Os12g0500400

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0500400| Description = Protein kinase domain containing protein| Version = NM_001073349.2 GI:297613202 GeneID:4352269| Length = 3332 bp| D...")
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Gene Name

Os12g0500400

Description

Protein kinase domain containing protein

Version

NM_001073349.2 GI:297613202 GeneID:4352269

Length

3332 bp

Definition

Oryza sativa Japonica Group Os12g0500400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19180353..19183684

Sequence Coding Region

19180353..19180489,19181188..19181353,19182080..19182756,19183239..19183342,19183449..19183684

Expression

GEO Profiles:Os12g0500400

Genome Context

<gbrowseImage1> name=NC_008405:19180353..19183684 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19180353..19183684 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttttccatggccggtgatgcgcagcgatcaaagcagcgagagggcggcggcaggagcgaaacggagcaaccccgaatcacttctggtcgtcacagccgatatcagcgccacccccttgtcgttcccctcctcgccgtcgccggtgacctcctccaccggcggcggggtggagtcgtcggcgctgccgctgtgggagtacagcggcgacgagctggcggcggcgacggggaggttccacgacatcctctccgaggagaagatgaggctcgtctgccgggacctcagggctcgccgctttctccaggacaggaacgtcgtccgcctccatggttatgggttttgcgtgagatatcggaaactccacctggtgtacgactacatgccccacggcagcctatcccagcacctgttcgccggtgcagggagctcggcggcgatcctgagctgggatcgccgctccaagatcatcgccggcgccgcccggggcctgcaccacttccacagccacggcgccgtccacggctgcgtcacggcctccaacatcctcatcgacaacgacttcaccgcgcgcctcggcgacttcggctactcctggtcccgccgcttccggcgccgctgcaccagccccgccccgacgggcgacatcgtcaggatgagcagcgaaacggacgtcctctgcttcggcgcggtggtcctcgaggtcgtctccggccgccggtccgacctcgacgactccggcggcggcgacggtgatcgtcgtcgtttcaggtccctggtcgagtgggtctgggcgctgcacgaggcaggccgcatcctcgaggcggctgatgcgacccttggcatcgctgccggcgacgatggcggctgcggcggtggccggaggagagatgcggtcgaggccaagaagatgctcctcgtcggacttgcctgcagccaccctgaccccaagcaacggcccaagattagggatgtcgtcgagatccttaaatctgacggtgtgcagccgccgaaggaaggccttggcgacgactggcaggtcggcgatgcagggcgcggcggttgctgctgctgcctcctgcgctctggattgcgcgggtgtgatgctagggatggccggtgcagccgcgatgatgatcgcgatgccagtggcgcggcgaccaatcttataggcgatgatgcgggcgcatgcagtgtcttgggcggcgtcggtgaccaggacggcgaggtcaacgagctggaggaggccgtccgcacgctcgtccctccttgccccgggcgctatcgtggccttcgtagggagcctgctccggcatag</cdnaseq>

Protein Sequence

<aaseq>MGFPWPVMRSDQSSERAAAGAKRSNPESLLVVTADISATPLSFP SSPSPVTSSTGGGVESSALPLWEYSGDELAAATGRFHDILSEEKMRLVCRDLRARRFL QDRNVVRLHGYGFCVRYRKLHLVYDYMPHGSLSQHLFAGAGSSAAILSWDRRSKIIAG AARGLHHFHSHGAVHGCVTASNILIDNDFTARLGDFGYSWSRRFRRRCTSPAPTGDIV RMSSETDVLCFGAVVLEVVSGRRSDLDDSGGGDGDRRRFRSLVEWVWALHEAGRILEA ADATLGIAAGDDGGCGGGRRRDAVEAKKMLLVGLACSHPDPKQRPKIRDVVEILKSDG VQPPKEGLGDDWQVGDAGRGGCCCCLLRSGLRGCDARDGRCSRDDDRDASGAATNLIG DDAGACSVLGGVGDQDGEVNELEEAVRTLVPPCPGRYRGLRREPAPA</aaseq>

Gene Sequence

<dnaseqindica>3196..3332#2332..2497#929..1605#343..446#1..236#atgggttttccatggccggtgatgcgcagcgatcaaagcagcgagagggcggcggcaggagcgaaacggagcaaccccgaatcacttctggtcgtcacagccgatatcagcgccacccccttgtcgttcccctcctcgccgtcgccggtgacctcctccaccggcggcggggtggagtcgtcggcgctgccgctgtgggagtacagcggcgacgagctggcggcggcgacggggaggtacgacggcgcgaggaggaggctggggcagggccagaccggggcggtgttcagggggacgctcctgggggcacgacggcgtcgccgtcgacgtggccgtcaagaggttccacgacatcctctccgaggagaagatgaggctcgtctgccgggacctcagggctcgccgctttctccaggacaggaacgtcgtccgcctccatggttatggtaatcgtgcatccatatgttgatgttcatactcaatcgatctacattatatttcagtttcaaatttattaattgtatactctgtattgtatttatattttgtagaccgctagtgttgtaactcggagatggattttttttctcgtcctctcattttgtgcataacatttaaatagttgtcaacaaaatttataaaatttagcaagatagattaatatgtgataaatcatcccacaaatatctatatacaaattcgacatatttaattagaaaaaataacaaatttgaatacgatttgaacatatatgtttgtagagtgacgtattacatattttactagatattttaaaatcctttagcaatctttcgagtgacatgaaaaacttttaaaattctttagtaatccttcgagtgacatgaaaaacgaggaatatcctatcagaggatgaatagagtttcccttctaaatcatcccattccagggttttgcgtgagatatcggaaactccacctggtgtacgactacatgccccacggcagcctatcccagcacctgttcgccggtgcagggagctcggcggcgatcctgagctgggatcgccgctccaagatcatcgccggcgccgcccggggcctgcaccacttccacagccacggcgccgtccacggctgcgtcacggcctccaacatcctcatcgacaacgacttcaccgcgcgcctcggcgacttcggctactcctggtcccgccgcttccggcgccgctgcaccagccccgccccgacgggcgacatcgtcaggatgagcagcgaaacggacgtcctctgcttcggcgcggtggtcctcgaggtcgtctccggccgccggtccgacctcgacgactccggcggcggcgacggtgatcgtcgtcgtttcaggtccctggtcgagtgggtctgggcgctgcacgaggcaggccgcatcctcgaggcggctgatgcgacccttggcatcgctgccggcgacgatggcggctgcggcggtggccggaggagagatgcggtcgaggccaagaagatgctcctcgtcggacttgcctgcagccaccctgaccccaagcaacggcccaagattagggatgtcgtcgagatccttaaatctgacggtgtgcagccgccgaaggtgccgccgtcgaagccgaaataccaagaacggtgaccaaaatactctctgcatctgcttttcactgtcactaggacagttgttggagttcgaaatcagcccacgtttgtagtaataagtactccctccctctctcattttaagcgcagttatgatttttcaggtataactttgactgtccgccttatttaaaaaatattttaaaaaaattcaaaaatataagtcacttataaagtattatttatgttttatcgtcttataataataataatactaattataaaattttttcaaataagatggacgagcaaaattggaaacgaaaactttacacttaaaatgggataggtggagtatatttttacctccctcaactcttacccccgattaaatcacctccctcaaccacaatattaagtacggataatgcaaatcgattctctcggctgtttaaataatggtttcgtccgcttgtagcaccacatatctgtgtgaaaattttttttaaaaaaaaaacaatagctccacatgtcggtcacggccagaatgaccgggtatgacaccccacgccgtcctgcttgcatgtagccccgcacgatctttgactagccgacacccgtgacgagcaacaggaaccgggacgcaccggcagggacctcgtcgccgaagaggtcgatcgatggtgatttgccctgctgccgactcgccgccgatggacacgtccaggaaggccttggcgacgactggcaggtcggcgatgcagggcgcggcggttgctgctgctgcctcctgcgctctggattgcgcgggtgtgatgctagggatggccggtgcagccgcgatgatgatcgcgatgccagtggcgcggcgaccaatcttataggcgatgatggtacgtaatgatgagtgtgtggctgaggtggtgcaggcatgcagcgtgggcttggagcggaggatggattctaatctctcgggtggatgtccacccgtttcttgcatgccacttagatgattatgaaaaaattccaaaagaatttacaatataggttaatatgtaatatatcacttcacatacatgcaagttcaaattcaacttctacaagttgtaacaaaaataacaaatcaaactctaacaagttttacagttaaatttgttatttttgttacaacttatagaagtcgaatttgaaattgtatgtttgtgacgtgatatattacatattaatctatcatgtcaattttttttaaaaaaattcataaccatttagataacatgcaagaaactggtggacgttcatccgagtgtttaaaacagtttccgcttggagcgcgacattgctggcgagacgagaggtgagtgactgatgacagcggaattgcatcgcaaggatcgatggtgtgaccgcgtgagcagtactcttcttgccacctctcgccggcgtcgacaccttctcgtaggccttctcttatcgagggcactcctccttcttgctcgaggcactcctagcggcgcaggagcacgggacgtgtgccgccggatcgcgataccaccggatttgcctcccacaccctcgtcatgcacaaatccagcgggcgcatgcagtgtcttgggcggcgtcggtgaccaggacggcgaggtcaacgagctggaggaggccgtccgcacgctcgtccctccttgccccgggcgctatcgtggccttcgtagggagcctgctccggcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0500400, RefSeq:Os12g0500400