Os12g0485900

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0485900| Description = Disease resistance protein family protein| Version = NM_001073317.2 GI:297613183 GeneID:4352233| Length = 8272 bp| ...")
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Gene Name

Os12g0485900

Description

Disease resistance protein family protein

Version

NM_001073317.2 GI:297613183 GeneID:4352233

Length

8272 bp

Definition

Oryza sativa Japonica Group Os12g0485900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18152227..18160498

Sequence Coding Region

18152227..18152256,18152698..18152949,18153137..18155141,18159693..18160498

Expression

GEO Profiles:Os12g0485900

Genome Context

<gbrowseImage1> name=NC_008405:18152227..18160498 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18152227..18160498 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgcaacaacagctattgtgggtgctaccacgggggtgatgaagcccctcctgtccaagctcaccaagctgctgggcgaagagtatgccaagctcaaaggcgtgcgcaagcagatcaagttcttgatagatgagttgagcaccatgagtgctgcactcgagatgctcgcggattcggaccagcagctcaacccagaaatgagggattggagggacaagctacgcgagctggcctatgacctggaagattgcatcgatgattttatgtctcgtgttgaccatgatggggaaaagatgggcttcaggaaattcttccgtaagttgaagaaactgaaggcgcgccatgagattgccaatgagatcgaagagctcaagatccgtgcgatcgaggcaagcgaaaggcacaagaggtataattttgaccaattagcacacaactctagcacttttggcattgatcctaggctgtcggcgttctatgaggaggttgataaacttgtgggcattgatggtcctaagaagcgtatcattgagctgctagctatggagatgaaagggtctctaaaagtggtctctattgttggttgtggaggtcttggtaagactactcttacaaaccaagtttatgacacaattcgaagccaattttcttgtgcagcttttgtgtcagtttcacaaaggcctgatataaagaagattctaaacgatattgctgaaggagtagggatctcttctcgtactccggttggtaatgatgaaaagaaactcattaatatactccgagagcatctcaagaataaaagataccttgttgtgattgatgatttatgggatgcaaaagcatggaaaactatcgagcttgcattattaaacagtaactgtggcagcagagtaatcacgacaacacgaagcgttgcagtcgcatcatgctgctcttctcaagatggttatatttatgagatgaagcctcttagtttcgatgactccaaatggttatttttgaaaagagcatttggttatgaaaaatcacattatcctcatctggaagatgttctggataagatactaggaaaatgtggtggcctaccattggcaatcattactatatctagcttgttatcatatcagcatgctattgatgaatggcatagggtacttaatgatattggttatggacttgcaagggatccttatgcagagacaatgtcaaatatattatcgctgagtttcttcaatctccctcaccatctaaaaacttgcttcatgtacctaagtgtatttccagaagattataatattgacaaacgacgtttggttagtaaatggattgctgaaggattcattcaggatgaacaagggcgaagtgcatatagaactggtgagttgtattttaatgagctcatcaatagaagcctgattgaacctgttgatgtaaagtatggtcaggcaaaggcatgtcgagttcatgacatcattcttgactacatcaaatgcaaggctactgaagagaactttgtcacctcattaggatctacagtgcctggatgcactacagagtataaggttcggaggctgtcagtcatcaacagcaatgaagaagatgtcaacataccgacaagcctagatctgtctcaagtacgatcacttactatatttggaaatcgcatgcaaacttctgtatttgatttcaagtttcttcgtgtgttggacctagtatatagggacagaatgggtgacctttttgcaaatattgaaaaattgtttcatctgaagtacatgtgtatctcctcatatggagtggattatctcccagaaaaaattggagaactgaaatatttagaaacgctggacataagacaaaccaatgtggagatattgccatcaactatcacaaaccttcaacgactagctcgtctatttatcaatcaggacacgagattttcagatgaaacgactattggacaattgaagagcctggaagagctaaaagaatttgtagtgtctcagtctgaacaagtgacggccctccaggaagtcagtaagctaaccaagctaaggacattaaaattaacactgcagtcaccattgtcacttgatgattaccatagttgtgtgggaacattattgcaatctttatgcaacctttatgatttgtgcatcatggaccaatcttatgaaaattattgtcttacgttggattcatggcacattgcttctccttgtagccttcgtaagcttgtaatcaaactagtactcaccaaggtgccaaattggatgggtgtgcttggaaatattggagtactagttctaggtatcctgtgtatagcaccagatgatattgagatacttggagcaatacccagcttgctttttctcgagctacaaacttacggaggcaccaatggaaggatcatcatccatggaaacaacagattcataagtttgaaatatttctccttggttattcatgcttgtgggactgcattggagtttgaagcaggatcaatgccaaaggttgagcacctcaagcttcagtttcatctgcatgaattggaatgcctgaatggttcttctgactcaggcatccaacacctctctgctctcggcaaggttgaggtcaaaattatatgcaaaccctcttatgtcattgaattgaatggtttgaactatgatctgatggaacaaaagagtgattgcatcgtcagatgtgtagcaagaaccattaaaactgctgttgagacactccccaaccatcccactatcagtttcaaaacatatcatgtcgaggaatgtgaacattttgaaacaaaaattgaagagaagcagacagcgcaagcacagcgggaccgtcatctaggaatcttatgtatggcaccagaagatattgagatccttggagcaatacccagcttggtttttctcaaactagaaactctcggaggcaccaatggaaggatcatcatccatggaaacaacagattcataagtttgaaatatttctccttggctatcggtgcctgtgggactgcactggagtttgaagaaggatcaatgccaaagaaaatgaagacatggacagtgacggagtga</cdnaseq>

Protein Sequence

<aaseq>MVATTAIVGATTGVMKPLLSKLTKLLGEEYAKLKGVRKQIKFLI DELSTMSAALEMLADSDQQLNPEMRDWRDKLRELAYDLEDCIDDFMSRVDHDGEKMGF RKFFRKLKKLKARHEIANEIEELKIRAIEASERHKRYNFDQLAHNSSTFGIDPRLSAF YEEVDKLVGIDGPKKRIIELLAMEMKGSLKVVSIVGCGGLGKTTLTNQVYDTIRSQFS CAAFVSVSQRPDIKKILNDIAEGVGISSRTPVGNDEKKLINILREHLKNKRYLVVIDD LWDAKAWKTIELALLNSNCGSRVITTTRSVAVASCCSSQDGYIYEMKPLSFDDSKWLF LKRAFGYEKSHYPHLEDVLDKILGKCGGLPLAIITISSLLSYQHAIDEWHRVLNDIGY GLARDPYAETMSNILSLSFFNLPHHLKTCFMYLSVFPEDYNIDKRRLVSKWIAEGFIQ DEQGRSAYRTGELYFNELINRSLIEPVDVKYGQAKACRVHDIILDYIKCKATEENFVT SLGSTVPGCTTEYKVRRLSVINSNEEDVNIPTSLDLSQVRSLTIFGNRMQTSVFDFKF LRVLDLVYRDRMGDLFANIEKLFHLKYMCISSYGVDYLPEKIGELKYLETLDIRQTNV EILPSTITNLQRLARLFINQDTRFSDETTIGQLKSLEELKEFVVSQSEQVTALQEVSK LTKLRTLKLTLQSPLSLDDYHSCVGTLLQSLCNLYDLCIMDQSYENYCLTLDSWHIAS PCSLRKLVIKLVLTKVPNWMGVLGNIGVLVLGILCIAPDDIEILGAIPSLLFLELQTY GGTNGRIIIHGNNRFISLKYFSLVIHACGTALEFEAGSMPKVEHLKLQFHLHELECLN GSSDSGIQHLSALGKVEVKIICKPSYVIELNGLNYDLMEQKSDCIVRCVARTIKTAVE TLPNHPTISFKTYHVEECEHFETKIEEKQTAQAQRDRHLGILCMAPEDIEILGAIPSL VFLKLETLGGTNGRIIIHGNNRFISLKYFSLAIGACGTALEFEEGSMPKKMKTWTVTE </aaseq>

Gene Sequence

<dnaseqindica>8243..8272#7550..7801#5358..7362#1..806#atggttgcaacaacagctattgtgggtgctaccacgggggtgatgaagcccctcctgtccaagctcaccaagctgctgggcgaagagtatgccaagctcaaaggcgtgcgcaagcagatcaagttcttgatagatgagttgagcaccatgagtgctgcactcgagatgctcgcggattcggaccagcagctcaacccagaaatgagggattggagggacaagctacgcgagctggcctatgacctggaagattgcatcgatgattttatgtctcgtgttgaccatgatggggaaaagatgggcttcaggaaattcttccgtaagttgaagaaactgaaggcgcgccatgagattgccaatgagatcgaagagctcaagatccgtgcgatcgaggcaagcgaaaggcacaagaggtataattttgaccaattagcacacaactctagcacttttggcattgatcctaggctgtcggcgttctatgaggaggttgataaacttgtgggcattgatggtcctaagaagcgtatcattgagctgctagctatggagatgaaagggtctctaaaagtggtctctattgttggttgtggaggtcttggtaagactactcttacaaaccaagtttatgacacaattcgaagccaattttcttgtgcagcttttgtgtcagtttcacaaaggcctgatataaagaagattctaaacgatattgctgaaggagtagggatctcttctcgtactccggttggtaatgatgaaaagaaactcattaatatactccgagagcatctcaagaataaaaggtaagcctagttatattatcaatgataatatatatgaatgcatgcgacttaatacccaataaaaagatttggtaactgtggaatgaaattacaaatactatttcttgatgcaaatgagatgtgtatatcttaattaggtaaacattaacaattttcttatctataggatattcgcaaacaaattaatggtgttttttaggtttcgaaatggtttaagatctagctttgactactatatctgttactatcgttcttaaatcatagtgaaattacattaggtcatgtttgtttcatcttatagattgtataaaatagcttgcagttatctgaaatttactcttgcatgaaacattagcacgtactccacgtcagccctcagcccactactttggtccagccatacactgtggtgatctgatttggctggaataccgctcagccaatgcacgaatcaaaaccaattctaggttagggaaaacgaccctctcgtgttgcccttagctcttttgaagcttgatgagtgttgactcaagtgcaatgacaaagtatgaggggtgtttcaatcggaccatatctctacagtacagctagggcacagtggtgggcttagcagctgccaacacagaatgccgctacaatgcatgtgctaacttgttcctcgccgtctaccacctctatgacatgtgggcccaatgtgtaagtaacattggggtctgcgtgaacttgcggttttgtgacaattttctccattatcattgcaacaaactgaaatatgtcactaatgttgtaacaatctgataattcagtgactaaatatgcgattctctgaaatttactcttgttacaatgaaggtgggaagcttctttaatttgtttgtttgctcggttactatttagtgattgtggcgatccaagaagtattaaataaatatattaatcctggttaccatctaggtctctgaactattatatttgagtctacaaatttattaatcttgcagacattgtccaaatattggtgatcatcttttgcttgagccatctctctatataatccatcacactcaaactcttccatttcaattctccagttcttgtcataatgatctgatttgttagcattttcttcgctaaccacagttaatattgccaacattttcaattattatcaacttcatggccttcaagaacaaattactaaatctatgtaaaaatcttgtgacagatactttgttgtgattgatgatttatgggatgcgaaagcatggaaaattatcgagcttgcattattaaacaataattgtggcagcagaataatcactacaacacgaagcgttacagttgcatcatgttgttcttctcaagttggttatatttatgagatgaagcctcttagtttcaatgaatccaaatggttatttttgaaaagaacatttgattatgaaaattcacattatcctcatccagaaaatattttggataagatattacgaaaatatggtggcctaccattggcaatcattactatatctagcttgttattagatcagcatgaaattgatgaatggcatagggtacttaatactattggttgtggacttgcaaatgatcctaatgcagagacaatgtcaaatatattatcactgagtttcttcaatctccctcactatctaaaaacttgcttcatgtacctgagtgtatttccagaagatcgtaagattaagaaacggcatttggttagcaaatggattgctgaaggattcattcatagacacataaaggtgcaacttttggaggggcttttaactatttgccactcttacaaatggtgcttaacgatttgccacaaggcccacatgtcatagacacatgagggcccacatatcatagacacggtgtggcaaatcgttaattgccatgtcacaagagtggcaaatagttaaatttcccacttttggaagccgggttttacgcgtaaaaccaactactaagatgcaacttttctctgagacccattccaacttgagaaaacaacagcagcaacaacaacaactcctcctgagaccgcacaacaaaaacgacggaagtcagccccgaccccataggccataggcgctcgatcgtatgctgcctcgatccggcctcgatcgatcggcgcctcagcagcagcagcagcagtagcagcagttggtcggcctcggccaggtggaggaggagctgcaggactggcctctttactcaggcaagaatcctctctttttttatctcctccttccctctctccgcacgattaatcgtcgtgagaattgagattagccagcgttctgctacttctcgagttaacgtcgtcgtccacagcctgatctagcagctcagcacggcagcacctgcttcttgcgcgggtaatcccccctaaggtgaaaaatggtcaataggtgctggttttaaataaattggcacatatgagccggtacagtagtgatgggactgttaatatatatgcatgcgtgggaatgccctatagaaaagtccggtaaccttggaatgaaattacaaaaacttctttatacaaatgagatgtatatatcttaggctatgtgggaggtgaggttgggaactcacctcccgcgcacgcaaaacggagcgacacatttttttttgaaaaatagattaatatgatttttttaaagcaacttttgtatagaaaccttttgcaaaaaaatgcaccgtttagcagtttaaaaagcgtgtgcgcggacgagggaggtgagttgggaaaggtaggggaagaacacagccataattgtgtaaacattaacaattttcctatatataggatattccctccagttgaaaataaacgatgttttgcaatttgaaatgatgtaaaatctagctttaactattatatatgttactatatattatttgcaaaccataatgaaattatattaagtcttgtttgtttcagcttatctctactattataaaaactgaagatgtttctgccataattttggtgcatcatccgtgtttgaatcggttttaattttatgtttcagttaaatcctttcctttttttcttatgccagagtgtccctcttatcagagacgtgcgcgaattaattgggcttgcaccttttcacgcgtctcttgccacaagcagcgatcgggcccacgcttgagtctgtattccacacgcgcctttgcgcgccgcctcgattgggcccgcaatgccctcgcacgtgcaatttttcgcatgcccaattgggcccgtgaagccatcatgcgcacaattttcccttgccgcgtgtccgattgagattgcgtcgtcctcgcccgtgatttaaaaattgaagatgttttttttcaaaactatggtacattatccgtatccgattcctgtcacgcgtaacaattgttgactctcgagcgaattgcgaaagacagtatatgtgatatgaataccaagcgaatgaaactcgcagagtctatgtggatatcacgtacatcgttgctcagatcatccgattctattcgtattacacgatacgattcttgggacatgttagcacgatttcaagtcagtctccacacatgctcgtacgtactaccagggataacgttacaataattcataagaatcagttttactttcaaaaagaacatgccaaatgaaataaagaatgatcgaaattgctgaatccgtccgtcatcaattcttgcctgacttaagataaagctagacaacaaatcgagctcatgtttgaaggcctcattatttggcttatgctttcctgtaagcgaaactttaaattttagaacttaattttaaactcgactttttggttttttatcgtactttattttacatcatttacttctgaatcgctaagaatatgtatataaaagatttgcatacaaatagtcttttgtttggtaataagtgatttggataagcacatgaataaacaaaacgatggtatgtgattatttatgcactgacatatatgtacaaattaaattggctctacccgttgcaaagcacgggcaccttttcttttctagtagattgtaaaaagtaagcttgcagattgcaacaatccacaagctggaaggaagtacattgtttcattgtagcaataatatggcatgtgtgtatcgttacaaccaatgaaggtgggaagctgctttgtctgtttccttagttactatttggtgattgttaccatccaagaagtattaaataaatatattaatcctggctactatctaggtctccaaactattatatttgagtatataaaattattaatcttacactcgttgtgtccaaatattagtaattatcttatgcttgagccatctctctgtccaatccatcgcactcaaatcatcatttttaattttcctgttcttatcataatgatttgatttgttagtattttcgtcttagctaactgtaattaattctgccaacattttcaattattatcaactgcgtggatttcaagaacgaattactaaatatatgtaaatatattgtgacagataccttgttgtgattgatgatttatgggatgcaaaagcatggaaaactatcgagcttgcattattaaacagtaactgtggcagcagagtaatcacgacaacacgaagcgttgcagtcgcatcatgctgctcttctcaagatggttatatttatgagatgaagcctcttagtttcgatgactccaaatggttatttttgaaaagagcatttggttatgaaaaatcacattatcctcatctggaagatgttctggataagatactaggaaaatgtggtggcctaccattggcaatcattactatatctagcttgttatcatatcagcatgctattgatgaatggcatagggtacttaatgatattggttatggacttgcaagggatccttatgcagagacaatgtcaaatatattatcgctgagtttcttcaatctccctcaccatctaaaaacttgcttcatgtacctaagtgtatttccagaagattataatattgacaaacgacgtttggttagtaaatggattgctgaaggattcattcaggatgaacaagggcgaagtgcatatagaactggtgagttgtattttaatgagctcatcaatagaagcctgattgaacctgttgatgtaaagtatggtcaggcaaaggcatgtcgagttcatgacatcattcttgactacatcaaatgcaaggctactgaagagaactttgtcacctcattaggatctacagtgcctggatgcactacagagtataaggttcggaggctgtcagtcatcaacagcaatgaagaagatgtcaacataccgacaagcctagatctgtctcaagtacgatcacttactatatttggaaatcgcatgcaaacttctgtatttgatttcaagtttcttcgtgtgttggacctagtatatagggacagaatgggtgacctttttgcaaatattgaaaaattgtttcatctgaagtacatgtgtatctcctcatatggagtggattatctcccagaaaaaattggagaactgaaatatttagaaacgctggacataagacaaaccaatgtggagatattgccatcaactatcacaaaccttcaacgactagctcgtctatttatcaatcaggacacgagattttcagatgaaacgactattggacaattgaagagcctggaagagctaaaagaatttgtagtgtctcagtctgaacaagtgacggccctccaggaagtcagtaagctaaccaagctaaggacattaaaattaacactgcagtcaccattgtcacttgatgattaccatagttgtgtgggaacattattgcaatctttatgcaacctttatgatttgtgcatcatggaccaatcttatgaaaattattgtcttacgttggattcatggcacattgcttctccttgtagccttcgtaagcttgtaatcaaactagtactcaccaaggtgccaaattggatgggtgtgcttggaaatattggagtactagttctaggtatcctgtgtatagcaccagatgatattgagatacttggagcaatacccagcttgctttttctcgagctacaaacttacggaggcaccaatggaaggatcatcatccatggaaacaacagattcataagtttgaaatatttctccttggttattcatgcttgtgggactgcattggagtttgaagcaggatcaatgccaaaggttgagcacctcaagcttcagtttcatctgcatgaattggaatgcctgaatggttcttctgactcaggcatccaacacctctctgctctcggcaaggttgaggtcaaaattatatgcaaaccctcttatgtcattgaattgaatggtttgaactatgatctgatggaacaaaagagtgattgcatcgtcagatgtgtagcaagaaccattaaaactgctgttgagacactccccaaccatcccactatcagtttcaaaacatatcatgtcgaggaatgtgaacattttgaaacagtaagttctccctcagaattgcaggcattaatattgttcactgtatcgcatatgcttgaccatccaaataaacaatttcgatgttattctgatgcacacttttatgtgccttgctttttttgacttctgttctagcgtatcaacaagaaagtaaaggcatgttctgactgagtgaccccaaaatcagaaaattgaagagaagcagacagcgcaagcacagcgggaccgtcatctaggaatcttatgtatggcaccagaagatattgagatccttggagcaatacccagcttggtttttctcaaactagaaactctcggaggcaccaatggaaggatcatcatccatggaaacaacagattcataagtttgaaatatttctccttggctatcggtgcctgtgggactgcactggagtttgaagaaggatcaatgccaaaggttgagcacctcaagcttgattttcgtctgcacgaattggaatgcctgaatggtgcttctgacttaggcatccaacacctctctgctctatgcaaggttgaggtcgaaattaattgcaattgcttcaagcacacgtccaatttcttcgatgactttgaattgaaatgtttgaactatgatctgatggaagaaacgagtgattgcatcgtcagatgtgttgcaataaccattaaatctgccgttgatacactccccaaccatccaactatcagtttccaaataaacatttcgaattggtaagttctccatcagaatggccggcattaatattgttcactttatcgcttatgcttgatcatcgaaatgaacaatttctaacttattctgatgcgcacttttatacacatttccttttccacttctctgttctattttatctagaaaatgaagacatggacagtgacggagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0485900, RefSeq:Os12g0485900