Os12g0446500

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0446500| Description = Conserved hypothetical protein| Version = NM_001073246.2 GI:297613116 GeneID:4352155| Length = 2069 bp| Definition ...")
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Gene Name

Os12g0446500

Description

Conserved hypothetical protein

Version

NM_001073246.2 GI:297613116 GeneID:4352155

Length

2069 bp

Definition

Oryza sativa Japonica Group Os12g0446500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15270553..15272621

Sequence Coding Region

15270554..15272452

Expression

GEO Profiles:Os12g0446500

Genome Context

<gbrowseImage1> name=NC_008405:15270553..15272621 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:15270553..15272621 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttaacagcttttgtctccaaagctgatggtgatgtcttttattcatttgatgaagaaaagacaggttccccttctgtgaaaccatcgttgaatgcaaaagtgatggtcccagaaaaaccagtgccaaaagcagagttgatgctgccgttgaaagaaaacctgcgatcccacagcaggacaccaaaggaggaccttaggaagcagcttcaggcagaaattttacagaagagaactgctgaaattgcaatgaatagtaatgcctccaatcataaattgctggagggacaaggccttagagctatgcgtgaacctgttgcatacaagagcacaagggatattccctgttccaatcggttggagattcaggtggataagcagaatgaggctatcctattaccaatatatggagttattgtccccttccatgtttgtactgtaaaaaaagcagaaatccgtggggatagcaacagaggagtctatgtctgtattacatttaatgtccctggcactgcttccaatctccaagatccctgcctgaagacaaatgcaaatcgcattttcttaaaagcagtcaccttcatttcaaaagacagaaagcatgctgacgaggctattcaattaatgaggattattcaaagaggagtattagaaagagctaagagagctagtttggtcagtcaggaaaggcttcaactatgtgatagaatgactagggacaggattcagttgatggacttgtggatacgcccaacttttgctggtcgtgggcgtaaatcccctggaattttggtgctccatgtcaatggttttcagtattccgcatctaaatctgaaaaaattgaaatcatgttctgcaatgtcaagcatgcgttcttccagccagctgagaaggagatgataactctcctccacttccatctttacaatgatatcatggtgggcaacaagaagactagagatgtgcagttctacattgaagtgatggatactgtagattcagttggtctgaggcgccgaacagcatgggatcctgatgaaattgaagaagagcagcgggaaagggcacggaggagcggaataaacaggcagtttgagctctttgtgaaaagggtcaattccatttggtctcagccaaggtttgagcagctcggcttgcagtttgaaactccatcgcaaaagcttgggttcaatggagtccacggcagaacaacatgctttattgttcctactccaagttgcctggttcaactggttgaatcgccgttccttgtaacttctctgagggaggttgacatcgtatgcctggaaagggtggcgctggggcagaaatccttcgacatggttttcgtgttccaagacctgaagcgagatgttatccgcatagaggtcattccaatgacctccattgatgggattaaagattggctcaatggctgcaacctgaagtactacgaaagcaagctgaacctcagttggcgtaaggtcctgaaggaggttatgaacaataaagagtcagacgagaacaataggtgggagttcttgaacccagatgctagcgactcggactcggagagctcacagacagaagatgatcagtatgaaccatcagatgccgactcatgctctgaatcggatgacgaagacagtgacagtgaatctgtggtggattctggtgaagacgacggtgccatggatggttcagaagatgatggtggtgatgctgccgaatcgtgggatgagatggagcgcaaggcgagggacgccgacatggagatgggcagtgagtcggacagcgaagacgagaggcagcggcgaagggagaaagcactggccaagtctcggtgtcctagtcatccacaggccaagggtgctgcgcacaagaggcagcgaattaactag</cdnaseq>

Protein Sequence

<aaseq>LTAFVSKADGDVFYSFDEEKTGSPSVKPSLNAKVMVPEKPVPKA ELMLPLKENLRSHSRTPKEDLRKQLQAEILQKRTAEIAMNSNASNHKLLEGQGLRAMR EPVAYKSTRDIPCSNRLEIQVDKQNEAILLPIYGVIVPFHVCTVKKAEIRGDSNRGVY VCITFNVPGTASNLQDPCLKTNANRIFLKAVTFISKDRKHADEAIQLMRIIQRGVLER AKRASLVSQERLQLCDRMTRDRIQLMDLWIRPTFAGRGRKSPGILVLHVNGFQYSASK SEKIEIMFCNVKHAFFQPAEKEMITLLHFHLYNDIMVGNKKTRDVQFYIEVMDTVDSV GLRRRTAWDPDEIEEEQRERARRSGINRQFELFVKRVNSIWSQPRFEQLGLQFETPSQ KLGFNGVHGRTTCFIVPTPSCLVQLVESPFLVTSLREVDIVCLERVALGQKSFDMVFV FQDLKRDVIRIEVIPMTSIDGIKDWLNGCNLKYYESKLNLSWRKVLKEVMNNKESDEN NRWEFLNPDASDSDSESSQTEDDQYEPSDADSCSESDDEDSDSESVVDSGEDDGAMDG SEDDGGDAAESWDEMERKARDADMEMGSESDSEDERQRRREKALAKSRCPSHPQAKGA AHKRQRIN</aaseq>

Gene Sequence

<dnaseqindica>2..1900#cttaacagcttttgtctccaaagctgatggtgatgtcttttattcatttgatgaagaaaagacaggttccccttctgtgaaaccatcgttgaatgcaaaagtgatggtcccagaaaaaccagtgccaaaagcagagttgatgctgccgttgaaagaaaacctgcgatcccacagcaggacaccaaaggaggaccttaggaagcagcttcaggcagaaattttacagaagagaactgctgaaattgcaatgaatagtaatgcctccaatcataaattgctggagggacaaggccttagagctatgcgtgaacctgttgcatacaagagcacaagggatattccctgttccaatcggttggagattcaggtggataagcagaatgaggctatcctattaccaatatatggagttattgtccccttccatgtttgtactgtaaaaaaagcagaaatccgtggggatagcaacagaggagtctatgtctgtattacatttaatgtccctggcactgcttccaatctccaagatccctgcctgaagacaaatgcaaatcgcattttcttaaaagcagtcaccttcatttcaaaagacagaaagcatgctgacgaggctattcaattaatgaggattattcaaagaggagtattagaaagagctaagagagctagtttggtcagtcaggaaaggcttcaactatgtgatagaatgactagggacaggattcagttgatggacttgtggatacgcccaacttttgctggtcgtgggcgtaaatcccctggaattttggtgctccatgtcaatggttttcagtattccgcatctaaatctgaaaaaattgaaatcatgttctgcaatgtcaagcatgcgttcttccagccagctgagaaggagatgataactctcctccacttccatctttacaatgatatcatggtgggcaacaagaagactagagatgtgcagttctacattgaagtgatggatactgtagattcagttggtctgaggcgccgaacagcatgggatcctgatgaaattgaagaagagcagcgggaaagggcacggaggagcggaataaacaggcagtttgagctctttgtgaaaagggtcaattccatttggtctcagccaaggtttgagcagctcggcttgcagtttgaaactccatcgcaaaagcttgggttcaatggagtccacggcagaacaacatgctttattgttcctactccaagttgcctggttcaactggttgaatcgccgttccttgtaacttctctgagggaggttgacatcgtatgcctggaaagggtggcgctggggcagaaatccttcgacatggttttcgtgttccaagacctgaagcgagatgttatccgcatagaggtcattccaatgacctccattgatgggattaaagattggctcaatggctgcaacctgaagtactacgaaagcaagctgaacctcagttggcgtaaggtcctgaaggaggttatgaacaataaagagtcagacgagaacaataggtgggagttcttgaacccagatgctagcgactcggactcggagagctcacagacagaagatgatcagtatgaaccatcagatgccgactcatgctctgaatcggatgacgaagacagtgacagtgaatctgtggtggattctggtgaagacgacggtgccatggatggttcagaagatgatggtggtgatgctgccgaatcgtgggatgagatggagcgcaaggcgagggacgccgacatggagatgggcagtgagtcggacagcgaagacgagaggcagcggcgaagggagaaagcactggccaagtctcggtgtcctagtcatccacaggccaagggtgctgcgcacaagaggcagcgaattaactagttctcagataatggaagtttagcttgttcttgtggcactttattatgcatctgtcgctttttacctgtcgttagtttcggtggtgaacttttgatatgttcttctaggtactttgcataagtacattactttgtcagcataagtgactcgaagaatgttcagttttcta</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0446500, RefSeq:Os12g0446500