Os12g0458100

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0458100| Description = Transferase family protein| Version = NM_001073265.1 GI:115488491 GeneID:4352177| Length = 7208 bp| Definition = Or...")
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Gene Name

Os12g0458100

Description

Transferase family protein

Version

NM_001073265.1 GI:115488491 GeneID:4352177

Length

7208 bp

Definition

Oryza sativa Japonica Group Os12g0458100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16146339..16153546

Sequence Coding Region

16146702..16147601,16152985..16153425

Expression

GEO Profiles:Os12g0458100

Genome Context

<gbrowseImage1> name=NC_008405:16146339..16153546 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:16146339..16153546 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcttgattcgttcacggcacgccggggaaaccccgagctggttgcgccggcgagggcgacgcctcgcgaaaccaagccgctctccgacctcgacgaccactgggacctgcgctacctgcagccaagcctcgagttcttccgcgtggtcgacggcgatcgtcggccggcgaggccaggggacggcatcaaggcggccctagcggaggccctcgtgtactactacccgatcgccggccgcctgcgggagctgcccacgggccacatgctcgccgtggagtgcaccgccgaaggggtggtctttgtggaggcagaggcagacgtggcgttggaggacttcggcgagccgctgatgccgacgttccatggcgccgaggggttcctgtgcgatgttggagacaccagagtcatcgttgggagaccactgttttacctgcagatcacttatctcaaatgtggaggatttgtccttggaacttacatgtgtcattgcatagctgatgccttcggcacaattcaattcttgaaagctatagttgatatagcacgtggtgaggcaaaaccaaccacgttgccagtttgggaaagggagctctttctcgcaacaagtctacaaccccacatcaaagaagaccaaaagaaattatttgatgaactggagagcaccacatgtgatgatattatggtgacaatgcctactgaaaacatggtttctgaatactttattctctctcaaatagatatggctgcactaaggcgtcatgttccattaaatctcaataaaacagtcacgagctttgagctactaactgcagttacatggcgttcccgtactatagcacttggctacagaccttgccatattgtacgcttgatgattgttgtgaatgcacgtgggagatggaagaagcttcctttgggatactatggcaatgggcttttgtgctctgtcattgagacaacagtcaatgacttgtgcacaaacccgttaggacacacaattgaactcgtccggaaggctaaagacgagatgaagacagaagaaaatatgcaattgagagtagatttattgccattgtggcgtgaaaaaccgtacataaaagtacagagaatatttgaagcatgtgacataaaatggattgggcaggatactttggatattggatgggctaagaggataggaggtggcataccgactgttagtccgccaaatttgacaagctaccaattcttgtgcaagaatgaaaaaggtgaaaagtcaaccgtcatctccatgttgttgccacaacctgcaatggatagattcaaaaaggagatggctgcttggttaattgaataa</cdnaseq>

Protein Sequence

<aaseq>MKLDSFTARRGNPELVAPARATPRETKPLSDLDDHWDLRYLQPS LEFFRVVDGDRRPARPGDGIKAALAEALVYYYPIAGRLRELPTGHMLAVECTAEGVVF VEAEADVALEDFGEPLMPTFHGAEGFLCDVGDTRVIVGRPLFYLQITYLKCGGFVLGT YMCHCIADAFGTIQFLKAIVDIARGEAKPTTLPVWERELFLATSLQPHIKEDQKKLFD ELESTTCDDIMVTMPTENMVSEYFILSQIDMAALRRHVPLNLNKTVTSFELLTAVTWR SRTIALGYRPCHIVRLMIVVNARGRWKKLPLGYYGNGLLCSVIETTVNDLCTNPLGHT IELVRKAKDEMKTEENMQLRVDLLPLWREKPYIKVQRIFEACDIKWIGQDTLDIGWAK RIGGGIPTVSPPNLTSYQFLCKNEKGEKSTVISMLLPQPAMDRFKKEMAAWLIE</aaseq>

Gene Sequence

<dnaseqindica>5946..6845#122..562#aagaacggagagacaaaaccagctgcattatagcacacaccagtcgtgtctacgtacacaaattgttgtcgcacacataattatcatccatcgatccatccatacaaacgtacgtagaatcatgaagcttgattcgttcacggcacgccggggaaaccccgagctggttgcgccggcgagggcgacgcctcgcgaaaccaagccgctctccgacctcgacgaccactgggacctgcgctacctgcagccaagcctcgagttcttccgcgtggtcgacggcgatcgtcggccggcgaggccaggggacggcatcaaggcggccctagcggaggccctcgtgtactactacccgatcgccggccgcctgcgggagctgcccacgggccacatgctcgccgtggagtgcaccgccgaaggggtggtctttgtggaggcagaggcagacgtggcgttggaggacttcggcgagccgctgatgccgacgttccatggcgccgaggggttcctgtgcgatgttggagacaccagagtcatcgttgggagaccactgttttacctgcaggtaaatccagcatgcatgcatggattgaccattactcatatatatgtgcttaattgatcaaaatgtttattcggcagtatccaaacacctttgagtccttgagatacatatgctttgaaacaccacttgattatattgcatccattaagaacggttttgcacaaaatatgaccccatattttcttgcaaaaattgcaaaaaccacccccgtatgtttagatttctttcaatgagacaattagttgcaaatacccttcctagctaattcacatttgtttaatttttctcaacgtttaccgtctttcacgtgtctttttttcacttccacatgtactttgacatgacttagcgtatctgttgatgaataaggacccaagcacatcttttaaaagagaaatgatcacattgagctcatctttctcattttgaatctatcaaagaaaccagctactgccaaactctataaggcaaacgcaatagcttatgttcggtgactctgaggctttgtctctgatgttcatagcgaaaactctggatcaccgtcaccgtcacccatgactcgctggccgccgtgattagggatgcctcaattgtgtcaacgggtatggccgacatgagtgtttaccatggctcctcgtttattagtattcatatagcgcatgtgtggtttatggccatgaaaatggcggagtaacggcaattagggggaatctcaaaccaaggggcatgaaaatggcggagtataacagcaattagggggaatctcaaaccaaggaggattaaaagtgggtattaatttgcaatgaatggtcttataccaggaattctgaacttatggtgacatgtggggtggtttttgcatttttccctattttcttatttggttttaggcacttttctccctgtgtgattgttatatttattctcttatatatttctactatcccttcttccaagtaggtaattgattgtttttatcctaattcttttatattacgtgtattataaacaattgaagagtaagttttaaaattaactagtgcaaattatgtaatttataatgtaaaaatgatttttttaaaaaaaattggccatcaccataaatatagctagcggggactaaaatagagcaattttgagatcctcagtagtgccatttggctgtaataaatgtttggaataagtttgtcagcgcgcggtccctcaactttatgttgggtttatatatcacattcctaatctataataccagaaatcttcacccatgaactatataaaaccgtgtaattttagtcccatggtagcatgatctccgatttcaccgacgtgacatcgtagtcaacaaaatagaaaataaaaaaataatagggcctacgtgtaagtgagaaaaaaaaagaagaccgctcatataagttcaccggcagccccgtcgatggctctctcgtggccgccgccggcatcgttttcagctgctgctgccgccgccaccgtcgccgccccgagcgtcttgcgacgggaggagggaagggggtgaggggaaggggaggcggccggcggaatgcagccgccgccaccacgcagatgtgcagaacagctgctggccgccgtggaagctggcgcgcacagcgacgcatatatatgatgatagatgatgtggtgtgttgtgttccatcagctagctgtgcgcagctgaattcctgccaatagctagcgcctagcggatcatatctatctcaacgtcgtcgatggcgagccatcggtaatcgggtattgatcatcggccggcctgcagctacctgtactgtatctctctaggtactgtgtgtgtgcagtgcatgctatttgtcagcaggtgatgatcggccccgggcagctgcctgatgcagcgttgcgtcgtcgtctcccctctattttaagctcaccggctactggtagtagtagagccaagaaccaaagctattttaactacggagttgctagaaatatggcgccatatgctacagtcgatttttttcagccacttacacagtagttacacctcatttacaccccacttacatatgcaattagtatgtaattttcgaatttacatatataattttagtacttacatatgtaattttgagacttacattgtaaatacactaaaattacatatgtaatttagggacttacaatgtaaatacatgccgactattttttgatgaaaaatatggcgccataaatatagctacacccttttaactatacataccattgtagcagccgaaatctggagttagcgtactgcttggaagtccatacagagaaaattccctgtgtaccctgtaatttcatccaatccctcttagatttgcttatttctttctgtacccctaaattttagtttggatctcttccatatcccttccgttaattggctgttagttgaccgttaaattcatttcacaatatctattttgcactttgaaatcaagaaaatataaatttatgaagtatattgaatgaggctataaatttattttatgcgactattatatttatgagtttattttgtgagatattgtttagcaaaaacaatattttactctcgtccccatgaaggcaaaaaaaaataattttgatctatgacaaaatttatttttagatataacaaaaaaatatctttaccattaaaatttatatatataagaaatctatttatgtgctaaaaataatttttaataactagtaaataaattcatttttttatgtcatatctaaaataaatattatttatgactttgttatgcaaaatattatttatgataatttattttttatgcgagataaaaattatttttgttaaataatatctcacaaaataaactcataaatataatagtcacatacaacaaacttatagagtccatcaatatacttcataaatttatatatttttataccaaaggttaaaaaggactttataataggaatttaacgaccaactagcggaaggggtatagaagggatccaaactgaaatttagggatatacaaacgaatgagaaaatatcaggggcatagaagggattgtgcgaacttttagggatactcaaagaattttctccatataaccttgcagcgatccgatctatcgtgttttgctgcttccatggctgacgaggggtcgtcgcgaggcaagctggtcgagccgttgcccttgcccttgcccgcgcccgatcttctccgtcacctggccggcctctagggtccaagaacaagcccaagccgctggtggttgcgacgcgggagagcaaggcggcgatgagccctgtcgtgcgggagcttgccggctacaaggtggccgcattcgtgcggtaccgacgcgtcggtgtgtctgtggctctgtgctgtgaggccgcagcactgtcgctgccaccacgctctggctcccgacctcgccggcgactgcggtaaagctgcacgggcggttcgaggtgctgtctctgtccgagacggtgctgtggtccgcagacggaggggatcgccgcaacaccgccgttctcggtgtgtctagctagggcgggagggcaggtgatcggcagcactctcgccggggagatgacggctgcggatggattggtggtggttgccggcacatacattctaaagagaagagaagaaaaaagagatacgagccccacaatttttttcttctcacttacatgtgggcctcatattgttctttattttttattttgctgattaggatgccacgttagctaaacgaaagatctatactgccatgggactgaaattgtacagttttatatagtttagggatagagatttctggtactgagaattagggatgtcataaaaactcggcgtaaagagggatggctggtgaacttattcctaaatgttttctctatcataaaatttagcatctcttggtttgtgatcgaggcattaaactaaaccaaatattattatactatggtacatatcagtatctgctctagtgtcataaaacttctcttaaaagtaaatatatctactgtccagtgcgagtgactctacccatgctccagtgtttactgtggtgagagaagaacacagttgctatattgggacttatgaattgttataggaacggccagttataaaatgagaaaattcgatccatagcacataaaaaaacctggtaccaaaaaatagcacaaaaattttttcacttcgactaaaagcacagggcaccaattttcttgcgattcatagcactcccatcacatctgccatccaaacatgtgagttcatatgaaaaaggactcatttgcccttcttccccgagctagcgctcttctccctcggtgatgttgccgcgcccatgtcgccgatgctcagtgagctgacggagccgctcttcctgcccgcccgctcgctcagccgctcccgatcggcacccgccaccatgcttcccactgttgccagcgccagatccgccgcgccgccgccggattcacgcgcgaggggtggagcaccgggaggaaggcggttgaggaggaggtggagacgccgcacctccggcccgccgggtcccggctgcctactcgtcagcggcggcctcgctcgaggtcacggagccgacaaagcccgccgcttgctagctcgcgaatcatcccaacgtccgccagcgcgcgctgcagcccgcctgcataagcggcaggtcatcgcccccgttgccgttgtcgtcatcgccgtcgtccccgtcgaagctacggccgcccacgtcatcgtcgtcaagcggccgccggcgtgggaggctcgccctcgatcagtagcgccaagcgccagacggggtccacctcatcgtcggcggcaacggcgagccacgcacccacatcgttgaagagcgcacgcgcagctcactcggcggtggcgggcgccgcgcgccgccatccatgagggagcggaagaggagacctggtggggaacgtggggaacgaagggcaaatgtgtccgacgaaaattttctccactccgatctaacgccgttacttcaaaatgtgacggaagtgctacagggcgaagaaaaatcggtggcctatgctatagatcgaaagtagaaactttttatgctattttttagtaccgctttctttcctgtgctatggatcaaattttctcttataaaattgtcataggaacgaccatgtttagatccttatatatattgagagatcccatgtttaattaactacagacaacatttgctatctgttgttgcaaaaacagagttgcagctttataactgaaaatcttttcagcatgcattgtttacagtcacaaacttcgtatatatgtatggtttttcattaacatttgtttttctttgacagatcacttatctcaaatgtggaggatttgtccttggaacttacatgtgtcattgcatagctgatgccttcggcacaattcaattcttgaaagctatagttgatatagcacgtggtgaggcaaaaccaaccacgttgccagtttgggaaagggagctctttctcgcaacaagtctacaaccccacatcaaagaagaccaaaagaaattatttgatgaactggagagcaccacatgtgatgatattatggtgacaatgcctactgaaaacatggtttctgaatactttattctctctcaaatagatatggctgcactaaggcgtcatgttccattaaatctcaataaaacagtcacgagctttgagctactaactgcagttacatggcgttcccgtactatagcacttggctacagaccttgccatattgtacgcttgatgattgttgtgaatgcacgtgggagatggaagaagcttcctttgggatactatggcaatgggcttttgtgctctgtcattgagacaacagtcaatgacttgtgcacaaacccgttaggacacacaattgaactcgtccggaaggctaaagacgagatgaagacagaagaaaatatgcaattgagagtagatttattgccattgtggcgtgaaaaaccgtacataaaagtacagagaatatttgaagcatgtgacataaaatggattgggcaggatactttggatattggatgggctaagaggataggaggtggcataccgactgttagtccgccaaatttgacaagctaccaattcttgtgcaagaatgaaaaaggtgaaaagtcaaccgtcatctccatgttgttgccacaacctgcaatggatagattcaaaaaggagatggctgcttggttaattgaataactaagaggataaataagtatatctgcttcacgtagagtaaaaccacatcatcttttatttggtcggttgctgaataagacatagtttcatcggtgttggttttgttattcagatgggcttgggcgcggatggcatttaattagttaggtcttttccatttggtgaccagtgtgttatatttatgattatgtactttattttgtggaggatcgattatcgtatagctcggtcataagtcagtgtaccattacaaaactacatcaagttgtgcattattgtgaccttgtaaaatggtgttttatgagataatcaaattgttgttcgatctggcacaccctttaataatatacctatatatggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0458100, RefSeq:Os12g0458100