Os12g0502500

From RiceWiki
Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0502500| Description = Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain containing protein| Version = NM_001073362.2 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0502500

Description

Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain containing protein

Version

NM_001073362.2 GI:297613208 GeneID:4352282

Length

4778 bp

Definition

Oryza sativa Japonica Group Os12g0502500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19295921..19300698

Sequence Coding Region

19295925..19296135,19297051..19297189,19297906..19298034,19298450..19298508,19299182..19299294
,19299436..19299528,19299675..19299777,19300098..19300180,19300272..19300313

Expression

GEO Profiles:Os12g0502500

Genome Context

<gbrowseImage1> name=NC_008405:19295921..19300698 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19295921..19300698 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccttggcctccctcgccgccgccgcatcgctcctccccgccgccgcggcgaggtcacgcgtgtcgctcgcccgctgccgcgggatggcctcctcgtcgtcaccatctgcggccgcgggggcatcggcggcggcgagggtgggcgtggtgcagatgacctccgtgggggacctcgacgccaactacgccacctgctcccgcctcgccaaggaagcagcatcctctggtgtcaaatttctttgctttcctgaggtattctcattcataggctccaaggatggcgagtctattaagattgctgaaccattagatggcccaataatgcagagatattgctcacttgcaaaggaatcaagtatgtggttgtctcttggagggtttcaagaaaagggtcctgatgattcacaccagtacaatactcatgtactaattgatgattctggagaaattaggagctcatatcggaaaatacatctgtttgatgtagatgtaccaggcaatatggtgtacaaggaaagtcgttttacgacagcaggtgatactgtcgttgcagtggatagtccttttggacgacttgggcttactgtttgctatgatttgagatttccagagctttaccaatgtttgcgctttaagcatcaagctcaggtcttactagtaccatccgcgttcacaaaagtaactggggaggcgcactgggaaattcttctccgagctcgtgccattgagacacaatgctatgttattgcagcagctcaagctggaaaacacaatgagaaaagagagagctatggtgattctataattattgacccatggggaacagttatagctcgacttccagaccggctgtccactgggtttgctgtcgcagatgtagacttgtcaaaagttgaggctgtgcgaactaaaatgccaatctctgagcaccggaagtttgacagcgtctggaaaacctcatcactgtaa</cdnaseq>

Protein Sequence

<aaseq>MALASLAAAASLLPAAAARSRVSLARCRGMASSSSPSAAAGASA AARVGVVQMTSVGDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGSKDGESIKIAE PLDGPIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLIDDSGEIRSSYRKIHL FDVDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPELYQCLRFKHQAQV LLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDSIIIDPWGT VIARLPDRLSTGFAVADVDLSKVEAVRTKMPISEHRKFDSVWKTSSL</aaseq>

Gene Sequence

<dnaseqindica>5..215#1131..1269#1986..2114#2530..2588#3262..3374#3516..3608#3755..3857#4178..4260#4352..4393#gcatatggccttggcctccctcgccgccgccgcatcgctcctccccgccgccgcggcgaggtcacgcgtgtcgctcgcccgctgccgcgggatggcctcctcgtcgtcaccatctgcggccgcgggggcatcggcggcggcgagggtgggcgtggtgcagatgacctccgtgggggacctcgacgccaactacgccacctgctcccgcctcgccaaggcaagcgcacctcttcaactggtcgccgtgtatatttcctcaactgcggcgagcctgcttgctctgctctgctgctgttgttagtggggttttggtggggaaatcctcgcaaaaaaaaaaaaaaaagaagaagctgcaattgatatgccatatgctcttgttttgtggataaacgttaagcaatgtgatggttcatcggtgtagaatggatggatccgagtgggagctaagctttgctgcctttgtaacaactgtattgattggcttctgtttcagggaacgggcaggtgaatttgtagagcatttgtgattgaatggtgatgcttttgttactacaatgggattgtgcggacgcaaccatgcgttgttattgtaggggaaaacaaatatattccatccgtttcatattatatgacgcttcgactttttttcctagtctaaacttcttttaagtttgactgagtttataaaaaaacatagcaacgttttcaacacaaaacaaacatgttatcaaaatatatacaatgctagatttcatgaaaccaatttggtgctgtcgatgcttctaaatttttttataaacttggtcaaacttaaaagaagtttgactaggaaaaaaagtcgaagcgacttataatatgaaatggagggagtattatttatagatgatcgatcttttcagaatggaaatgtgtgatgtgtgttgtgcccaatgttgattgatgttcataaccctgtactccagagcatcttgaaagctcatcctcaccgagtcgctgtataattcatgtctaaatcactatttttttctgtctgtaggtagttctgaaatctgaattgtacttccattttttttttgttcttctgttttgttgggtaatgccaaggggactaacatagagtcattttcttcaggaagcagcatcctctggtgtcaaatttctttgctttcctgaggtattctcattcataggctccaaggatggcgagtctattaagattgctgaaccattagatggcccaataatgcagagatattgctcacttgcaaagttagtaagaacaaacttgctgaatttccattttgccattacatataagtgcctcttcataggaaccccttttctcaatttactttatttattagagttcacattatatgacatattaaatttaagtatttagtattttgtgttctcaatcttgacttctgtgccttacaattgtacaaatgaatcttctgatcatttgttcagtatgaacatttggtcaatctgttaacttagaaattgttttggcttatagaaagaatgaaaatctatctaatgctctgtaatttccagtttaaggaccagtgtgcacttgtcgtgcttattttgaaagctaccgcaaataagtaaatttcataactcccagtgccctgtttggtaaattagactgtagcttaacaactcctgtcatgtaatagtttaatccttctaatttcctctagcatgaacctttgatatgcgattctctgatatattttgttatgtggaggcagaacacaataataccactttcacaacacaatctagaaaaaagaactagccaaatatcaaaacatgcatatatgatatatgatgactaatccattccaccacaaggccaaatggagactagctgtgtcttgagtcttgaaacatatttctcttgtattttttaaggattttatttggttatcggatagcactttgagtccttgacttaacataatttcatcctgcagggaatcaagtatgtggttgtctcttggagggtttcaagaaaagggtcctgatgattcacaccagtacaatactcatgtactaattgatgattctggagaaattaggagctcatatcggaaaatacatctgtaggtgcttattctttctcagctcttaggagaaacatgccttcaagaattttctaaacagtttacttgcgatgcctattttaggcattcttagaattttaacagtagttttttcaagttgacatagtaagggcatgatatttgatgctatgcagttaagtactagaagtttcatatgattgttggttctaacaagagaacatttatcttacaatagccatggataaaatagatttatgagaaatcgtcacaatatcccagaagtatatttctgcattactttactgtctaaatggtgaaatttttggtcgtacgcaagacaactgttgcatctttcttcgtttcttcttgcttgttatggtacactgcaacatctcattgttcagatattcaccttcacatttttacgctgaaggtttgatgtagatgtaccaggcaatatggtgtacaaggaaagtcgttttacgacagcaggtactgatatatttcctgatattttagttttgtcatattgggatatgtaaatttttagagttagttctaaaatatcacttaaccaattgtacttttatatttcaaatccccctgcggaatgttgtgtttgtcacataaattattctagaattaatttattatacctaaattatcaacagtttcttgatgtactttttaatatgctcaattaagtgtcatagtcaatgtaccactaccacaatatcagttcaatattcagtcttagaacaaatttttatgagatgtttttggtctgcaccatcctgcactatcttattagtttctgttcttctagaagttactctgttatagaactcatttttttcacattgaactattgaagcctatttaagccaactatctgatttctagtgcacatgactctcgacaagatagttttatgagcgcaagatgggacactaacttatgcttctacataaactttagtatgcattgcatatccttgggtcaggcattatcaactgaagctttttttcttctgaagccaaatataaactgacttgattgaaaagtgattgaaactaatactgcaatagtgatatcatggagtgagacatacgtcgggttgcagttgataacgctatatgtgatggtgtatttatttatttatcaggtgatactgtcgttgcagtggatagtccttttggacgacttgggcttactgtttgctatgatttgagatttccagagctttaccaatgtttgcgctttaagcatcaagctcaggtagtgatttatggcattatactgacataagtttttcctgattgccttatcctaagcatacctgtcatatctctgaggaaagctcaggtgaattgcatattgttttccagtattcttctaatatgccagtgacctttttaggtcttactagtaccatccgcgttcacaaaagtaactggggaggcgcactgggaaattcttctccgagctcgtgccattgagacacaatgctatgtatgcaaatcctaactcttataagtctttcacttttgcagacacatcaggctgtttcatatggttgggagtgtgatcaataatataaaatccaccatatatgcattacatatttgttattgttaaattttcaagatttgcaataggttattgcagcagctcaagctggaaaacacaatgagaaaagagagagctatggtgattctataattattgacccatggggaacagttatagctcgacttccaggtatatctcttcattttgttactgtcttctatcagaaatcttctgttgatattttgaaggttttcttgaattttatcagcaccttgtaccttgacaaccaccaagattttattgatcttctgttgaactcctcaacaatatttgctagcactgaagtttgaacttgtcctggaaaatattgtagtctgccattaccatactgcatttatcgtgtttgtatttgttcaaatacaatattctgaaattatgtggaacgagtgtgtcacagtatgcccgttaaatatcgttctgaggaattaatcatcaaactttggctacagaccggctgtccactgggtttgctgtcgcagatgtagacttgtcaaaagttgaggctgtgcgaactaaaatgccaatctctgaggtaatactctcatggagatgctgtttgcttctgtccaagaaacaccatttagttgtgttcttcaataacagtttatcatcttattttgtagcaccggaagtttgacagcgtctggaaaacctcatcactgtaatagtatagaggtcttgcacgcctcctttctctttcttttttctttagagaacagtcgacctattattttgtgtatcaaatatcaattgcaaggcacacatgatgatccaatggtttgatcggcggtaaacttcaattgcgaagccatggttgctgtgaggtttcttggtttgaagaattcctggttcagtggaacttcaagatcccaaatccccaattaggctaggaatgatttgtcagaccaaatagtccataaataatagtgttggcttgaacgcgacgccaccaacctaggacatttcaaataagtgattgccattgaatctaatgtaaatttgttatggtacatttgttgataaatcaaagcttggattttttttttggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0502500, RefSeq:Os12g0502500