Os12g0520200

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0520200| Description = Phenylalanine/histidine ammonia-lyase family protein| Version = NM_001073432.2 GI:297613271 GeneID:4352358| Length =...")
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Gene Name

Os12g0520200

Description

Phenylalanine/histidine ammonia-lyase family protein

Version

NM_001073432.2 GI:297613271 GeneID:4352358

Length

2510 bp

Definition

Oryza sativa Japonica Group Os12g0520200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20437658..20440167

Sequence Coding Region

20438224..20439927

Expression

GEO Profiles:Os12g0520200

Genome Context

<gbrowseImage1> name=NC_008405:20437658..20440167 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20437658..20440167 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agatacctcaacgccggcgtctttggagccagccgcagcgacggctacacgctgccgacggaggtcactcgcgcagccatgctggtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgaggccatcgccaagctgctcaacgccaacgtgacgccgtgcctgccgctccggggcaccatcaccgcgtccggcgacctggtcccgctgtcctacatcgccggcctcatcaccggccgccagaactccgcggcggtggccccggacggcagcaaggtggacgccgctgaggcgttcaggatcgccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaacggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctggccgtccttgccgaggtcctctcggcggtgtactgcgaggtgatggccggcaatccggagtacaccgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatcatggagcacatactggaaggcagctcctacatgaggcttgccaaggagcagggcgagcttgaccggttgacgaagctgaggcaggacaggtacgccatccgcacggcgccgcagtggctcggcccgcaggtcgaggtcatccgcttcgccaccaagtcgatcgagcgggagatcaactccgtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttccagggcactcccatcggggtgtccatggacaacactcgtctcgccatcgctgccatcggcaggctcatgttctcgcagttctccgagcttgccagtagcttctacagcaacggccttccctccaatctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtcgccatggcgtcctactgctctgagctgcagttcctcgccaacccggtgaccaaccatgtgcagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatgacagcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgccaggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtgacaaatgtcgccaagaaatccctggccatggacgatgacgatctgctagcgctgctcggcgctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttgccactcatacagaagctccgcgcggtgctcatggaccatgcgctggccaacggtgacaaccagctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccacgacgaggtggaggccgcacgcgcggctgtggagagcggcacggccccgaacaggatcacccagtgtcgctcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgagaagacgcggtcgcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaagcacatcaacccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttaattag</cdnaseq>

Protein Sequence

<aaseq>RYLNAGVFGASRSDGYTLPTEVTRAAMLVRINTLTQGYSGIRFE ILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSAAVAPDGSKVDAA EAFRIAGIEHGFFALQPKEGLAIVNGTAVGSGLAAIVLFEANVLAVLAEVLSAVYCEV MAGNPEYTDHLIHALKHHPGQIEAAAIMEHILEGSSYMRLAKEQGELDRLTKLRQDRY AIRTAPQWLGPQVEVIRFATKSIEREINSVNDNPVIDVARRKALHGGNFQGTPIGVSM DNTRLAIAAIGRLMFSQFSELASSFYSNGLPSNLSGGRNPSLDYGFNGAEVAMASYCS ELQFLANPVTNHVQTAEQHNQSVNSLGLISSRMTAEAVTILKLMSSTFLIALCQAVDL RQLEESIKAAVNKCVTNVAKKSLAMDDDDLLALLGAAIDRVAVFTYAEDPCRSSLPLI QKLRAVLMDHALANGDNQLAKVAEFEQQLRAVLHDEVEAARAAVESGTAPNRITQCRS YPLYRFVRKELGAEYLTGEKTRSPGEEVDKVVIAMNQHKHINPLLECLSEWKGAPLPL N</aaseq>

Gene Sequence

<dnaseqindica>567..2270#aacaagctccaccgcaaagatcctctgttagctggacgacctgtggactgcggtacgtggcgctgcgagcaatggagtgtgagaccggtctggtcgaccgtcccctcaacggcgaccccttgtactggggcaaggcggcggagggtcttgcggggagccacctcgacgaggtgaagaggatggtggtggagtaccgcgcgccgctggtgaagatcgacggcgccatgctcagcgtcgccaaggtggcagccgtcgctggcgaggccgcccgggtgcaggtggtgctggacgaatccgcacgaccccgcctggaggctagtcgcgagtgggtcttcgacagcaccatgaacggcaccgacacgtacggcgtcaccaccggcttcggaggtgccgcccaccgccgcaccaaggagttcgccgcgctccagaaagagctgatccggtaggtaggagagtagctgtacactaatactattttattttatactcctaaattgctcgcaagcaataattaattatatgctaattaattcgttcattgggtctgaatgaaaataacatattaaagatacctcaacgccggcgtctttggagccagccgcagcgacggctacacgctgccgacggaggtcactcgcgcagccatgctggtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgaggccatcgccaagctgctcaacgccaacgtgacgccgtgcctgccgctccggggcaccatcaccgcgtccggcgacctggtcccgctgtcctacatcgccggcctcatcaccggccgccagaactccgcggcggtggccccggacggcagcaaggtggacgccgctgaggcgttcaggatcgccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaacggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctggccgtccttgccgaggtcctctcggcggtgtactgcgaggtgatggccggcaatccggagtacaccgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatcatggagcacatactggaaggcagctcctacatgaggcttgccaaggagcagggcgagcttgaccggttgacgaagctgaggcaggacaggtacgccatccgcacggcgccgcagtggctcggcccgcaggtcgaggtcatccgcttcgccaccaagtcgatcgagcgggagatcaactccgtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttccagggcactcccatcggggtgtccatggacaacactcgtctcgccatcgctgccatcggcaggctcatgttctcgcagttctccgagcttgccagtagcttctacagcaacggccttccctccaatctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtcgccatggcgtcctactgctctgagctgcagttcctcgccaacccggtgaccaaccatgtgcagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatgacagcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgccaggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtgacaaatgtcgccaagaaatccctggccatggacgatgacgatctgctagcgctgctcggcgctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttgccactcatacagaagctccgcgcggtgctcatggaccatgcgctggccaacggtgacaaccagctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccacgacgaggtggaggccgcacgcgcggctgtggagagcggcacggccccgaacaggatcacccagtgtcgctcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgagaagacgcggtcgcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaagcacatcaacccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttaattagctcaactacgtacgtacaaataagagaagacgaggtgtacgtctgacggatgaaaaattatttaaagcaaaagtactatcctactatatatacccaataattcacgcggcgggccggggcgtaagtgaataaagaataatggactatatataaatgtttgaccacttattataatcatggtgtacttgtgtcttacgttaagaaagctgcttatatataaataaaagtcattttaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0520200, RefSeq:Os12g0520200