Os12g0503000

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0503000| Description = Similar to Allantoin permease| Version = NM_001073365.1 GI:115488691 GeneID:4352286| Length = 5251 bp| Definition =...")
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Gene Name

Os12g0503000

Description

Similar to Allantoin permease

Version

NM_001073365.1 GI:115488691 GeneID:4352286

Length

5251 bp

Definition

Oryza sativa Japonica Group Os12g0503000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19325430..19330680

Sequence Coding Region

19326054..19326212,19326906..19327280,19327827..19327948,19328020..19328063,19328309..19328483
,19328608..19328752,19329144..19329380

Expression

GEO Profiles:Os12g0503000

Genome Context

<gbrowseImage1> name=NC_008405:19325430..19330680 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19325430..19330680 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatcttgtgaaggatatcggcggcgccattgcgctgatgggcgtgtcactggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcccgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgccttcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctcacccagatgcaggacaactggccttcaatcttgttcgcgatgtcgggtggcatctttaacggcctagggacactggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaagcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaaggcggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttgttcactcttccaatgctgctgacaaccaggagaagctgtctagtgccatggtgaaccacagcaacaccaatggggacactgaaaatgaagaactcaccaagcacctccttgagatagaacaacccaaggattgtgaagaacaagagcctgaagtggcaccggctgcccaggctgtggaaaaactagaggcaggaacagctgatttcctggttgaccttgaggggaagagatctattaaagtgctcggatcgaacaccttcctgggcctcggcatcgtcaccttcgccggcgtgagctactccctcttctcgccggcgttcaacctcgccaccaacgaccagtggcacacgctcggggagggcgtcccccacatggtggtgtacacggcattcttctacttctccctcgcctgcttcgccatcggcatcgccctcaacatctggttcctctaccaccccatggtcggcgtgccgcggtcgtcgctcacggcctacctgaaggattggaaggggagggatcttgctctcgtcgcaggcatggtgtgtggccttggcaatgcgttccagttcatggctgggcaggctgctgggtatgctgctgctgacgctgtccaggcgttgccgctggtgagcacggtgtgggggatcgtgctgttcggcgagtaccggagatcgtcgcggcggacttacactctcctggggagcatgctgttcatgttcgtcgtcgccatggtcatcctcatggcgtcgtcggcgcaccggaggccgctctga</cdnaseq>

Protein Sequence

<aaseq>MYLVKDIGGAIALMGVSLVLLGTWPVVLAVLERRGRLPQHTYLD YSITNFLAALLVAFTFGQIGADTPETPNFLTQLTQMQDNWPSILFAMSGGIFNGLGTL ATQYGWAFVGLSVTEVMASSLKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAACLGS LVHSSNAADNQEKLSSAMVNHSNTNGDTENEELTKHLLEIEQPKDCEEQEPEVAPAAQ AVEKLEAGTADFLVDLEGKRSIKVLGSNTFLGLGIVTFAGVSYSLFSPAFNLATNDQW HTLGEGVPHMVVYTAFFYFSLACFAIGIALNIWFLYHPMVGVPRSSLTAYLKDWKGRD LALVAGMVCGLGNAFQFMAGQAAGYAAADAVQALPLVSTVWGIVLFGEYRRSSRRTYT LLGSMLFMFVVAMVILMASSAHRRPL</aaseq>

Gene Sequence

<dnaseqindica>4469..4627#3401..3775#2733..2854#2618..2661#2198..2372#1929..2073#1301..1537#taaggtttagctatagctaagctcactgactatgcatgaagcttccagaggcagtgaggcaccacaaattttcagacacatgctggctggagtagtgtaaatatacacacacacacactctctctctcatagtaacagggctcaagggccaacaagattagcactcactggttcttcttccttgtttatttggtatgttcattagttctttgctttgcatgaaaaaaagctagctgttatgttgctatttctgcacttaccttgagcaaaactgttgaggtgttttgctgtgaatgtgtgttctgggtgttttggtttgttccaagataatttaacaaggctgctagatctgtttcaagttcagttcttgagctcagagatggtttcgttgtgcttcttgaatctttagcaatcctagagctgtggtctgtggtatgcaggaacatgaagcttctcttctccatttcttccagagtttatgggaatcgttgtggttcacatgttcttggtgttagaacatgcaagtgcatgtgcattgacttcttaatttgttgttcctgcaagtgcatgtgttttctgttatttgctcacacagtgtgttggatcatgttgacttgaattatttatagaagagattgttttggagagcatagatctttggaaagtaatgtccatggattatgctctgcatctttctgcgtcttctttctgatgatgctgaaaatgcttcttgtaatgtttccactccaatccaaagctgttcttagcttcactcttcagtgttccttccttctgtgagttcacttatatggtacagctgaacagagactgatagaagcttggttcctggattgaattttaagttattttagccttttgttgtagaggaatctgatctgtatatgttgtcggaaagttcaggtgaacaattcttctttgttactacctctgctgtttcctgaacagttcttgagctgcaaccatgtagctgaagctgtatacttgtatttcgctttcagagatcacatatttccatcgcacacctctcttacatcttccagagttcagtctatgttttttttttgttctcatgttcttggtttcaatgcaatacacaaaatcctaatgaatctttcccactgagagtttggattgaatcttgttctttccagttcatagctttacacagtgatctgttgctcactgactttgcagagtaacaccgtttaccaagtctgacagagtttcatggagcaggtaattactctgtccctgattcttctccggctccggcgagatcatgtatcttgtgaaggatatcggcggcgccattgcgctgatgggcgtgtcactggtgctcctgggcacatggccggtggtcctcgccgtgctggagcgccgcggccgcctcccgcagcacacctacctggactactccatcaccaacttcctcgccgccctcctcgtcgccttcaccttcggccagatcggcgccgacacgccggagacgcctaatttcctcacacagctcacccaggttagtgcccatggttattcttgtctgaatttagacatgttagtctgaaggaagtgatgctcatttcagacattcagtatgttggtctagtacagttttcagacttttcagacatggggtacaaccttttctgaaaaactgtggtttgtcactaggaagtgaattttgttggttttttacattcatgttggatgtagaggccgggttccaatccattgtctaaaaaaaaagggaagtgaaccttgtttcctgtcggaagaggccaaagatgtaaactgttttcattatctaaaaaaaggaagtgaacccagtgtatcaggcttgtgttaatagaaaactctgaaaatttcagttgatcaatgctggataaccttttttttttcaaataaagatgcaggacaactggccttcaatcttgttcgcgatgtcgggtggcatctttaacggcctagggacactggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaagcctgaaggttgtcataggtacaaaaaaattcagagtgatatgctctcctgataataagaatgatgcctgatgcttgtatagcatttactgttcagaatctgaaaatgacaatatggtgtgactgagaaacttctcttccagggacaacactgaactattttctcgatggccggatcaacaaggcggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttgttcactcttccaatgctgctgacaaccaggagaagctgtctagtgccatggtgaaccacagcaacaccaatgggtataaactctcttcttccgtttttcactcatgtggtgaatccgtttcatcagttctgcctaaattctacttctgaaatactgaaaattttgaaaaataacacgtatataaggtaatttgcttttacttgaattttatttggttgttgctaattgcgaccaatgtatcatttgtgcatcagtacattattccaatgcagtaaattcatctgaacaaacaatgtaattaacttgaactctcaacagggacactgaaaatgaagaactcaccaagcacctccttgagataggtactaatcagatttagtctgaaaataatagtatatcatagagctatgtgtactaatctttcaattgacagaacaacccaaggattgtgaagaacaagagcctgaagtggcaccggctgcccaggctgtggaaaaactagaggcaggaacagctgatttcctggttgaccttgaggggaagagatctattaaagtacgtacttataatactaaccgtaccaatatattagttaaaatgtcatgactaaactgcagaaattcaggtggagcaattgcaaagcagagttgctagcaaaatttccacaaatgaaaatccatgtatctctaaggaactttttttaaaaatctgacacaaccttccatgtatttccaacatactccctccgtttcatattataagtcgtttgactttttccccagttatacttcattaagtttgatcaagtttatagaaaagtataatagtattttcaataaaaggcaaatgtattatcaaaatatattcaatattagatttaataatctaattcgatattttatatgttactaagttttcctatatatttagtcaaacttaacaaagtttgactgaaaaaaatcgaactgacttatgatataaaacgggggggaagcagtaaaattcacactttcacaacagaaacaccaactcaacaacattaatttgtttcttctccatgacacaaaagaccttctgaaaaaaaaaaaacttcacattcaggtgctcggatcgaacaccttcctgggcctcggcatcgtcaccttcgccggcgtgagctactccctcttctcgccggcgttcaacctcgccaccaacgaccagtggcacacgctcggggagggcgtcccccacatggtggtgtacacggcattcttctacttctccctcgcctgcttcgccatcggcatcgccctcaacatctggttcctctaccaccccatggtcggcgtgccgcggtcgtcgctcacggcctacctgaaggattggaaggggagggatcttgctctcgtcgcaggcatggtgtgtggccttggcaatgcgttccagttcatggctgggcaggctgctgggtatgctgctgctgacgctgtccaggtacaccatctttcttcaatccaggccgtctgcagtactgctgtcgaaactaaatttctgctattctaaaagggtagcaaacaagctagaaaagtagatgggttatgagacggatgatttatataggttcacgtcttataggtatatggtatccataatctccacaactgtagaggatctttctcagctcaatttgcatttcttgggagatattctctctcgttataaatatttgatgattaggataagatttcattaaaattttgggatttgacattcagtaacttctcaatttggctgtatatatccacttgtagatatatagaccggatttctacccattatcttttttaaaaagtattttttaaaaaattattggtttaaaaattagtgtgtgcagattaggataaacttgttctgaaataaaattaatggccaaagttttgatttgaccaaatcttatcctaaacgttaaatatttacgacctggagagaggagtacatgacttgaacattttatcaggcaagcattaatgatcctcaagatgaagattcatatgtgcaaattatgatctgatcatggttttggaatttgacagtatgagaagaagacgatatgggttttctgaaactctgaacatgaatgggccggggcgtgtgtctgaacttttctgaacattatttctgctgcaggcgttgccgctggtgagcacggtgtgggggatcgtgctgttcggcgagtaccggagatcgtcgcggcggacttacactctcctggggagcatgctgttcatgttcgtcgtcgccatggtcatcctcatggcgtcgtcggcgcaccggaggccgctctgatggcggccggccggcggctgccgtcgacctcctcctctcctcatggacatgaccgagaaacatcagaagaagaagaagaagctgcatatgtacagctccattgatctgaccacatcagtgtgtagttcctgaccttctcgacgtaggatctatgcatattgcctcccggtgcttgcgcatcggcgaggctacacatcaattaatttcttctgcaatgagcaaccatgggatgggggagtgaatttggagatgtgattggactagtatatagtgtaatgttgtaatatatgtctcagcttctttgtgtgaagcttctgtgaagggaaccaaaataattttcaaatgtataaattttgatcaatgttatgaggagctacttcctccgtttcacaatgtaagtcattacattcatattaatgctaatgattctagatagatatatatgtctagattcattagcatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaatggagggagtagctattaaggctagctctagtaaaaccagattaataacctttttgtaatcctcaaagtagaaatgttacaactttgacaatgaaagaatcaataatggcattatgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0503000, RefSeq:Os12g0503000