Os12g0481700

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0481700| Description = Disease resistance protein family protein| Version = NM_001190025.1 GI:297729180 GeneID:9269674| Length = 4575 bp| ...")
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Gene Name

Os12g0481700

Description

Disease resistance protein family protein

Version

NM_001190025.1 GI:297729180 GeneID:9269674

Length

4575 bp

Definition

Oryza sativa Japonica Group Os12g0481700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17880718..17885292

Sequence Coding Region

17880718..17885292

Expression

GEO Profiles:Os12g0481700

Genome Context

<gbrowseImage1> name=NC_008405:17880718..17885292 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:17880718..17885292 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcaccgtcagcgcagcacggtgggtggtgggcagggcgctgggccccgtcaccggcgagctgatggaggcatgggcggcgagcaagaagcttggccccaacatccgcgagctcaagctcctgctcctccatgcgcaggcgatgctcgaaaatgccgagggccgggacatccgtaacggtgcactggatcagctgctgtctcagctccgggacctggcgtacgacgccgacgacgtgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacgaggcggtcgacgacgccgaggaggagaggggccttgtccgtggcctcgccctgcacgctcgccacaccgcgagagccatcgccagaaagctgaagtgcacgtgcagtgccagcgccaggagccacgctgatgcagaagaagggcgatgcctccctgccactgctgtcggtaaactcctcccttgctgctctcccccaactgtgcacaacgatgatgccgctggtgctaagacaaatgaacagcatctccaagcccctaaattgaagtttgttagggttgaaatgtccaaaaaaatgtcagagatagtagagcagcttaagcctgtttgtgacgctgttgacagaattcttgggccactacagccttcaggccactccaaaaatgctaaaacccaatgcattgatttagaaaaacgacctaaaaccaccccaacgattattgagcatgaattatttggaaggaaagaccttaaaaggatcgtggcagatgaaattatgattggcaaataccgtgataatgacattaccgtgcttcccattgttggtccaggtggtatcgggaagacaactttcacacaacacatatatgaagaagtgaagaaccactttcagatctccgtctggatatgtgtttctcaaaatttcaatgcaaatgtattagcaaaggagattgtagaaaaaatgcctaagggaaacaacgaaaaggaaaatgaaagtgaccaagagaaaatcgagaaaagaatacaatcacagcaattcttgcttgtcttggatgatgtgtgggaatatcatgaggatgagtggaaaaccttactagctccatttagaaaaagtggaacaaaaggaaatatggtaatagttacaactcgaaagcaaaagatagcaaaaatggtcgaatcaaccgattgctcaataaaattggaccgcttggatcatgaagattctatgcggttattccaggcatgtgtgtttgataacaacaagacatgggaagattatccatcgggtttacagaaagttggggtagacatagtggacagattgaagggtttccctcttgctataaaaaccgtaggtcggttattaaggaataaacttactttggaccgatggactagagtatatgaaagtaaagaatgggaacttcagcccaatgatgatgatattatgccggtattaaagttaagctataactatcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagattatagattttgtggacaagaattgattaacttgtggattggactggggttacttggcaccgatgatcaaaacaagacaatggagtatttaggactagagtatttagaccaattggttgacaatgggtttttcgaacaggttggaaaagagcatgacagtccttatgtaatgcatgacctgttgcatgagttggcaacaaatatttcgtcacacgaaattcgttgtctaaatagttcaactttgagttctatcaacgaaattcccaaatctatacgtcacatgtctatcatagtagataacagacatgttgagaatagaatcgcctttgaaaatcataagaaagacctgagtacactgggaaacaaattgaaagctgggaacctacgcacaattatgctttttggagaatatcatggatgcttttacaagatttttggtgacgttttgatagatgcaaaatcccttcgggttatttttttgtcaggggcatcctatgatgttggagatgtgttgtgtaacttttcagaacttgtacatcttcggtacttaaggattaaagattctaggatgtgtggagcaagtctacccaatagtatcacaagattttaccacttattggtccttgatttacaagagcactatggtgaattgggttttccaagggacatgggaaaccttctaaaactacgccattttcttgtccatgatgataatattcactctagcatttttgaggtgggaaaactaaattttttacatgagttacggaagtttgaggtcaaaagagaaatgaaaggttttgacttggagcaaattgggcgactactagtactccgtgggtcactgggcatttataaccttgaaaaggttgaagggatcaaggaagcaaatgatgcaaaactagcatatctaaaccatttggatagtttagtattggattgggataatgagcgatgtaatagggatcctatcagagaaggaaatgttcttgaaaatcttaaaccacatgacaacattcgagagctgcacattgcagggcatggaggcgtatcttgcccgaattggctaagtggagacctctccattagaaatttggaatcacttctgataaaatatgtaaattgggacacatttccacttccaggaaagttgtacatgactgagggtcaagagcgtcagggttctgtcacaagccacgactttcataatctgaaaaggttggagctagttaacatacaaaagctgaaaagatggcatggggatggtaccattaatttgctccctcatttgcaaagtttaactataagtgattgccctgaattaacagagttgccactatcagattccacatcctgtcagtttcaacagagcacgatttgttttcctaaactacagaaaatcaagatttcagaatgtccgaaattgttgtcattcccccctataccttggactaattctctgttgtatgtatctattcaaggtgtggattcaggtttggagatgttgaattacagtaaagacgaatcaagtctgtatatcacaggaaaagatgctccaggtagcatgttttggaacatgcttgatttcaataatctaacagaactgcaagagatgaatatcacaaaatgtccccctatatcgttggatcaccttaaaatgctgacatgtctcaagacccttcagataactgattcaggtagcatattgttgccagttgattgtgaaaactatgtccagtacaatcttccagttgagaaactgataatccgttcatgtggtactagagggagggaattgacacatgtgctctctcacttgcccaaactatcaactttgctgatatggaaatgtcagaacgtagcaaggctcggtgtggcggagcagcgaacaataacaactcctgaatcatcactatcaccatcagctaacaaagcagccaagacactaaccacaataccgcagcagcagacaggagaagcggaggagatggaaacagcaacagcagacgatggactacttctcctgcatccccaaataaaggtgtttgaaatcagtgagtgcagagagctaagcctcgacagcggtggaatccaaggtctgctctccctccaaacgttggggatatatgattgccccaagctcctctgctcctcttcctcctcgtattcccctttcccaacctccctgcaaacgctccaactctggaacgtggagggcatggagaccctgccttctcctctcccaaacctcacctttttgtacatttcccattgtggcaatctcagagggggcgaggtcttgtgcaatctccttgcccaaggtaacctcacctctctatatgtccacaaaactcccaatttcttccttggtttagagcactcctgctcccaggtggacaaacaagaagacgtgcatcgttcctggaggttgcaggaactctccacagatgactttgcaagggttcttgctacacctgtttgccatctcctctcttcctccctaaccaaattagaccttcgttggaacgatgaggtggagtgcttcacaaaggagcaagagaaggcccttcacattctcacctccattgaggacctagaattttcgaggtgcaaaaaactgcagtccctccctactgggcttagtgaaatccccaacatcaagacattagggatctatggatgtctagccatcagctcgcttggaaacctccccaattcactgcaacaactagagatttcttcctgtccagccatcagctcgcttggaaacctccccaattcactgcaacgactagggatttcttactgtccagccatcagctcgcttggaaacctccccaattcactgcaacaactagagatttcttcctgtccagccatcagctcgcttgatggcacaaccatccgctcactggccaaagaccgcctaccaactacactccgagaaatagacgtccgttactgtggcaacgaggagctaaaaaggcagtgccgcaagcttcaaggaactatcccaattgtaaaggcctag</cdnaseq>

Protein Sequence

<aaseq>MEFTVSAARWVVGRALGPVTGELMEAWAASKKLGPNIRELKLLL LHAQAMLENAEGRDIRNGALDQLLSQLRDLAYDADDVLDELDYFRIQDELDGTYEAVD DAEEERGLVRGLALHARHTARAIARKLKCTCSASARSHADAEEGRCLPATAVGKLLPC CSPPTVHNDDAAGAKTNEQHLQAPKLKFVRVEMSKKMSEIVEQLKPVCDAVDRILGPL QPSGHSKNAKTQCIDLEKRPKTTPTIIEHELFGRKDLKRIVADEIMIGKYRDNDITVL PIVGPGGIGKTTFTQHIYEEVKNHFQISVWICVSQNFNANVLAKEIVEKMPKGNNEKE NESDQEKIEKRIQSQQFLLVLDDVWEYHEDEWKTLLAPFRKSGTKGNMVIVTTRKQKI AKMVESTDCSIKLDRLDHEDSMRLFQACVFDNNKTWEDYPSGLQKVGVDIVDRLKGFP LAIKTVGRLLRNKLTLDRWTRVYESKEWELQPNDDDIMPVLKLSYNYLPFHLQQCFSY CALFPEDYRFCGQELINLWIGLGLLGTDDQNKTMEYLGLEYLDQLVDNGFFEQVGKEH DSPYVMHDLLHELATNISSHEIRCLNSSTLSSINEIPKSIRHMSIIVDNRHVENRIAF ENHKKDLSTLGNKLKAGNLRTIMLFGEYHGCFYKIFGDVLIDAKSLRVIFLSGASYDV GDVLCNFSELVHLRYLRIKDSRMCGASLPNSITRFYHLLVLDLQEHYGELGFPRDMGN LLKLRHFLVHDDNIHSSIFEVGKLNFLHELRKFEVKREMKGFDLEQIGRLLVLRGSLG IYNLEKVEGIKEANDAKLAYLNHLDSLVLDWDNERCNRDPIREGNVLENLKPHDNIRE LHIAGHGGVSCPNWLSGDLSIRNLESLLIKYVNWDTFPLPGKLYMTEGQERQGSVTSH DFHNLKRLELVNIQKLKRWHGDGTINLLPHLQSLTISDCPELTELPLSDSTSCQFQQS TICFPKLQKIKISECPKLLSFPPIPWTNSLLYVSIQGVDSGLEMLNYSKDESSLYITG KDAPGSMFWNMLDFNNLTELQEMNITKCPPISLDHLKMLTCLKTLQITDSGSILLPVD CENYVQYNLPVEKLIIRSCGTRGRELTHVLSHLPKLSTLLIWKCQNVARLGVAEQRTI TTPESSLSPSANKAAKTLTTIPQQQTGEAEEMETATADDGLLLLHPQIKVFEISECRE LSLDSGGIQGLLSLQTLGIYDCPKLLCSSSSSYSPFPTSLQTLQLWNVEGMETLPSPL PNLTFLYISHCGNLRGGEVLCNLLAQGNLTSLYVHKTPNFFLGLEHSCSQVDKQEDVH RSWRLQELSTDDFARVLATPVCHLLSSSLTKLDLRWNDEVECFTKEQEKALHILTSIE DLEFSRCKKLQSLPTGLSEIPNIKTLGIYGCLAISSLGNLPNSLQQLEISSCPAISSL GNLPNSLQRLGISYCPAISSLGNLPNSLQQLEISSCPAISSLDGTTIRSLAKDRLPTT LREIDVRYCGNEELKRQCRKLQGTIPIVKA</aaseq>

Gene Sequence

<dnaseqindica>1..4575#atggagttcaccgtcagcgcagcacggtgggtggtgggcagggcgctgggccccgtcaccggcgagctgatggaggcatgggcggcgagcaagaagcttggccccaacatccgcgagctcaagctcctgctcctccatgcgcaggcgatgctcgaaaatgccgagggccgggacatccgtaacggtgcactggatcagctgctgtctcagctccgggacctggcgtacgacgccgacgacgtgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacgaggcggtcgacgacgccgaggaggagaggggccttgtccgtggcctcgccctgcacgctcgccacaccgcgagagccatcgccagaaagctgaagtgcacgtgcagtgccagcgccaggagccacgctgatgcagaagaagggcgatgcctccctgccactgctgtcggtaaactcctcccttgctgctctcccccaactgtgcacaacgatgatgccgctggtgctaagacaaatgaacagcatctccaagcccctaaattgaagtttgttagggttgaaatgtccaaaaaaatgtcagagatagtagagcagcttaagcctgtttgtgacgctgttgacagaattcttgggccactacagccttcaggccactccaaaaatgctaaaacccaatgcattgatttagaaaaacgacctaaaaccaccccaacgattattgagcatgaattatttggaaggaaagaccttaaaaggatcgtggcagatgaaattatgattggcaaataccgtgataatgacattaccgtgcttcccattgttggtccaggtggtatcgggaagacaactttcacacaacacatatatgaagaagtgaagaaccactttcagatctccgtctggatatgtgtttctcaaaatttcaatgcaaatgtattagcaaaggagattgtagaaaaaatgcctaagggaaacaacgaaaaggaaaatgaaagtgaccaagagaaaatcgagaaaagaatacaatcacagcaattcttgcttgtcttggatgatgtgtgggaatatcatgaggatgagtggaaaaccttactagctccatttagaaaaagtggaacaaaaggaaatatggtaatagttacaactcgaaagcaaaagatagcaaaaatggtcgaatcaaccgattgctcaataaaattggaccgcttggatcatgaagattctatgcggttattccaggcatgtgtgtttgataacaacaagacatgggaagattatccatcgggtttacagaaagttggggtagacatagtggacagattgaagggtttccctcttgctataaaaaccgtaggtcggttattaaggaataaacttactttggaccgatggactagagtatatgaaagtaaagaatgggaacttcagcccaatgatgatgatattatgccggtattaaagttaagctataactatcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagattatagattttgtggacaagaattgattaacttgtggattggactggggttacttggcaccgatgatcaaaacaagacaatggagtatttaggactagagtatttagaccaattggttgacaatgggtttttcgaacaggttggaaaagagcatgacagtccttatgtaatgcatgacctgttgcatgagttggcaacaaatatttcgtcacacgaaattcgttgtctaaatagttcaactttgagttctatcaacgaaattcccaaatctatacgtcacatgtctatcatagtagataacagacatgttgagaatagaatcgcctttgaaaatcataagaaagacctgagtacactgggaaacaaattgaaagctgggaacctacgcacaattatgctttttggagaatatcatggatgcttttacaagatttttggtgacgttttgatagatgcaaaatcccttcgggttatttttttgtcaggggcatcctatgatgttggagatgtgttgtgtaacttttcagaacttgtacatcttcggtacttaaggattaaagattctaggatgtgtggagcaagtctacccaatagtatcacaagattttaccacttattggtccttgatttacaagagcactatggtgaattgggttttccaagggacatgggaaaccttctaaaactacgccattttcttgtccatgatgataatattcactctagcatttttgaggtgggaaaactaaattttttacatgagttacggaagtttgaggtcaaaagagaaatgaaaggttttgacttggagcaaattgggcgactactagtactccgtgggtcactgggcatttataaccttgaaaaggttgaagggatcaaggaagcaaatgatgcaaaactagcatatctaaaccatttggatagtttagtattggattgggataatgagcgatgtaatagggatcctatcagagaaggaaatgttcttgaaaatcttaaaccacatgacaacattcgagagctgcacattgcagggcatggaggcgtatcttgcccgaattggctaagtggagacctctccattagaaatttggaatcacttctgataaaatatgtaaattgggacacatttccacttccaggaaagttgtacatgactgagggtcaagagcgtcagggttctgtcacaagccacgactttcataatctgaaaaggttggagctagttaacatacaaaagctgaaaagatggcatggggatggtaccattaatttgctccctcatttgcaaagtttaactataagtgattgccctgaattaacagagttgccactatcagattccacatcctgtcagtttcaacagagcacgatttgttttcctaaactacagaaaatcaagatttcagaatgtccgaaattgttgtcattcccccctataccttggactaattctctgttgtatgtatctattcaaggtgtggattcaggtttggagatgttgaattacagtaaagacgaatcaagtctgtatatcacaggaaaagatgctccaggtagcatgttttggaacatgcttgatttcaataatctaacagaactgcaagagatgaatatcacaaaatgtccccctatatcgttggatcaccttaaaatgctgacatgtctcaagacccttcagataactgattcaggtagcatattgttgccagttgattgtgaaaactatgtccagtacaatcttccagttgagaaactgataatccgttcatgtggtactagagggagggaattgacacatgtgctctctcacttgcccaaactatcaactttgctgatatggaaatgtcagaacgtagcaaggctcggtgtggcggagcagcgaacaataacaactcctgaatcatcactatcaccatcagctaacaaagcagccaagacactaaccacaataccgcagcagcagacaggagaagcggaggagatggaaacagcaacagcagacgatggactacttctcctgcatccccaaataaaggtgtttgaaatcagtgagtgcagagagctaagcctcgacagcggtggaatccaaggtctgctctccctccaaacgttggggatatatgattgccccaagctcctctgctcctcttcctcctcgtattcccctttcccaacctccctgcaaacgctccaactctggaacgtggagggcatggagaccctgccttctcctctcccaaacctcacctttttgtacatttcccattgtggcaatctcagagggggcgaggtcttgtgcaatctccttgcccaaggtaacctcacctctctatatgtccacaaaactcccaatttcttccttggtttagagcactcctgctcccaggtggacaaacaagaagacgtgcatcgttcctggaggttgcaggaactctccacagatgactttgcaagggttcttgctacacctgtttgccatctcctctcttcctccctaaccaaattagaccttcgttggaacgatgaggtggagtgcttcacaaaggagcaagagaaggcccttcacattctcacctccattgaggacctagaattttcgaggtgcaaaaaactgcagtccctccctactgggcttagtgaaatccccaacatcaagacattagggatctatggatgtctagccatcagctcgcttggaaacctccccaattcactgcaacaactagagatttcttcctgtccagccatcagctcgcttggaaacctccccaattcactgcaacgactagggatttcttactgtccagccatcagctcgcttggaaacctccccaattcactgcaacaactagagatttcttcctgtccagccatcagctcgcttgatggcacaaccatccgctcactggccaaagaccgcctaccaactacactccgagaaatagacgtccgttactgtggcaacgaggagctaaaaaggcagtgccgcaagcttcaaggaactatcccaattgtaaaggcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0481700, RefSeq:Os12g0481700