Os12g0484600

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0484600| Description = Nodulin-like domain containing protein| Version = NM_001073309.2 GI:297613176 GeneID:4352225| Length = 2066 bp| Def...")
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Gene Name

Os12g0484600

Description

Nodulin-like domain containing protein

Version

NM_001073309.2 GI:297613176 GeneID:4352225

Length

2066 bp

Definition

Oryza sativa Japonica Group Os12g0484600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18045659..18047724

Sequence Coding Region

18045739..18047538

Expression

GEO Profiles:Os12g0484600

Genome Context

<gbrowseImage1> name=NC_008405:18045659..18047724 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18045659..18047724 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggccggcggcgagccgacgctgatgccggtgtcggcgatgtgcacgccggcgttcgtggcgcgggtggtgcggagccggtggttcgtggtgttcgcgtcgatggtggtgatggcggcgtcggggtccacctacatcttcgcgctctactccaaggagctccgctccacgctgggctacaaccagcagacgctcaacaccctcagcttcttcaaggacctcggcaccaacgtcggcgtcgtctccggcctcgtccagcaggtggcccccacctgggcggtgctcctcatcggcgccgccatgaacctcgccggttacctcatggtctacctcgccctggaccgccgcacggcggcgccgccggtgtggctcatgtgcgtgtacatctgcgttggcgccaacgcgctcaccttctccaacaccggcgcgctcgtctcctgcgtcaagaacttcccggagagccgcggcatcgtcatcggcttgctcaagggcttcgtggggctcagcggcgccatctacacgcagctctacctcgccatctatggcgacgacgccaagtcgctggtgctgctcatcgcgtggctccccgccgccgtgtacatcttcttcgtgcacaccatccgcgtgctgccgtaccggcggcggggcgacggcgaggagctcgacagcaagcccttcttctgcttcctctacatctccatcgcgctcgccgcctacctgctcgtcatgatcgtcgtgcagaagcaggtccgcggcttctcccacgcggcgtacgtcgtcggcgccgccgcgctcctcctcatcctcttcctcccgctcgccgtcgtcgtcaaggaggagcgcaagaacgcgtcccacctcgagcgcgccctccagcagccgccgtcgatcgccgtcgagcaccccacgcccacgaaagaagccgacggcgagccggcgacgtcgtgcgtggggaggatgttcaggccgccggagttgggggaggactacagcatcatgcaggcgctggtgagcgtggagatggccgtgctgttcgttgtgtcggtgtttggcatcggcgggacgctgacggcgatcgacaacatggcgcagatcgggcagtcgctgggctacccggcgaagagcatcaacacgttcgtgtcgctcatcagcatctggaactacgccggccgcgtcggcgccggctacctgtcggagatgctcctcgcccggtacaggttcccgcggccgctggcgctcaccgccgtgctcctcgcctcctgcgtcggccacctcctcatcgcgttcggcgtcccgggctcgctctacgccgcctccgtcatcatcggcttctgcttcggcgcgcagtggccgctgctgttcgccatcatctccgaggtgttcggcctcaagtactactccacgctcttcaacttcggctccgccgcgagccccatcggcgcctacgtgctcaacgtgcgggtggcggggcggatgtacgacgccgaggcggccaggcagcacggcggcgtcgccgtcgccggcgacaagatctgcaagggggtgatgtgcttcaagcgctccttcctcatcatcaccggcgtcaccttcgccggcgcgctcgtctcgctgctgctcgtgtggaggacgaggagcttctacaagggggatatctacgccaggttcaaggtggcgccggcgacggccgcgacgtcggcggcggcggcggcggaggcgagctcgccggaggtggaggagaagaagggcactgagaagaacaagaaagacggagttcatgaacacgtgtctaactga</cdnaseq>

Protein Sequence

<aaseq>MAMAGGEPTLMPVSAMCTPAFVARVVRSRWFVVFASMVVMAASG STYIFALYSKELRSTLGYNQQTLNTLSFFKDLGTNVGVVSGLVQQVAPTWAVLLIGAA MNLAGYLMVYLALDRRTAAPPVWLMCVYICVGANALTFSNTGALVSCVKNFPESRGIV IGLLKGFVGLSGAIYTQLYLAIYGDDAKSLVLLIAWLPAAVYIFFVHTIRVLPYRRRG DGEELDSKPFFCFLYISIALAAYLLVMIVVQKQVRGFSHAAYVVGAAALLLILFLPLA VVVKEERKNASHLERALQQPPSIAVEHPTPTKEADGEPATSCVGRMFRPPELGEDYSI MQALVSVEMAVLFVVSVFGIGGTLTAIDNMAQIGQSLGYPAKSINTFVSLISIWNYAG RVGAGYLSEMLLARYRFPRPLALTAVLLASCVGHLLIAFGVPGSLYAASVIIGFCFGA QWPLLFAIISEVFGLKYYSTLFNFGSAASPIGAYVLNVRVAGRMYDAEAARQHGGVAV AGDKICKGVMCFKRSFLIITGVTFAGALVSLLLVWRTRSFYKGDIYARFKVAPATAAT SAAAAAEASSPEVEEKKGTEKNKKDGVHEHVSN</aaseq>

Gene Sequence

<dnaseqindica>81..1880#gtctccactatactacctagctagtctacctccattggtgcctagctagctagctaggctaaggagggagagggttcgagatggccatggccggcggcgagccgacgctgatgccggtgtcggcgatgtgcacgccggcgttcgtggcgcgggtggtgcggagccggtggttcgtggtgttcgcgtcgatggtggtgatggcggcgtcggggtccacctacatcttcgcgctctactccaaggagctccgctccacgctgggctacaaccagcagacgctcaacaccctcagcttcttcaaggacctcggcaccaacgtcggcgtcgtctccggcctcgtccagcaggtggcccccacctgggcggtgctcctcatcggcgccgccatgaacctcgccggttacctcatggtctacctcgccctggaccgccgcacggcggcgccgccggtgtggctcatgtgcgtgtacatctgcgttggcgccaacgcgctcaccttctccaacaccggcgcgctcgtctcctgcgtcaagaacttcccggagagccgcggcatcgtcatcggcttgctcaagggcttcgtggggctcagcggcgccatctacacgcagctctacctcgccatctatggcgacgacgccaagtcgctggtgctgctcatcgcgtggctccccgccgccgtgtacatcttcttcgtgcacaccatccgcgtgctgccgtaccggcggcggggcgacggcgaggagctcgacagcaagcccttcttctgcttcctctacatctccatcgcgctcgccgcctacctgctcgtcatgatcgtcgtgcagaagcaggtccgcggcttctcccacgcggcgtacgtcgtcggcgccgccgcgctcctcctcatcctcttcctcccgctcgccgtcgtcgtcaaggaggagcgcaagaacgcgtcccacctcgagcgcgccctccagcagccgccgtcgatcgccgtcgagcaccccacgcccacgaaagaagccgacggcgagccggcgacgtcgtgcgtggggaggatgttcaggccgccggagttgggggaggactacagcatcatgcaggcgctggtgagcgtggagatggccgtgctgttcgttgtgtcggtgtttggcatcggcgggacgctgacggcgatcgacaacatggcgcagatcgggcagtcgctgggctacccggcgaagagcatcaacacgttcgtgtcgctcatcagcatctggaactacgccggccgcgtcggcgccggctacctgtcggagatgctcctcgcccggtacaggttcccgcggccgctggcgctcaccgccgtgctcctcgcctcctgcgtcggccacctcctcatcgcgttcggcgtcccgggctcgctctacgccgcctccgtcatcatcggcttctgcttcggcgcgcagtggccgctgctgttcgccatcatctccgaggtgttcggcctcaagtactactccacgctcttcaacttcggctccgccgcgagccccatcggcgcctacgtgctcaacgtgcgggtggcggggcggatgtacgacgccgaggcggccaggcagcacggcggcgtcgccgtcgccggcgacaagatctgcaagggggtgatgtgcttcaagcgctccttcctcatcatcaccggcgtcaccttcgccggcgcgctcgtctcgctgctgctcgtgtggaggacgaggagcttctacaagggggatatctacgccaggttcaaggtggcgccggcgacggccgcgacgtcggcggcggcggcggcggaggcgagctcgccggaggtggaggagaagaagggcactgagaagaacaagaaagacggagttcatgaacacgtgtctaactgaagatgatggatgactaattaacctatatatttttcagttgttttgaacgataattagtgggaagatgaaacagtttgtgtattattactggtgaatctgtgtacttccgtgttaaaatgtgatgaggtaaattcgcatggctcggatagttttcaaattttcctttgaatttataggttggagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0484600, RefSeq:Os12g0484600