Os12g0529400

From RiceWiki
Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0529400| Description = Similar to Auxin-binding protein 4 precursor (ABP)| Version = NM_001073450.1 GI:115488861 GeneID:4352396| Length = 1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0529400

Description

Similar to Auxin-binding protein 4 precursor (ABP)

Version

NM_001073450.1 GI:115488861 GeneID:4352396

Length

1981 bp

Definition

Oryza sativa Japonica Group Os12g0529400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21006844..21008824

Sequence Coding Region

21007103..21007205,21007623..21007690,21007871..21008071,21008279..21008385,21008669..21008810

Expression

GEO Profiles:Os12g0529400

Genome Context

<gbrowseImage1> name=NC_008405:21006844..21008824 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21006844..21008824 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagactagaactggaccaactgccgccggcggccatggcgcccacctcgccggcgccggccgcggcgccctcctcctcgcgctcgtcgtcgtctctgccgccgccttcctccccgtagccgaatcgtcctgcccgcgagacaattcgcttgtgaaagatgttagcaaaatgtaccaaagcaactatggaagggaagggttctcacatataaccattgctggtgccctagctcatggaatgaaggaggtggaagtgtggcttcagacatttggaccagggcaaaggacgccgatccacaggcactcgtgcgaggaagtttttgtcgtcttgaaagggaaagggacactcttgctggggtcaagctcaatgaagtatccagggcagcctcaggagattcccgtctttcagaatagcacattctctgttcctgtaaatgatccgcaccaggtttggaattctgatgaacatgaggatttgcaggtgcttgtgatcatttcgcgcccacctgtcaagatatttacatatgacgattggagtgtgcctcatacagcagcaaaactgaagttcccctacttctgggatgaggactgcttaccagcaccgaaggatgaactctag</cdnaseq>

Protein Sequence

<aaseq>METRTGPTAAGGHGAHLAGAGRGALLLALVVVSAAAFLPVAESS CPRDNSLVKDVSKMYQSNYGREGFSHITIAGALAHGMKEVEVWLQTFGPGQRTPIHRH SCEEVFVVLKGKGTLLLGSSSMKYPGQPQEIPVFQNSTFSVPVNDPHQVWNSDEHEDL QVLVIISRPPVKIFTYDDWSVPHTAAKLKFPYFWDEDCLPAPKDEL</aaseq>

Gene Sequence

<dnaseqindica>1620..1722#1135..1202#754..954#440..546#15..156#ctagaagaaaagagatggagactagaactggaccaactgccgccggcggccatggcgcccacctcgccggcgccggccgcggcgccctcctcctcgcgctcgtcgtcgtctctgccgccgccttcctccccgtagccgaatcgtcctgcccgcgaggtcgtctctccttccccgtagctctttctcctcctccccctatccatttccgagtttcttgaaacttccaggtttaatacttcgcaagattaaaaaaatctatttaaaagttacaaaatcgtagaactggcaaggtcctaggtccctcattttgagatgcgggaagtatttgatatagttgtatgcaaattagctcttgaagttttttttttctctagcaaagttctagggatttaggtatgtcagttattgcaatttctgaactgtatctagcgtatttcagacaattcgcttgtgaaagatgttagcaaaatgtaccaaagcaactatggaagggaagggttctcacatataaccattgctggtgccctagctcatggaatgaaggaggtgaggaatgaattaccatcagtactgttttccccatccagatttggcaagaacttatgcagacttcttttttcggatatacgcattataggcatagtttctgtgttgaactttattcgtaagacactgcgctgatatagatgaatactgctgtgatggatgattttttcttttcttcttgcatctacctgaaatgttttcctttaggtggaagtgtggcttcagacatttggaccagggcaaaggacgccgatccacaggcactcgtgcgaggaagtttttgtcgtcttgaaagggaaagggacactcttgctggggtcaagctcaatgaagtatccagggcagcctcaggagattcccgtctttcagaatagcacattctctgttcctgtaaatgatccgcaccaggtagagcgaatgattgtggttatattatttactgaatgtgagacctcctgatcctagtttgcacagctgtgctgaaattatgtcgcgaagcttactgagatttcattagcatgtttgatttatttggatggagtgggcaatgatgtgttagcgtttgcgacttctctttcgtggtggcaggtttggaattctgatgaacatgaggatttgcaggtgcttgtgatcatttcgcgcccacctgtcaagatgtgagtgtaatacacacagggtcctcaaaattttgtttcatccataccaaatatatttccatgtcctagtattttggacgattttccaaattctaatatttgggttacttattatgtgtatgaaccactaatacatatactctatgtaaaatggtgaccatgatatcatttaaggcctaaatacctacaagaaattggcccaggactccaggctggtttgacttaaataatgattgtctcagttttttccaaaccctggatgcacatataatcttatgccatgaaactttgaaatatattcttgtggctcacaaggatcactaaatatgctctgtatgaccttatatgcaaattaatatctttgcatcttgggtaataaatactgttctgacctttcatgatattgcttgtttgcagatttacatatgacgattggagtgtgcctcatacagcagcaaaactgaagttcccctacttctgggatgaggactgcttaccagcaccgaaggatgaactctagtttctaaaccggctattgcagtgtatcatcttcattcaagatactgctggattgcggtcgatacttgctgtaactcttttcccttctctctaatgtgcagttctaaaatgtgttctcttgcttaatgtcaggacttatgtacttagagcttttgcagtaaggaccactgtaagtgtaaactagttacataataacgcttcactaatccagacattatctgtgtatataaataaatgcctacacagctggtttcttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0529400, RefSeq:Os12g0529400