Os12g0508100

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0508100| Description = Similar to Acrosin precursor (EC 3.4.21.10) (53 kDa fucose-binding protein)| Version = NM_001073381.2 GI:297613229 Ge...")
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Gene Name

Os12g0508100

Description

Similar to Acrosin precursor (EC 3.4.21.10) (53 kDa fucose-binding protein)

Version

NM_001073381.2 GI:297613229 GeneID:4352306

Length

5422 bp

Definition

Oryza sativa Japonica Group Os12g0508100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19658076..19663497

Sequence Coding Region

19658076..19658432,19660662..19660890,19662661..19662785,19663486..19663497

Expression

GEO Profiles:Os12g0508100

Genome Context

<gbrowseImage1> name=NC_008405:19658076..19663497 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19658076..19663497 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccccgaccggagcgctccacgccggcggccgccacctcctcccgctccgccgcgccccgggtgcggcccagcagccatggtcccacgtccgctcccacctcatctcctcctccaagcgcccctccccctccccctccccgccgccgccgccgcccccgccgctgccggttgccccgtctacctccgccttcgtgcagaccgcgggcaggaggagcgggggcggggccggggccggggccgccgtcgggtccggggtggtcgcgtggtacctcggctcgatcgaggcgcggcccgtgctgaccaagagcgtcaccgccgccgccatcttcaccgtcgccgacctctcctcccagatgatcacacttggccctgaagattcacttgatctagttaggactctgcggatggctagttatgggctgctgatctcaggaccttccttgcatatttggttcaactttgtctcaaaattgctccccaaacaggacgtaatgaacaccttcaagaagatgtttcttgggcaagcggtttatggaccaattattaattcagttttcttctcatacaatgcaggattgcaaggtgagaccatcccagagatcatggcaagactgaagagagatttaatcccgaccatcaaaagtggacttatatactggccactttgtgactttatcactttcaagtttatccccgttcatttacagggtctggagtag</cdnaseq>

Protein Sequence

<aaseq>MPPTGALHAGGRHLLPLRRAPGAAQQPWSHVRSHLISSSKRPSP SPSPPPPPPPPLPVAPSTSAFVQTAGRRSGGGAGAGAAVGSGVVAWYLGSIEARPVLT KSVTAAAIFTVADLSSQMITLGPEDSLDLVRTLRMASYGLLISGPSLHIWFNFVSKLL PKQDVMNTFKKMFLGQAVYGPIINSVFFSYNAGLQGETIPEIMARLKRDLIPTIKSGL IYWPLCDFITFKFIPVHLQGLE</aaseq>

Gene Sequence

<dnaseqindica>1..357#2587..2815#4586..4710#5411..5422#atgcccccgaccggagcgctccacgccggcggccgccacctcctcccgctccgccgcgccccgggtgcggcccagcagccatggtcccacgtccgctcccacctcatctcctcctccaagcgcccctccccctccccctccccgccgccgccgccgcccccgccgctgccggttgccccgtctacctccgccttcgtgcagaccgcgggcaggaggagcgggggcggggccggggccggggccgccgtcgggtccggggtggtcgcgtggtacctcggctcgatcgaggcgcggcccgtgctgaccaagagcgtcaccgccgccgccatcttcaccgtcgccgacctctcctcccaggtgggtgtctctcgttcgctctctctctcccaggcgtttgtggcgcaggagttttggatcagttaaaatgttgctgatgagaggaaatgctattgcttttattagtataagtcgtttgtattgaatgcaatttcgatcgtgtatcacggccttggttcttttctgattgtagaaagcgctaaagaatcaatttgtgtgttatatgttgtgggaagtgtgatatatgtttgttaaacatacaatgtgccaatgtgatgaatacctacaatatctatctggattagtattggtgtttagaggattgactgaataagattgtaggaagggaccaggtaattgattcgaaagctaaacctgagacagtaatggggatcagaattccattacaaatttgagtcatggtacttaattgcttctgttgtgcgattgcttacaagagattcacactagccatgtatctgccagcctgatattggctggtaaagtttgcagtgggaattatgttggacattatggttggaaatcggaataatggtcgcttgaaatacctgtattgtgtatgtacaaaatgtaagacaatggaacttgtcggaatatagaacaaaagtaacgaaactttgtagaaatttaccggtttgtgttattggcttgtgattttcttgtgttccatacattctgatccatatttttgggctttgaactgttataggtattgcatattttatagttgggatgtaatagttagtataaatctgctgatatctgtagtactcatcatttttaagttcaaatgagtttattcatttaaaaagtttataaaaatatattgtactgcactattggctaaaccccaaaactcaaagcactcccaggatgattcccaggttacattgacctctcagggaagagagaatacttagactaggagtatgtacattttggggatgtagctagatctacttcatgatataatgataacagtggtgtcctcgtatagtttatagaggtgctagatgagtactccatctgaaaggaaatagaaaacatagcaactaataatcctaatctcctataaatcaatacttctggcttcattaacaacttcatttacctgatctctttgcctcattagggccttggcccatgcccatgacataacactaccattgccttctgttgtgtcgggtgagatttgattgagggtgatagcttgcctgcaattccgattgtcgactagatcattccacagaccacagtggtcctaccatgtgggcttcagcgactgcaacacaagttttacccctgttatgcagtccaaagcatcacccgaagccattatgcactggttgggcactaaggcccaatggctgagccagcaacactattgagtccatacagcaaagagagaaagcctgaaaggtgttgaacttttagttgatcctcaagggttcaccaataccatgcttgtttatataagaaatcgtatgctcaaattatgcaccagacaaaacattgtaataaatctagaagacaaaatatctgtcgtattaaaaaatggtgtgcatgtaattaagccaggctcattctccgggatgaagcagtaggccagtatctgcgtttgatcctattggtattattttattgtttttgtagagggtagcacttccataaatgttatgaagagaaaccttccagctgtttctaattcttgattacctactaaatatggggttctgttgtataaaccatatcatccagcatgttatccttgtaagagcttttgtgctaatcaatcatttgcagtgtttattattagtaacctacgaaaaaaagtgtcaccaataatgggtggcacatgtcattagctacataatatggcgcagatgtgcatcattctgaaaatatgtcttgatttacatgtctatggaaattcctcctggaatttgatgaaattcctgcctttcaaacaggaccttaagttagataggtttcctgatcctgtttatattagaagtaggatacatgattaatattatgtgtaagaggcttattttatgttgtgtcctgtcatactttgatcatttaacccgtattatttaggcttctaccttttatttataacgtttttgtttttcttggtttctatcttcaatttacaatgttcttgttttgctttactatgtcaagtcatgtgattcttttgtgttttttgctatattgcctcatcagatgatcacacttggccctgaagattcacttgatctagttaggactctgcggatggctagttatgggctgctgatctcaggaccttccttgcatatttggttcaactttgtctcaaaattgctccccaaacaggacgtaatgaacaccttcaagaagatgtttcttgggcaagcggtttatggaccaattattaattcagttttcttctcatacaatgcaggattgcaaggtatgatgcacatgcctctgtgaacaaacttggattcttttctttttccgaagaacaaacattgattcttaaaaacatctattttttctctgtttggtgtttatgtgcctttgcatgtgcaaatcgttgataagaaattaagaatttaatttaggcttcctttgacttgtttctataactcttaccttaaagtgctacactgacctgttaactactaccatgatgcttatgctgaccatggctgaaaactctattttgataaaatgttagtaaactactgattgagagttgagactgcagcatataggatatgacatgatcgacctgctaccttttgtagtttttttttattggcgttcaatggtgaggtaaagagctaaggatatgagattatgatgcattcttcagactccctatcctgtccaatgaaaataatataagaaaaaacctttagaggcattaatcttgctagttgctacacgagcggtccagtattgctcagtagtacactctctgatgcagtggccgttctgtttatatggtttctcatttctgtaaggtgcaacaattaatgtcttgggtagaaatcaccaacattgcgcatgttagctataaattttctgtctcactgtctgtattgtgtgaaacaaacaaaaatatccatgtgacaacaggtttgcacttccgtttaacacggttttgttggttaggtgtcttgagtggcaaatgactgaagacaatatttaatgtccatatttatctgattaggtcaggaccttgaggaaactgttatttggttagatcctgtgtcaaacacttaacatggtcaacaggtgactaaagttttagcaccatccatgttgtatgctttgattgctatctagtgtcacaatcactcctaaattgaaaaaaaagctttgtatgatgaaatgcagctgcttccacatgctgatataggccctgtttgggggagcttgtcccagctgcagcttttgccaaaagctacttctgctagaagctgccccaaacagtccacagctttttgaaaaatgaactaagaagccagaagctggagaagctgggtttcagagcttttccagattctcagaagctggctaccaaacagctgcttctcagaatctaaagctcccccaaacaggcccatactctgtagatgtttcagtttcaattttgcgtctcattcatgcataccttgatgcattgtgcattgaggttctgtagattgctaaatgcaactaaggtgaaaaatcaagaccaatatatatttacatgaatggatgtgattgatatataaaatgaactcaggtagcagtataagatccagtagtaaattgacttatagcacatcgtcatgtactgtgaaataaagttgaaatttcccatatgatcccagattcagattagaaaaatataaatttagcaatgtacttagcaaaaatttgtaattgaaatttgcaagttgataactttagagtaccaccagttcattataatctttcctttttgaagtagtcatttcaagtgaattccttgaagtctctgatctatcgatttaggataaggttgcgtgcactatacatttattaccactatgtactgtttagcatgatgggagaagctatgttcagataggcttagatggagtacacctttcccactatctttatcacatagaaatttttcttgttgaaacttttgtagcaagcaagctcctgtgtgccctaattgcttgtttgatatgattcataggtgagaccatcccagagatcatggcaagactgaagagagatttaatcccgaccatcaaaagtggacttatatactggccactttgtgactttatcactttcaagtttatccccgttcatttacaggtaacatcaatttcccaacacttgtacctatttgaacacattatctcattctgaactgagtttttttttccccgcagccgctagtgagcaattccttctcgtttctttggaccatctacataacatacatggctagcttaaagaaagcagatgttgatgtgaccacgagttcataatcagagctgaatgaactccatgtgtcgattgtgttaactattagtacttttgcaagatggtcttcacaggaattaactggactatgatgcggctggctatatcactatctgctcctctcaatgggaggctagaaacagagatgaacttatccctacctattatttctttagtggtgtatagtgtccactaaacctgcttcctcttttttcccatttttttttattttggcctgaaggccttttgtttggatgatagaggaaacccatactaggcatttattctatctttccgggtttctcattccacggctcagaagccaagcaattttcaccaaatttactgtaaccagctatggaggtgtaaggtaattttgttcttttcagtaagataagtcggaccgaacaaggtttatgctccaacatcttttacatatgatgcagcttttgttgaagaatatatatttctttggattttcttcttctatgtctgaagaaatgattttatatttcactaactttcatagggtctggagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0508100, RefSeq:Os12g0508100