Os12g0492900

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0492900| Description = Cyclin-like F-box domain containing protein| Version = NM_001073334.1 GI:115488629 GeneID:4352251| Length = 3513 bp|...")
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Gene Name

Os12g0492900

Description

Cyclin-like F-box domain containing protein

Version

NM_001073334.1 GI:115488629 GeneID:4352251

Length

3513 bp

Definition

Oryza sativa Japonica Group Os12g0492900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18721718..18725230

Sequence Coding Region

18722694..18723596,18724738..18725106

Expression

GEO Profiles:Os12g0492900

Genome Context

<gbrowseImage1> name=NC_008405:18721718..18725230 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18721718..18725230 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgtcgacgacgacaggtgggaggacctcccgacggacctcctcacggagatcctgctgtgcctcccgccgatcagcggccggcggcgcgtccgcctcgtgtgcagccgctggcgcgacgccgtcgacgagctcgaaccggagacgacgcacagccgcgccaagccgctcaccttcttgaagcgatccgtcgacagtggccgcccggccaccgcgcgcgtgttcgacgacctcgccggcggtgggctcggcggcagcagggagatctggaacggcggcggcggcggcgacggcgtgtccggtagttccccggacatcgtcggcacgtgcaacggccttctctgcctgtggcactgtggtagcgacagcggcggcgagataacgctggtcaacccggtcaccggcgagagcctcgccatcccgccgccgccgccgccgtcgccgcggtggaggagccacacgacggaggggccggaggcagagaggctcagcttcgcgtaccacccgctgacggggaggtacagcatcgtccacttccccgccgccttctgcgacggcggcggcgacaacctcgccgacccggcggtggaagtgctcacgctcggcggcgcgggcgcgtcggcgtcgtggcgggaggtggcggcgccgcccggctcgaggtgctgcctcgctttgggcatcgtcagcgtcgacggcgccacgtactgggtgaccaaggacgggaggatcatgtcgcttgaccatgagcacgaacgcgtcacggccgttctgccgctgccgccggcgatcgccggagaacttgacagttggtggagtacccgcctcacagaggtcgccggaaggttgggtgtcgccatcacctccaaccatacgacgccctccaagtataacgtcgaggtgtgggtgttggatggcgcaagagggaagatgacctggagccatcgttacactatacaagacctgcagtttagttaccaagagattgcatggccacacttcgcctacggagagaatgtcttgacaatcttagacagcgaccatctgcgcaatcagctgtatacgcattggctatggccacacaagaacaggacaagtgtagcaacgggcgacgtggtaaaaggcactttggtggaggagttcgtcatcgacccggaaaatgtgaaaattttatcgctcatcgaccctgaaatacatgtgaacatgttctcgtatgtagagaccaatgagccactgaacatctacaaggaggtgtgcatggatagttaa</cdnaseq>

Protein Sequence

<aaseq>MAAVDDDRWEDLPTDLLTEILLCLPPISGRRRVRLVCSRWRDAV DELEPETTHSRAKPLTFLKRSVDSGRPATARVFDDLAGGGLGGSREIWNGGGGGDGVS GSSPDIVGTCNGLLCLWHCGSDSGGEITLVNPVTGESLAIPPPPPPSPRWRSHTTEGP EAERLSFAYHPLTGRYSIVHFPAAFCDGGGDNLADPAVEVLTLGGAGASASWREVAAP PGSRCCLALGIVSVDGATYWVTKDGRIMSLDHEHERVTAVLPLPPAIAGELDSWWSTR LTEVAGRLGVAITSNHTTPSKYNVEVWVLDGARGKMTWSHRYTIQDLQFSYQEIAWPH FAYGENVLTILDSDHLRNQLYTHWLWPHKNRTSVATGDVVKGTLVEEFVIDPENVKIL SLIDPEIHVNMFSYVETNEPLNIYKEVCMDS</aaseq>

Gene Sequence

<dnaseqindica>977..1879#3021..3389#ggtaattaacaatccaaatcaccatatagagaaattaccgtacagctccaactcctctctccacatgggcaggtcaaagcccataggacatgcctcaatctcttccaggtgagaaacgtgatcgcgtttgcctcccccacgcgaccgatcgcttaatagcaatctcgctctctgtctcctcccccctccatgtgtggcgtcctagtataacgatggttgcaccgtggcctcagatccaacagagcgatgaggagtccaagacccgtgcacgttctgttgtttctcttgatattgattttctctgattgtgttgatgttgattcggtggagattatgaatttttctgattgtgtggatataatgttaatttgatggagattacaattttttctgattgtgtggatgttatttcttaatctatgaaattttctttctaaattgctaggagaaatatggggggcttgaaagcattatttttctcacagaaaggttatagatttcggttgtggaaccagtacctataaatagtctcatctgtgtcgtctactggatgccgattgaaaaatccagcacgtgtagctagctcgcaacctgccccaacacgttttctatagtagtgtcggttgtcgcattccttgtctccttaaggcattgttggttaatcactatgaagcagggattggagaagatttattctagacctattatagtgtggaattattccactcaatcccctctaaaccgaacatgacgtaaagctgatgaaacccatccaacaagtgaaatttcaccgtacgtaccccttccaatgtggccgtttcgtgtagcatccggctattgactcttttattcagaagattactatattaattgtacgagtacataaacaccatcgatctcgtgtacgtacgtaacgtaaatacgtaatatccgtcgttgtcctcgcaccgagctgcactggccgtcgccgccgccgatggccgccgtcgacgacgacaggtgggaggacctcccgacggacctcctcacggagatcctgctgtgcctcccgccgatcagcggccggcggcgcgtccgcctcgtgtgcagccgctggcgcgacgccgtcgacgagctcgaaccggagacgacgcacagccgcgccaagccgctcaccttcttgaagcgatccgtcgacagtggccgcccggccaccgcgcgcgtgttcgacgacctcgccggcggtgggctcggcggcagcagggagatctggaacggcggcggcggcggcgacggcgtgtccggtagttccccggacatcgtcggcacgtgcaacggccttctctgcctgtggcactgtggtagcgacagcggcggcgagataacgctggtcaacccggtcaccggcgagagcctcgccatcccgccgccgccgccgccgtcgccgcggtggaggagccacacgacggaggggccggaggcagagaggctcagcttcgcgtaccacccgctgacggggaggtacagcatcgtccacttccccgccgccttctgcgacggcggcggcgacaacctcgccgacccggcggtggaagtgctcacgctcggcggcgcgggcgcgtcggcgtcgtggcgggaggtggcggcgccgcccggctcgaggtgctgcctcgctttgggcatcgtcagcgtcgacggcgccacgtactgggtgaccaaggacgggaggatcatgtcgcttgaccatgagcacgaacgcgtcacggccgttctgccgctgccgccggcgatcgccggagaacttgacagttggtggagtacccgcctcacagaggtcgccggaaggttgggtgtcgccatcacctccaaccatacgacgccctccaagtataacgtcgaggtacgctctaataacccttaagaagtacgctccccgtgtttctgtttcatattgcaagtcagttttgattttttttatggtaaacattttagttggatcaagtttatagaaaattatagctacgttttcaacataaaacaaatatattgtaaaaatgcattcagtgttatatgaagctaatttggtggtttagatattgttaaaaattatataaatttggccacacttaacaaaaatttaactaaaataaattaaagtgatttgtaatataaaaatgagagaaaacagtaaaacaggtcctcctttccatactaaggtttctttccctcacccaagtatggacgaggaaaccgatcatgtcccatccttctataaaaataataggaaaatataaaccacaattatctgctctctctatctcaaagaaaaaaaatcaaaacctgggaataaatcaggacataagattttattttaatatgggatagagggagtacttgagaattttgtaaatgggttttgttctttatcccatgggatggcatgtataatttgctattttctttaaatgagctaaccaatgtcataatagagggagtagctacttgtaagatttttctttttaatagtggataaaatatagcatttcctttaaaaaaaaagctacagccacagcttcttcaaaccattaaattttatcgagctattatccgtctactccctaaatatcttaacctatcacagtcgcctccatttgatttattcacctacccctttatctcaacaaataacaaacatccattgttcaatttatgttgcagcatatttctttgatgagataactatattttgaaatagataaaatataaaactaatgctccatctgttccaaaatatagcaacattgtacggtcgcatgtgatataatccggcttattgctatgaatttggaaaaaaatatgtgtcgatcgtctcagagatattttagggaggaggtagtaattccttttaatttgttccaaacactatatatatatatttatatatatatgtatatatatatatatatgtatatatatatatatatatatgtatatatatatctatctatctatgcgagctatacagatgtgtgtccatacaggtgtgggtgttggatggcgcaagagggaagatgacctggagccatcgttacactatacaagacctgcagtttagttaccaagagattgcatggccacacttcgcctacggagagaatgtcttgacaatcttagacagcgaccatctgcgcaatcagctgtatacgcattggctatggccacacaagaacaggacaagtgtagcaacgggcgacgtggtaaaaggcactttggtggaggagttcgtcatcgacccggaaaatgtgaaaattttatcgctcatcgaccctgaaatacatgtgaacatgttctcgtatgtagagaccaatgagccactgaacatctacaaggaggtgtgcatggatagttaagtttggttagattgctacctttatatatgactttgaatataattggtcaatatatgatttgttgcacatacttaaatatataataggggtattaattatttaaacggttttgccgtgaagtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0492900, RefSeq:Os12g0492900