Os12g0471100

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0471100| Description = Similar to ATPase 2| Version = NM_001073284.1 GI:115488529 GeneID:4352198| Length = 1829 bp| Definition = Oryza sat...")
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Gene Name

Os12g0471100

Description

Similar to ATPase 2

Version

NM_001073284.1 GI:115488529 GeneID:4352198

Length

1829 bp

Definition

Oryza sativa Japonica Group Os12g0471100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17053748..17055576

Sequence Coding Region

17053864..17055450

Expression

GEO Profiles:Os12g0471100

Genome Context

<gbrowseImage1> name=NC_008405:17053748..17055576 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:17053748..17055576 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatctgtggagacgtgggtagggttcgggtcggccctggccggcgtcggcttgctttggtcgaggatgccggagcacgtccatgacgaggctaggtacatcatcagtagcctggtccccatggcgatatcctacttcaacccctacgagcagatcaccgtgtccgagtacggcgaggagcggttccgacgcaacaagatgtttgacgccgtctccacctacctgagccgcgtgtgcgccggtggcgcctgcaagctcaaggccgagctctgcaacaacggcagggacgacccaattgtcactctggacgagaatcaggaggtcgtcgacagcttcgacggcgcacgcatgtggtggaggctgtgccccaaggcctccaagaacaagggggccatcaccgtcacctactaccccggggaagcggacaagccgcgctgcttcaagctagtgtttcacaaacgccaccgccagctcgtgctcaactcctacctaccaagcgtcgtccggcgttggcgcgagctaaccgcgatgaaccggcagagacggctgttcaccaaccatgccaatgaggcgaagaagagcgtgtggaccagtgtcccttacaacccccctgcaacgttcgacatgctcgccatggaccacgccaagaaggttgagatcgtggacgatctcacaacgttccagaaggggaaggagtaccactcaaaggttggcaaggcgtggaagcggggctaccttctgcatgggccaccgggcacgggcaagtccaccatgattggggccatggccaacttcctcgactacgacgtctacgacctcgacctaacttccgtcaagaacaacagcgagctgcggaagctattccttgatacgacggacaagtccatcatcgttatagaggacattgacgcgatcgaggtcgaactcactaccaagcgcaagggcaagaaggcagccaacggcgacgaaatccacgacaagcgtatgctgatagagttttccgacaagaacgatgaaaaaagcaaagtgactctgtcgggcctgctcagcttcgtcgacgggctgtggtcggcgtgcggcagtgagcggatcttcatgttcacgacgaaccacattgaccggcttgacccagcactaatccggccagggaggatggacaagcacatcgaaatgtcttactgccgcttcgaggccttcaaggtactcgccaagagctacttggacatcaccgagcactcactattcgctgaaatcgagcggctgctcgacgacactgacacaactccggcagacgtcgccaataacctcatgctgaggagcaagaggaacggtgaaatcagtcgactgctcgacgagatcgatggggcaccgcgggcagatgtggccaaatggtgcaagaggaagagagacacggacgagtgcctggcaggtttcgtagaaatactaaagaaatccaagatggaatctgcaacaactccaatggattcaatggaagaagccaaagaggaacgacctaacgcaaaagaaagctacaaaatggggcggatatatgatgagaactataggttgggaaatgccagctag</cdnaseq>

Protein Sequence

<aaseq>MASVETWVGFGSALAGVGLLWSRMPEHVHDEARYIISSLVPMAI SYFNPYEQITVSEYGEERFRRNKMFDAVSTYLSRVCAGGACKLKAELCNNGRDDPIVT LDENQEVVDSFDGARMWWRLCPKASKNKGAITVTYYPGEADKPRCFKLVFHKRHRQLV LNSYLPSVVRRWRELTAMNRQRRLFTNHANEAKKSVWTSVPYNPPATFDMLAMDHAKK VEIVDDLTTFQKGKEYHSKVGKAWKRGYLLHGPPGTGKSTMIGAMANFLDYDVYDLDL TSVKNNSELRKLFLDTTDKSIIVIEDIDAIEVELTTKRKGKKAANGDEIHDKRMLIEF SDKNDEKSKVTLSGLLSFVDGLWSACGSERIFMFTTNHIDRLDPALIRPGRMDKHIEM SYCRFEAFKVLAKSYLDITEHSLFAEIERLLDDTDTTPADVANNLMLRSKRNGEISRL LDEIDGAPRADVAKWCKRKRDTDECLAGFVEILKKSKMESATTPMDSMEEAKEERPNA KESYKMGRIYDENYRLGNAS</aaseq>

Gene Sequence

<dnaseqindica>117..1703#aacggtaaacaagcacacatccacacacaagcacacatccacacaacggcaattaatcattgcagagagctagcagctaggttagttaggtgagcagtggctgcaaggggcaagccatggcatctgtggagacgtgggtagggttcgggtcggccctggccggcgtcggcttgctttggtcgaggatgccggagcacgtccatgacgaggctaggtacatcatcagtagcctggtccccatggcgatatcctacttcaacccctacgagcagatcaccgtgtccgagtacggcgaggagcggttccgacgcaacaagatgtttgacgccgtctccacctacctgagccgcgtgtgcgccggtggcgcctgcaagctcaaggccgagctctgcaacaacggcagggacgacccaattgtcactctggacgagaatcaggaggtcgtcgacagcttcgacggcgcacgcatgtggtggaggctgtgccccaaggcctccaagaacaagggggccatcaccgtcacctactaccccggggaagcggacaagccgcgctgcttcaagctagtgtttcacaaacgccaccgccagctcgtgctcaactcctacctaccaagcgtcgtccggcgttggcgcgagctaaccgcgatgaaccggcagagacggctgttcaccaaccatgccaatgaggcgaagaagagcgtgtggaccagtgtcccttacaacccccctgcaacgttcgacatgctcgccatggaccacgccaagaaggttgagatcgtggacgatctcacaacgttccagaaggggaaggagtaccactcaaaggttggcaaggcgtggaagcggggctaccttctgcatgggccaccgggcacgggcaagtccaccatgattggggccatggccaacttcctcgactacgacgtctacgacctcgacctaacttccgtcaagaacaacagcgagctgcggaagctattccttgatacgacggacaagtccatcatcgttatagaggacattgacgcgatcgaggtcgaactcactaccaagcgcaagggcaagaaggcagccaacggcgacgaaatccacgacaagcgtatgctgatagagttttccgacaagaacgatgaaaaaagcaaagtgactctgtcgggcctgctcagcttcgtcgacgggctgtggtcggcgtgcggcagtgagcggatcttcatgttcacgacgaaccacattgaccggcttgacccagcactaatccggccagggaggatggacaagcacatcgaaatgtcttactgccgcttcgaggccttcaaggtactcgccaagagctacttggacatcaccgagcactcactattcgctgaaatcgagcggctgctcgacgacactgacacaactccggcagacgtcgccaataacctcatgctgaggagcaagaggaacggtgaaatcagtcgactgctcgacgagatcgatggggcaccgcgggcagatgtggccaaatggtgcaagaggaagagagacacggacgagtgcctggcaggtttcgtagaaatactaaagaaatccaagatggaatctgcaacaactccaatggattcaatggaagaagccaaagaggaacgacctaacgcaaaagaaagctacaaaatggggcggatatatgatgagaactataggttgggaaatgccagctagactccttgttttgtgtttgctattttaccagacttgcgtgtttactagtcacttaaggtttcaaagccatacataaaatggaataatataaaattagtggtgtaacactacttattttctcgatct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0471100, RefSeq:Os12g0471100