcttactctctctctctctctctctcgctctctcgcaacgggctcgataggagaagcggtggcggccgcgctgggaagacgccgggagaagcggtggcgatcgccgggcgggggctgcagcggccaggctggggactaaagatgggtacctttaatcccggattcgcggtcccggttgtataaccgggactacatatgggggtaacgaaccgggattaaaaacactttctaccattctactactctaccttcccatcatgttggactgtacaacaataatttatataattcaagataaaaattgctaagcaccgtgctacttgttgtggactctcaattagtatccttgttaatgaataaccaatttttgaagtgttaattgccaaatcgtgtctatcacgactcattattaatcttagttattatttataactaatttcataaatcgaagttaacaattacaaagcatgactcagcttggagggccaattttattgcttcaattacgtaatttttctagaaaaatcgaaataacataaatatgaagtcattccggtcttatattctgaatttaattattgtattaatttgatcatagcgaaaattcgagatcagtaattgacagtttgtaattagtatggtgtttttgtttaacctaagccataatttgtaatttctaaatagtacagaatgttatttatttacctcgtgactctctcattatgtttgctatatatattcagtggattatgcatgactggggcgatgatgaatgtgtcaagatactaaagaactgcaagaaagccattccatctagagatgctggaggaaaggtaatagtcgtagacatggtggtcggagtagggccacctgatcaaaagcatttagagatgcagaccttgtttgatgcatacatcatgcttatcaatggtgtggagcgagacgagcaagagtggaagaaggttttcgtcgaagccgggtttagtgactacaagatcatgccagttctaggctccaggtcaatcattgaggtttacccttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0445200, RefSeq:Os12g0445200