Os12g0468500

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0468500| Description = Similar to Cyclic nucleotide-gated channel C (Fragment)| Version = NM_001190015.1 GI:297729160 GeneID:9270461| Lengt...")
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Gene Name

Os12g0468500

Description

Similar to Cyclic nucleotide-gated channel C (Fragment)

Version

NM_001190015.1 GI:297729160 GeneID:9270461

Length

4529 bp

Definition

Oryza sativa Japonica Group Os12g0468500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16847364..16851892

Sequence Coding Region

16848880..16849365

Expression

GEO Profiles:Os12g0468500

Genome Context

<gbrowseImage1> name=NC_008405:16847364..16851892 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:16847364..16851892 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caattgatactacaatttcgattagatggtgggggcgttctggtacctgctatcgatcgagaggctggacgactgctggagggagaactgcagggtgctcaagttccatcagtgcaagaagtacatgtactgcggaggagggaacctggggcagtcgggtttcctggagtggaggacgatgatccggcaggtgctggtgatggagtgcgcgccggcggacgaggccgggaccgggttccagtacgggatcttcacgacggcgatccagtcgggcgtggtgtcgacgacgaacctggtcgccaaggtgctcttctgcctctggtgggggctccagaacctgagcaccgtggggcaggggctgaagacgacgcactacaagggggaggccctgttcgccatcttcctcgccgtgttcggcctcatcctcatggcgctcctcatcggcaacatgcagacgtacctgcagtcgatgacgctgcggcttga</cdnaseq>

Protein Sequence

<aaseq>QLILQFRLDGGGVLVPAIDREAGRLLEGELQGAQVPSVQEVHVL RRREPGAVGFPGVEDDDPAGAGDGVRAGGRGRDRVPVRDLHDGDPVGRGVDDEPGRQG ALLPLVGAPEPEHRGAGAEDDALQGGGPVRHLPRRVRPHPHGAPHRQHADVPAVDDAA A</aaseq>

Gene Sequence

<dnaseqindica>1517..2002#atgaggaagcaattgcatcgatcgatgtcatcagcaatggcggcggcaaaggaggcagcaggtgaggaggcgtcgtaagatgtttggcagctgcggcggcgggtacaggacgcagacgatcaacgggaggaaggggacgttcgtgcggctcgagcagcaggaggatcaggagcggcagccggcggcgacgtacaccatggacggcagcggcggcggcggcagggtgcagcacgtgatggacagctacttctcgagcgcgcccaagatccggacgcggtcggtgcgcatggcggcggcgggcgtgatgagcatcggcggctaccgggcggagcggctcaagagcatcggccgcgtgttccaggaggacctcaccaacatgtcccagaagatcttcgacccgcaggacgcgttcctggtgcggatgaaccgcctcttcgtcatggcctgcatcgtctccgtcgccgtcgacccactcttcttctacctccccgccgtcaccgccaccgacagcaacacctgcatcggcttcgaccgcggcctcgccacgggcgccaccgcggtgcgctcggccatcgacctcttctacctcgcccgcatcgcgctccagttccggacggcgtacatcgcgccgtcgtcgcgggtgttcggccgcggcgagctggtgatcgacccggccgccatcgcgcggcgctacgtccgccgcttcttcgtcgtcgacctcctctccgtgctcccgctgccgcagatccccatctggaacttcctccaccgccccaagggcgccgacctcctgcccaccaagaacgccctcctcttcatcgtcctcgtccagtacatcccccgcctcgtccgcttctaccccatcacctccgagctcaagcgcaccaccggcgtcttcgccgagaccgccttcgccggcgccgcctactacctcctcctctacatgctcgccagccacgtacgtccactaatcttctcattcgatttgtaaatttcacataacgtaagtaccttcaagtttcagaaaacaacacacgtttcgatacttggcatttaaccagtgttagaaattccggaatgaaattttcgaaatttcggaccccccgatacgatattatttcggccaaaatttttaatttttttaatttggtaatattttgttcaaatttgaccaacatttgtttaaaattataaaaatttcggtatatcagtaaccaccgatagaataagccaaaacaaaatatatattaagccctgcaattaactacatatgtttttggattaaagcttcacaaaatcaaactatcaacgaattgaacgacgtgcgagatgacgaggttgttccacgtccagcgcacacatcctaaatatatatagataaaaaaaaccacgttatctcgccattgcacatgttcgttgatagtgtgattttgtaaacatcagtaacaaaatatatgtaggtaagtgttaaaatatgtatggttttctatattgaaccaatttacttgtgatataacaattgatactacaatttcgattagatggtgggggcgttctggtacctgctatcgatcgagaggctggacgactgctggagggagaactgcagggtgctcaagttccatcagtgcaagaagtacatgtactgcggaggagggaacctggggcagtcgggtttcctggagtggaggacgatgatccggcaggtgctggtgatggagtgcgcgccggcggacgaggccgggaccgggttccagtacgggatcttcacgacggcgatccagtcgggcgtggtgtcgacgacgaacctggtcgccaaggtgctcttctgcctctggtgggggctccagaacctgagcaccgtggggcaggggctgaagacgacgcactacaagggggaggccctgttcgccatcttcctcgccgtgttcggcctcatcctcatggcgctcctcatcggcaacatgcagacgtacctgcagtcgatgacgctgcggcttgaggagatgcggctgcggcgccgcgactcggagcagtggatgcgccaccgcgtgctccccgtcgacctccaggtatgcaagtgggttattttagcccgctaattatctcacttctagtatattttttcttctatactacattcgtcccatattatttgtcgtttttgacttataatgtttgaccatttattttatttgaaaaattagtgtaaatataaaaaagataagtcataattaaagtacatttgataataaaacaagtcacaaataaaataaataataattccaaatttttttgaataagacgaatgatcaaatattacaaataaaaactcaaaacgacaagtaatatgggacggaggtagtattttgtactaccatgtgaaaaatgaaatagcaaatggtcaaacattataagtcaaaaacgacaaataatataaaaaagataagtcataattaaagtacatttgataataaaacaagtcataaataaaataaataataattctaaatttttttaataagacaaatgatcaaacattacaaataaaaacttaaaacgacaagtaatatgggacggaggtagtattttgtactaccatgtgaaaaatgaacggttttgctaaatttatatcgacacatatttgccctggttacagtcgattttcgagccgcttgattctctgtgagatccgtataggagcagcgtaaatacgaaccgattctgctggaacactggcaattaaaaccaacgaccctagccaactagtcacctgtgtttttctgtttgcaattatatatttattcaaatttatacggtgcttacacaccacttatatatataattggtatgtaattttagaatttacatatgtaactttaagatttacatatgtaattttgagacttacattataaatacactaaaattacatatgtaatttagagacttttaatgtaaatacatgccgactattttttagtgaaaaatatggcgccataaatatagctactcccatgatgaaatagtaagcggatttttataccggtagccgaactacccacttgcatccctacctccaggagcgcgtgtggcggcacgaccagtaccggtggctggagacgcggggcgtggacgaggacagcctcgtgcgcagcctccccaaggacctgcggcgggacgtgaagcggcacctctgcctccgcctcgtccgccgcgtgccgctgttcgccaacatggacgagcgcctcctcgacgccatctgcgagcgcctcaagcccagcctgtgcacggaggccacctacatcctccgggaaggggaccccgtggacgagatgctgttcatcatccgcgggaggctggagagctccaccacggacggcgggaggatggggttcttcaaccggggcctcctcaaggaaggggacttctgcggggaggagctcctgacgtgggcgctcgaccccaaggccgccgccaacctgccgctgtcgacgcgcaccgtcaaggccatctccgaggtggaggcgttcgcgctccacgccgacgagctcaagttcgtcgccgggcagttcaggcggctgcacagcaagcagctgcagcagacgttccggttctactcgcagcagtggcgcacctgggcgtcctgcttcatccaggccgcctggaggaggcacctcaagcgcagggccgccgagcagcgccgccgcgaggaggaggaggaggaggaggccgcgtcggcgtcgtcgtcctgccagatcaccaccaccgtcctcgtatcgcgcttcgccaagaacgccatgcgcggcgcgcagcggcaacggtcgcgccgggacgccaacctcatcgtcctgcccaaaccgccggagcctgacttccagaccatggagtactgattggtagtgtcgaattatacacaacatgcaaatcttgatggagaggaaaccaattatacttttgtcagtctggctgtaccgctggggggatttgcaattataacactgctgcagcaaatttcttatttactttacatgttgaggtaccaccacccctggccaggagattatcatacaatccgtgcagaatactggacagattcaagcagtggcacatgaacaaaatgcaagacgatcatcacaaattcacaagtagttcatccgattgggtaggttgatgccagctcgcgctagaaggtcccttgctattttttcagctgaagcaattacctcctcctggaatagaccacaggaaaagtaaaaaacagagccacagaggccagagtgtgagagacacaatcagttttcagtgcattataggtacttaagcagggtgtaaaattattggttggtgaaccagacaattatataccaaagcctatttttagcatatggtcagctaggggtaggactgttggagtaccgtttctactttctaaccattagaaatctgaacttcagaagtgtttattcctcatgaatgttttgacattacctgttctagtttaaccagttcgtgaattgttggcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0468500, RefSeq:Os12g0468500