Os12g0517100

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0517100| Description = Cyclin-like F-box domain containing protein| Version = NM_001073426.1 GI:115488813 GeneID:4352352| Length = 2956 bp|...")
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Gene Name

Os12g0517100

Description

Cyclin-like F-box domain containing protein

Version

NM_001073426.1 GI:115488813 GeneID:4352352

Length

2956 bp

Definition

Oryza sativa Japonica Group Os12g0517100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20245062..20248017

Sequence Coding Region

20245248..20245281,20245942..20247413

Expression

GEO Profiles:Os12g0517100

Genome Context

<gbrowseImage1> name=NC_008405:20245062..20248017 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20245062..20248017 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccgatggtagtttcttccgatacggtgagcgccagatagcagctaaacctgaagattgcccagcaatgtcatcaatgttgtcattggaggatctcccggatgcattgctcgcagagattgtaaagaggattaccaacacaagtgacctgaagtccatttcccttgtgtcaaagcgtctgtacactatcgaggcggagcaaagaagttctatccgtgttggctctgacctttgtccagcgatagatgccttgtcagcactctgttcccgattccccaatttgttggaagtagagatggactactctggttggaaatttcactggaatctgctagaaaaacatattttctcattgcacttccctgtcctgcgtgatctcaccttatacattgatgatattcgtatgggttgtctagcttcttgcaaaaatttgatgtccctcaggttgaactctgtatcagcgataggctcatgtggacttctctcggtggctgttggttgcaagaatttaacttctctccacattattaagtgcaaccatattgttggcagtgataagtggctggagtacattggcagtgctgggtcactggaagaacttgtagtgaagaactgcaagagaatcagccagtatgatctcctaaaatttggccctggatggatgaagctcaagaagttcgagttcaagttcaagagaagtttcaacacatatgaacctcgtgacccctgttatgtggataactatcagtatggatatgatttctgctgtgaaagtttgagggatgtcactttggctacgattgtaactaaaccagagataggacttcgctgtctcctgacaaagtgcaaagcattagagagactctgccttcactatgtaattggcataagtgatcatgacatcattacaatctcccagaactgcagcaaccttagaagcatctcactttctcaagagatgctgctctgtgaaatacctggaggcacaggcgtaatggctaggacaccactgactgatgacagcctcaatgctctagccctgagatctcatatgcttgaagctgttgagcttatgttttatggttgtgctcctgattggccatctgagatagccttcacacaggatggccttgtgacactcctccagtcctgtccgattcgtcatctcgtgctacgtggtgctaacttctttgatgatgaagggatggaggctctctcatgtgcacaattcctggagacactggagcttatgcaatgtgttgcggtaactgatgtcgggatgcgctttcttgcacaaagcccatgtttgaagaatctcacgctgcagatgtgttacgaggttactgatgatggagtgtgtgaggtggctcatgcacgggatttggagtctctcactgttgaaagctgtaatcagatttctgtagaagctttgcatggggccgccaaatccgttcactacaaagttgattgcccaagctactacgatcgatataaagattag</cdnaseq>

Protein Sequence

<aaseq>MASDGSFFRYGERQIAAKPEDCPAMSSMLSLEDLPDALLAEIVK RITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALCSRFPNLLEVEMD YSGWKFHWNLLEKHIFSLHFPVLRDLTLYIDDIRMGCLASCKNLMSLRLNSVSAIGSC GLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEELVVKNCKRISQYDLLKF GPGWMKLKKFEFKFKRSFNTYEPRDPCYVDNYQYGYDFCCESLRDVTLATIVTKPEIG LRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSISLSQEMLLCEIPGGTGVM ARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWPSEIAFTQDGLVTLLQSCPIRHLV LRGANFFDDEGMEALSCAQFLETLELMQCVAVTDVGMRFLAQSPCLKNLTLQMCYEVT DDGVCEVAHARDLESLTVESCNQISVEALHGAAKSVHYKVDCPSYYDRYKD</aaseq>

Gene Sequence

<dnaseqindica>187..220#881..2352#atggcttcccggatcaatccccttcttcctcccgaggcgagggttttggcgaggagatcgagcagaggatctctctagcctcccgctccgcccaatccaccgtagccgcggcccatttcgttgtccgtccagccgcgcgccgccgtgcctttttcttggttgctgcggttccaagaaacccccgccatggcctccgatggtagtttcttccgatacggtggttagtcagtgcccttcttgcgtgtgcggttcttggaatttcttgttttctttgtctctcctagcgattgtttgttggagggataattttttgcttcttgtcaatggcggtcgccggatggatcagtggctcgttcgctccgtgtttcttgtaggttcggtggttgcagatgtcttaaggtgcaattcttgttcggttttgttaatgatagttagttcttggtcggagaggcagcaatctgtagatgaataattaggttgccactcaatcgacacaggaaaatgttgcggaagttcatgaccatatatatatgcttcttgatgagtttctctactgtcgatggcggataattctgcagctccttgttaatggaggttgctggatcggtggatatgaccattttatgcttcttgaatgttcaggttgcagatatctaggtttaattcatgttcgatttagttgatactagttagtttttgctcggagaggcagcagtctgtagacaaatagtcaggtctccaccttaattaatatttcagttgacataaaaatattgggaagttcatgaccgtatatatgcttcttgaagaatgtcttgtctatactgtatttcgatcacctttgatatgcatccttctgatccgattaatttcggtccagagcgccagatagcagctaaacctgaagattgcccagcaatgtcatcaatgttgtcattggaggatctcccggatgcattgctcgcagagattgtaaagaggattaccaacacaagtgacctgaagtccatttcccttgtgtcaaagcgtctgtacactatcgaggcggagcaaagaagttctatccgtgttggctctgacctttgtccagcgatagatgccttgtcagcactctgttcccgattccccaatttgttggaagtagagatggactactctggttggaaatttcactggaatctgctagaaaaacatattttctcattgcacttccctgtcctgcgtgatctcaccttatacattgatgatattcgtatgggttgtctagcttcttgcaaaaatttgatgtccctcaggttgaactctgtatcagcgataggctcatgtggacttctctcggtggctgttggttgcaagaatttaacttctctccacattattaagtgcaaccatattgttggcagtgataagtggctggagtacattggcagtgctgggtcactggaagaacttgtagtgaagaactgcaagagaatcagccagtatgatctcctaaaatttggccctggatggatgaagctcaagaagttcgagttcaagttcaagagaagtttcaacacatatgaacctcgtgacccctgttatgtggataactatcagtatggatatgatttctgctgtgaaagtttgagggatgtcactttggctacgattgtaactaaaccagagataggacttcgctgtctcctgacaaagtgcaaagcattagagagactctgccttcactatgtaattggcataagtgatcatgacatcattacaatctcccagaactgcagcaaccttagaagcatctcactttctcaagagatgctgctctgtgaaatacctggaggcacaggcgtaatggctaggacaccactgactgatgacagcctcaatgctctagccctgagatctcatatgcttgaagctgttgagcttatgttttatggttgtgctcctgattggccatctgagatagccttcacacaggatggccttgtgacactcctccagtcctgtccgattcgtcatctcgtgctacgtggtgctaacttctttgatgatgaagggatggaggctctctcatgtgcacaattcctggagacactggagcttatgcaatgtgttgcggtaactgatgtcgggatgcgctttcttgcacaaagcccatgtttgaagaatctcacgctgcagatgtgttacgaggttactgatgatggagtgtgtgaggtggctcatgcacgggatttggagtctctcactgttgaaagctgtaatcagatttctgtagaagctttgcatggggccgccaaatccgttcactacaaagttgattgcccaagctactacgatcgatataaagattaggtcattgctgactgtacatcatttgtagttgctttttcagttttacctttccaccatctttctgtacttgctgttgccacgtccttataccgcttattgttctcaattaaaccagtgtttaatggttatcttttgatttatgcaggtactacgtgtgatgagtgaaaactgggatcatttactgcaactgtgctgtataccatattatatgatcttgccaataacaatctcaatttggcctgtaagcagtactactgtttagctttgggagtgtctgcaactatcaactcttttgtcgacgaagcgctacagaaaggtggaagtggaactactgccaatcgtctcagactttcaacattttccttttgtgtatgccaccttcattgttatggcttacaagaaacgtttcaggatataattgtgcctacatctttaacagacgattatatgtttctatcacgttttgtttctgtgcctactctaacctctgtgaactgatcttttcgcttcctacaaaactggtccgaaaggcattggatcattgggtgtagtcaacaatgtacactgcattacctgcttatagtacaatataagatgtttattc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0517100, RefSeq:Os12g0517100