Os12g0515600

From RiceWiki
Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0515600| Description = Similar to Guanylate kinase (EC 2.7.4.8)| Version = NM_001073419.1 GI:115488799 GeneID:4352344| Length = 4005 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0515600

Description

Similar to Guanylate kinase (EC 2.7.4.8)

Version

NM_001073419.1 GI:115488799 GeneID:4352344

Length

4005 bp

Definition

Oryza sativa Japonica Group Os12g0515600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20173632..20177636

Sequence Coding Region

20173958..20174033,20174141..20174249,20174342..20174387,20174486..20174621,20174730..20174851
,20174929..20175291,20175899..20176028,20176114..20176187,20176605..20176694
,20176821..20176823

Expression

GEO Profiles:Os12g0515600

Genome Context

<gbrowseImage1> name=NC_008405:20173632..20177636 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20173632..20177636 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgaagaggctccggagtttcgtgtcgagagcgtcgccttggaatccaaggactgcctgcagaatgccatagatataggcgataagacgtatgttatcagcagatcagatgaccccaagtcatcgattaccatcaaaattttggacaaactaactcagacttgggttgtacctacagtacttggggcacctccaaatccaaccagctcacactcagcggttctcgtaaacaatgagaagatactgattattgagaagggtgttcccttgaatgattctatctggttccttgaggtagacactccttttgttaagcagcagagcaaaattaagggcacagttgttgttgcatggagcaagggagtaattggtgagggccaaaagccaattgtgattagcgggccttctggtgttggtaaagggacattaattgcaaaattaatgaaagaatatccatcaaagtttggattttctgttagccacaccacaagagctccaagggagaaagaaatagatggagttcattaccacttcacagaacgaagcaagattgaggaagagataagtgagggcaaatttcttgagtttgctcatgttcatggaaatgtctatggcactagcgttgaagcagttgaatctgttactgatgaggggaagaggtgtattctcgacattgatgtccaaggagctcgttctgtgagggcttcttctcttgaagcaatattcatctttgtatgccctccatcgttcgaggaactagagaagcgccttcgggcacggggaactgaaacagaggagcaaatccagaagcgactgaggaatgctcgtgcagagcttgaccagtccaattcaccaggtcttttcgatcatcttttggtaaatgatgaccttgaagcttgttatgaaaatttgaagaagttgctttctttggatgatgaccacgaagattcaaatgattctttcatcaaggacgggaaagaaactgcatgttactcaatcctgtccaaaacaaactcagaaattttgttgcaatctgagactaacgaagcagagaaaggaaccacaaacttgttatcgctcgacttgtctctctcaggaggtgctcctggacgaacaaggggcctcaagatatccccggttaactag</cdnaseq>

Protein Sequence

<aaseq>MGEEAPEFRVESVALESKDCLQNAIDIGDKTYVISRSDDPKSSI TIKILDKLTQTWVVPTVLGAPPNPTSSHSAVLVNNEKILIIEKGVPLNDSIWFLEVDT PFVKQQSKIKGTVVVAWSKGVIGEGQKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSV SHTTRAPREKEIDGVHYHFTERSKIEEEISEGKFLEFAHVHGNVYGTSVEAVESVTDE GKRCILDIDVQGARSVRASSLEAIFIFVCPPSFEELEKRLRARGTETEEQIQKRLRNA RAELDQSNSPGLFDHLLVNDDLEACYENLKKLLSLDDDHEDSNDSFIKDGKETACYSI LSKTNSEILLQSETNEAEKGTTNLLSLDLSLSGGAPGRTRGLKISPVN</aaseq>

Gene Sequence

<dnaseqindica>3604..3679#3388..3496#3250..3295#3016..3151#2786..2907#2346..2708#1609..1738#1450..1523#943..1032#814..816#gtaattaaaaaaaacaaaataaaaaaaagcccacaaaaaaaaaagaaaaaaaaagagagagagaagagaagaaaaagtcgtataaagccgccgcggcgtcgacgtcgacgccgtcgcctcctcctccccaccaaattcctcctccgattcgatcctctcctctcctccatcgccgccgccgacgcccgccgcccgcctccgaccccctcctgctcggcgtcagcattcttgggcgggtttcggtttcttggggtcgtcgtcgtagcggccaccgagaggggatcaagaagctgaggatcgcggtggggcaacgaggtttgcagccgctccgatctctcctttgggatctctctttagggctctccctgaccgttcttgggatggttgtgggggttggggggtgtgtgcttctgttgtttgaccaactattgccggatatattactattagtgcttgtttttgttcttgtgtggatctagcttttggaatggtgatgagtcatgttggtttagtgtggattggtttgtggtttagtttgtgctctctgtggattggtttggtcttgaaatgtggggggttcaggggcttggtttagtggttggggggtgtttgggttcttgttttggtatggtatggtggtggtagttcttgaatgcttactatggatagatgtgtgtgggaatggtgtcttcaattcagtctccttgtattagtaaccagaatgtgtattcttgtattatgttctaattgttcggttgttttatttctgtatataggattggaggcgcgtctgccctgatcacggcgcattttatggtgagtttagctgtggtggatatttcaggggcttgccaatgtgctgcttattatgtgtggatgccaagaagagtttgttaaggggacccgcatgcttaacttgctctggttttgatttggccacagggtgaagaggctccggagtttcgtgtcgagagcgtcgccttggaatccaaggactgcctgcagaatgccatagatataggcgataagacggtaagttgaattaataggttcatttatgtactgtaactttggtttgattttacatacccatgatggttgtcctccttgtttgagatgctaggctgtgtgctgtcactttgtgttatgttgcttgagtttaagaaaacgtgttcgtagcaatctgtcaccactgataaatagcgccactattcattaaaattaactatgctgatagtgttgccttttcttttgaacatgactgataatgttcctaatatcaagtcaagtttatatctgtctttgctcattcttagttggaccagctagtactattgacagtatttaacgtaagtaaagcatactcccctgtgtattgtcaatcggtgttaatcttactagggagtactctaaatttatattgtaacagcatgttcttgctttttgcagtatgttatcagcagatcagatgaccccaagtcatcgattaccatcaaaattttggacaaactaactcagacttggtacgtgttctgtcattttggtttgcgatctctatttactgtgctttcattttggtagttagtcactcccattgtgtttatgcagggttgtacctacagtacttggggcacctccaaatccaaccagctcacactcagcggttctcgtaaacaatgagaagatactgattattgagaagggtgttcccttgaatgattctatctggttccttgaggtaaagctggaaaattgatgcaagcgctcttcttttctttacttctgttctcttttaatttacggaaagtaattagtttttagttagcaccaaggaaactgcatactcttatggtttcctttcatacaaacttaacaagaaaataattttcttgctgttcctgtagactctcatgcatattgattgttctatagttatataatatatggtatataataatgctacttccgtctcttgtattacttgtaagctagaagtctattcttttattcatgtcataacattattatgttaatctgctggtgtggtgcattatgccagtttgttaatctgaaagtgtatatttttcgttcacaagatgctagctcaggggtctttttgtgtttcatattttctgcattgacctgaaagcatggtttctctttcactagatgccagcacaagggtctatttgtgtttcatgttttctgtgtgctttctgtctagaggcctaggagtatattgtattctcagtgcacttgatcagtatacttatctccttttcttttgcttttccaatattcaccttactgagatggcatggtttcttctgctttgtttattttaggtagacactccttttgttaagcagcagagcaaaattaagggcacagttgttgttgcatggagcaagggagtaattggtgagggccaaaagccaattgtgattagcgggccttctggtgttggtaaagggacattaattgcaaaattaatgaaagaatatccatcaaagtttggattttctgttagccacaccacaagagctccaagggagaaagaaatagatggagttcattaccacttcacagaacgaagcaagattgaggaagagataagtgagggcaaatttcttgagtttgctcatgttcatggaaatgtctatggcactagcgttgaagcagttgaatctgttactgatgaggggaaggtaaagttattactcttttttcatgaaaacttctgaaaggtgaattgctacatctttccattgctttttcattgaagaggtgtattctcgacattgatgtccaaggagctcgttctgtgagggcttcttctcttgaagcaatattcatctttgtatgccctccatcgttcgaggaactagagaagcgccttcgggcacggtatatttgtagtttacaaaatgcagtgatagcctaagctcatgtacttgattattcaattcctgaccatatgaaataaactttttgatttatgcactggctatgtaggggaactgaaacagaggagcaaatccagaagcgactgaggaatgctcgtgcagagcttgaccagtccaattcaccaggtcttttcgatcatcttttggtaaatgatgaccttgaagcttgttatgaaaatttgaaggtaattaaccttgtgccttggctgcataaactttccttgtgagagatgcttattgcaatacgctgttctgttccttaatttttacctgtgacctgcagaagttgctttctttggatgatgaccacgaagattcaaatgattcttgtaagaaacatgagcttttacatttttccttccattttattattattagtgtttcatcataaatctgatagtaactttcattatgggatcagtcatcaaggacgggaaagaaactgcatgttactcaatcctgtccaaaacaaactcagaaattttgttgcaatctgagactaacgaagcagagaaaggaaccacaaacttgtaagccatttccccctaattttatgtatggtaatgatagctgattcaccttattttcaagctaatgatagttgattccacgatcctctctatttgtattcctacaggttatcgctcgacttgtctctctcaggaggtgctcctggacgaacaaggggcctcaagatatccccggttaactagataactcaaaacattgttgctgatggcattgcagaagcactgacgagaaacttttgatcaacctgcttgagataacagattcagaaacaccctaggacaaaggaaataaaaaaaacatggaattcatttccatttgttatttgtttgccggagaggcatcagctactaggttcatcatacctgaactaggtgaaatcatagtgaggaattgtaccgtatcattgaggaattgtttgcttcattgttcttgagaggtttttttgttcgttgaacggagtacaatgagggctcctttatcagtgaagtaaaagaattcatgtagtcct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0515600, RefSeq:Os12g0515600