Os12g0467300

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0467300| Description = Disease resistance protein family protein| Version = NM_001190012.1 GI:297729154 GeneID:9272227| Length = 6735 bp| ...")
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Gene Name

Os12g0467300

Description

Disease resistance protein family protein

Version

NM_001190012.1 GI:297729154 GeneID:9272227

Length

6735 bp

Definition

Oryza sativa Japonica Group Os12g0467300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16737330..16744064

Sequence Coding Region

16738777..16740808,16742188..16742999

Expression

GEO Profiles:Os12g0467300

Genome Context

<gbrowseImage1> name=NC_008405:16737330..16744064 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:16737330..16744064 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcagcagtgaactcttccatgggggtcatggcgccactcctcaccaaacttgccatgctgctcagcaacaagtgcaagaaactcaagggaatgcgtaagaacattgagttccttagccatgagttgaccgaaatgaatgctgtgttggagaatcttgcagatatggagaagctagatggacagcagaagctgtggaggaatgacatccgcgagatggtctacgacatcgaggactgcattgatgtcttcatgtaccatcttggtgatggtaataacaaggatggcttgctcaggaagactgcacgcaagctcaggaatttgcgtgctcgctatcagattgccgacaagattcaagaactcaaggctcgtgtcatgcaggtggctgagcgccgtgataggtatgccaatctaggtgtatctacctcaagcattcccaaagtggtggaagttgatccgcgtctacctgcactctatgaagatgcaaaaaatcttgtgggcattgacggtccatgtatggaaattactcagtggctaatggatgaagtagagaatggttcgatacaacaacttaaagttctctctgtagttggctttggaggcattggcaagacaactcttgccaaacaagtatacaaccaattgaaaaaacgattcaatttcacatcattcgtgtcagtgtctcaaaaccctgacatggttaagctgctgagaaatttactttcaggaacaggatttcaaggctacggaattcttgatgaccatcaaaagctcattgacaccctcagaggacatcttgctaataagaggtaccttattgtagttgatgacatatggaacactcaagcatggagcattattcggtgtgcttttgctcaaaataatcatggtagcagagttatagttacaacaagaatcgaagatgtagctacaaagtgttgcgttgatttccatggtatggtgtacaagatggagccacttaatgagtttaactcacaaaagttattttgtaaaaggatatttgattcggatagtattcctgagcagtataaaaatgtatcagaagatatgttaagaaaatgcaaaggtgtcccattggcaatcattagcattgctagccttttatccagtgaaggcatgaatgtgggtaagtggaagaagattcataactttatgggttctgagtcggaaacaaatcccactctagaatggatgagacatgtactgaatctgagctaccttgacctctcacataatctcaagacatgcttcctgtatctaggaatatatcctgaagaccatacaattttcaaagctgatttgataaggctatggatagctgaaggatttatccatgagaaacctggtttggatctggaggaaacagctgagagctatttcaacgaactcattaataggagtatgattaagctagatgattatcgttccagtgaggcatgtcatgtccatgaccttatgcttgaccttataatatcgaagtgccaggaggaaaacttcatcactatagcatctaagcagcctgtaaagaatgtaacaaagcttccagttcgtcgtctgtgccatcagttgtcatacggaaacttggccatggaaagaatgaaactatcacaggttcgatcctataatactttccctgcgtttggctgcagtatgcagcctcctatttctatgtttgagcatttgcgggtattggaacttagggcctattctacatccgttttccttgatttgtctgctgtgagcaacctcttcctgttgagacacttgagtatcagaggtttcaggttaaagctgcctcagaaaattgggagactccagtgtttgaggacactagatctactaggcagccttttggttactggttttccatcagatgttatttctctatcatcattgtgtcatctaacagtttcaggtgatgcagtgctgcctaatgggattcagaaactggtctctctacaaactttgttgacctttaattcagggggtttgcccgacatttttactattgtggagaaaatttctcgatttaattcatctgctatcagactggcaaaaacacgtcgtttcaacaatggaggtcttcgttctaccaatggaggtcttcgttctccccctgcctcccttgagtttccaagtttcgatgatggttggccaactgaatccattctggactacctatctcagcatctggatacaccagcttcctcacattcggacctcttctcgccaaatttggttgcttgttcaccgcatattctgaattttgcatcgttatggcttcagcaactcatcatccgtaagaacattcgcaatgtcccatcctggctgtggttttctctgaagctcacaatgctagagcttcgtgttgaggagctcagttgccgcgacgtccaatttcttgctgggctgccctgccttgttgacctcgacttgactgctcaagctacccctgagaacatcatcactaaacgcgttaccacgcgtttgggaagaatcacccataccgacaatttcccaaagctgcagaaatttgttttaacatgtgatttggcatgcctgacgtttgagccaggggcaatgccacagcttcagattctgaagctagatgacaagaagccttctaacttggaggaagggcatggcaccagtggagcggcgcaacatggcaaaactccacttattggcatcgagcacctaccaaggcttgaagaggtccaagtgacaagccactccagcaaggtgcctgcatacagggacgccgtccaaaggcatccaaggtttcaagacatacgtgccacgtttaatatctataattga</cdnaseq>

Protein Sequence

<aaseq>MMAAVNSSMGVMAPLLTKLAMLLSNKCKKLKGMRKNIEFLSHEL TEMNAVLENLADMEKLDGQQKLWRNDIREMVYDIEDCIDVFMYHLGDGNNKDGLLRKT ARKLRNLRARYQIADKIQELKARVMQVAERRDRYANLGVSTSSIPKVVEVDPRLPALY EDAKNLVGIDGPCMEITQWLMDEVENGSIQQLKVLSVVGFGGIGKTTLAKQVYNQLKK RFNFTSFVSVSQNPDMVKLLRNLLSGTGFQGYGILDDHQKLIDTLRGHLANKRYLIVV DDIWNTQAWSIIRCAFAQNNHGSRVIVTTRIEDVATKCCVDFHGMVYKMEPLNEFNSQ KLFCKRIFDSDSIPEQYKNVSEDMLRKCKGVPLAIISIASLLSSEGMNVGKWKKIHNF MGSESETNPTLEWMRHVLNLSYLDLSHNLKTCFLYLGIYPEDHTIFKADLIRLWIAEG FIHEKPGLDLEETAESYFNELINRSMIKLDDYRSSEACHVHDLMLDLIISKCQEENFI TIASKQPVKNVTKLPVRRLCHQLSYGNLAMERMKLSQVRSYNTFPAFGCSMQPPISMF EHLRVLELRAYSTSVFLDLSAVSNLFLLRHLSIRGFRLKLPQKIGRLQCLRTLDLLGS LLVTGFPSDVISLSSLCHLTVSGDAVLPNGIQKLVSLQTLLTFNSGGLPDIFTIVEKI SRFNSSAIRLAKTRRFNNGGLRSTNGGLRSPPASLEFPSFDDGWPTESILDYLSQHLD TPASSHSDLFSPNLVACSPHILNFASLWLQQLIIRKNIRNVPSWLWFSLKLTMLELRV EELSCRDVQFLAGLPCLVDLDLTAQATPENIITKRVTTRLGRITHTDNFPKLQKFVLT CDLACLTFEPGAMPQLQILKLDDKKPSNLEEGHGTSGAAQHGKTPLIGIEHLPRLEEV QVTSHSSKVPAYRDAVQRHPRFQDIRATFNIYN</aaseq>

Gene Sequence

<dnaseqindica>3257..5288#1066..1877#attccccactgatccgcagaaacccgactcctcgatccccagttccccacctcgtctcctcgagcgctcgccggcgggcggttcgccggcggcgcggcggagcacgtgctcctcttccccgatctcctcctccgcgtcgtggccgccaagctctagacgggacaggacgccatccatcctccaggttatccacttccgctcccttctgctggtaagcgctccgccgtcgcctcaatctgtcgtgggatcgagctccgcaccggtgcctccgatccgtacgtcggtctccgggccgaaggcggacggtggtcggggatggatcggccccaacgccggcgtcgtggccgggcttcggatgaatggtgtgcgggtgacgggcctgtagtccgtccgtccgtctgctgatctgcatcacgcggccaacaagtcaatagatagtgaactgtagtactgtaccactaccaatactgacatattctgaagacaaaacaaaccaattctgggaaattgtagacgagattccaagaaatttcgtgactcttgtctgattctgatgtccatcaagaggatgcaaagcaccaagttgggtcgtcatcagcacgtatgccaggtgacgggaggacacagtgacggctcatgatttggttcgtcgttccatcggcctaattttttccttttgccatacttgttagtagttgagctgtcttaatcggcctaattttcttcgtttagtcgtcttaataaaattattgttcgtttagctaggtgggtcgtctggtctagtgcttaatttgggtattgctggctttacataagtgggatatttaatattgttgctatgattatccagttttgtcatttcttgatgatggaacatataatggccaacatgtcaatcaatagcaggccccaaaggtagcaattgagaactgatcgagcttccaagaaattaaggtaggctatatggaccaatatattgcttgactgatagcaccgcttctccattcaggcatccactctgaccagctagcccattgagcaaaggcgagcaaacacattggttttatgatggcagcagtgaactcttccatgggggtcatggcgccactcctcaccaaacttgccatgctgctcagcaacaagtgcaagaaactcaagggaatgcgtaagaacattgagttccttagccatgagttgaccgaaatgaatgctgtgttggagaatcttgcagatatggagaagctagatggacagcagaagctgtggaggaatgacatccgcgagatggtctacgacatcgaggactgcattgatgtcttcatgtaccatcttggtgatggtaataacaaggatggcttgctcaggaagactgcacgcaagctcaggaatttgcgtgctcgctatcagattgccgacaagattcaagaactcaaggctcgtgtcatgcaggtggctgagcgccgtgataggtatgccaatctaggtgtatctacctcaagcattcccaaagtggtggaagttgatccgcgtctacctgcactctatgaagatgcaaaaaatcttgtgggcattgacggtccatgtatggaaattactcagtggctaatggatgaagtagagaatggttcgatacaacaacttaaagttctctctgtagttggctttggaggcattggcaagacaactcttgccaaacaagtatacaaccaattgaaaaaacgattcaatttcacatcattcgtgtcagtgtctcaaaaccctgacatggttaagctgctgagaaatttactttcaggaacaggatttcaaggctacggaattcttgatgaccatcaaaagctcattgacaccctcagaggacatcttgctaataagaggtatgtataaatccatagtttaactttgatgtggcattcatgttgagttcctatggatgtttctcatgttttctaatattttataaccatgtcttcatttctgctgtattgacttgattttgggcctgtttggatcatatcgaaatattgtctaaggttgacagctaattaggcacatttcccagattaggtgacagttcacttcgtagccacacttgtggcaaggttccttgctatggtccataatcagtactgacaacatgtgagcgctgcagtagacaaggttccttgctatggtccataatcagtactgacaacatgtgagcgctgcagtagaaggcaggccgccacgagataattagaggattagatatcccttgttgctataattaggggactagagaccccagttgctttctttatttatgtttccattcgagctggctttttttttattagagattcttgttaggggctatcctatagaaggatcagccatatcccattatgagttaagcatgtattgatatctctcttcatctcctgtgcacaagcacggccttgccctcgtgctggtcattgtcgatgcatgaggttcccttgctctcttgatccctctttgtgctagccacattaataagcccataacgttcttgctcattcagttgaaaaagtttggcacaattttatattggaaaaagtaagaattacccccctaaactatcgtggtcgaccgaattaccaccctaaacccaaaaaccagacattgctaaccctaaacttttaataacggacgaattacccccctcgactcaatctagagcggttttgtcctatgtggaatacgcgtggcaatccagtcagcattttgtttataaaagaagtgggacccacctgccatactctccccctcctcctctatctcctctctctcactcgtcccctctctcgcacgtgcgggtcgagcggcggcacgcgttctgcgcgcacggcgggcggtgggcggcgccacgggatgcggaggcagcggctgcgcgggacacggaggcggcggcggtattaatgagggtatcaatgagcttttgatcaatgagccaaatcttagtcaaatggggcacacttgggcaaattgttgcaaattatgttttcatatattgctacgattggatcctaaatgtgaaatttactaaataacttttctgcttcgatgttgattcttttgaatttatttttaataaattcctctagtattaatttgcggagtctactgttgccatatcctacaaaagaatttctctatttttctactattagttcaaaagaattatatagggaggcctcaacaaccatatgttaatctatgaaaaatatattcgtaggtaccttattgtagttgatgacatatggaacactcaagcatggagcattattcggtgtgcttttgctcaaaataatcatggtagcagagttatagttacaacaagaatcgaagatgtagctacaaagtgttgcgttgatttccatggtatggtgtacaagatggagccacttaatgagtttaactcacaaaagttattttgtaaaaggatatttgattcggatagtattcctgagcagtataaaaatgtatcagaagatatgttaagaaaatgcaaaggtgtcccattggcaatcattagcattgctagccttttatccagtgaaggcatgaatgtgggtaagtggaagaagattcataactttatgggttctgagtcggaaacaaatcccactctagaatggatgagacatgtactgaatctgagctaccttgacctctcacataatctcaagacatgcttcctgtatctaggaatatatcctgaagaccatacaattttcaaagctgatttgataaggctatggatagctgaaggatttatccatgagaaacctggtttggatctggaggaaacagctgagagctatttcaacgaactcattaataggagtatgattaagctagatgattatcgttccagtgaggcatgtcatgtccatgaccttatgcttgaccttataatatcgaagtgccaggaggaaaacttcatcactatagcatctaagcagcctgtaaagaatgtaacaaagcttccagttcgtcgtctgtgccatcagttgtcatacggaaacttggccatggaaagaatgaaactatcacaggttcgatcctataatactttccctgcgtttggctgcagtatgcagcctcctatttctatgtttgagcatttgcgggtattggaacttagggcctattctacatccgttttccttgatttgtctgctgtgagcaacctcttcctgttgagacacttgagtatcagaggtttcaggttaaagctgcctcagaaaattgggagactccagtgtttgaggacactagatctactaggcagccttttggttactggttttccatcagatgttatttctctatcatcattgtgtcatctaacagtttcaggtgatgcagtgctgcctaatgggattcagaaactggtctctctacaaactttgttgacctttaattcagggggtttgcccgacatttttactattgtggagaaaatttctcgatttaattcatctgctatcagactggcaaaaacacgtcgtttcaacaatggaggtcttcgttctaccaatggaggtcttcgttctccccctgcctcccttgagtttccaagtttcgatgatggttggccaactgaatccattctggactacctatctcagcatctggatacaccagcttcctcacattcggacctcttctcgccaaatttggttgcttgttcaccgcatattctgaattttgcatcgttatggcttcagcaactcatcatccgtaagaacattcgcaatgtcccatcctggctgtggttttctctgaagctcacaatgctagagcttcgtgttgaggagctcagttgccgcgacgtccaatttcttgctgggctgccctgccttgttgacctcgacttgactgctcaagctacccctgagaacatcatcactaaacgcgttaccacgcgtttgggaagaatcacccataccgacaatttcccaaagctgcagaaatttgttttaacatgtgatttggcatgcctgacgtttgagccaggggcaatgccacagcttcagattctgaagctagatgacaagaagccttctaacttggaggaagggcatggcaccagtggagcggcgcaacatggcaaaactccacttattggcatcgagcacctaccaaggcttgaagaggtccaagtgacaagccactccagcaaggtgcctgcatacagggacgccgtccaaaggcatccaaggtttcaagacatacgtgccacgtttaatatctataattgaagtacaaggactcagaaaatagcgctgaaaggtactcatgatatccttatactctgcgtttcttcaataattaatgtttgctgctgttttatgggaatatgttagcttgagtattccccataactgggagaagaacgctacgacatgaagcgtaccagagaagcgcagccacagttgctgctgtcttgtttgcacgacctaagcatcacactttagtacgattaaattttggggcttgtatttaagaacttgtattatgttgcgagacctgtctaggttacttgtatttgtgtatgttcaagtccttacatggcatgggcacaagcatggtctgtgagactttgcacttatattaacaaacttctctagccattctctgttgcagacttgcaatatctctcatttaggctattattggtcaaaacatgatttttgtcgatgaatgataattccatagacttgtactttcacaaaacctccaaaaattcaaggtcgaccaatgactggttttgaagtgggggaaattcaggttttttgatattccagattggaaaagcgaactttaccatttgttagatcctttcacgtccaatttatctgcttttacaggagcacactagttaatagagtgatcagctctaaaaacagcactaaagtgaggctctgcacttacaaatatgaaattttaccacacaattttctctccctttttttaggggagagtagcatcttttataagaagagaaacatgttcaatgagagcatggagaatttatttaaagttgttaggtcgcatgtaccaaccgaaactttgaatgccccctaaatgccagctgaaactactctctgcaggctctacttaatctccttgttgtgtttgtgactgacttgacacaaaaacataaatgcacacaatatccacagctgacctaagttatttcttgttatgcagacgctctcggcgatgaatacaagctactcaagggggttcaaaaagagattgcaatcctgaagcatgagctgagctgcctaattcccttctccagaagcttatcgacttaggagtggaaggacaaggtgcgggaactggcctacgatattgaggactgtatcgacatcttcctgcaccaacttcatcctagagaggacaaggatagactggtctggaaggcggtccggaagatcaaagcaactatgtgcctgcccgccatcaaatcgccctccaaattcaagaactcaaggcacatgtcgatatacatgatcgatgtatcaacctctggcgataggttcataaggatttgattcccgattgtcgttgctttatgcagaagctggaggccttgttggcatttgtaggttgtttagggcctgtttagttcgcgaaaagaaaatttttgattgtcacatcggacgtttgaccgaatatcggaaggggttttcggacacg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0467300, RefSeq:Os12g0467300