Os12g0528500

From RiceWiki
Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0528500| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001073447.1 GI:115488855 GeneID:4352393| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0528500

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001073447.1 GI:115488855 GeneID:4352393

Length

1867 bp

Definition

Oryza sativa Japonica Group Os12g0528500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21028430..21030296

Sequence Coding Region

21028430..21028901,21029049..21029224,21029627..21029905,21029955..21030296

Expression

GEO Profiles:Os12g0528500

Genome Context

<gbrowseImage1> name=NC_008405:21028430..21030296 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21028430..21030296 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccatttacagaagataaagttgatttgtctaatcttccagcagatcttgcactaagaaagccaatttcacagtataatgtgaatgttcgtgacgaggtgagaagagcttacctccaaagaggtccatttcagactccagatcataagttctcccaaaaagatatgagtgggtgtatgcgtcgttttaatccagattggtttaagacatttagtaattggttggagtacagtatagtagaagatgcatcatactgtctttgttgctatttgtttaaaaatgaaactctagggcatggtggaggagatgcattttcaactcaggggtttagaacttggaaattcgataggttcaaaattcatattggtggcccttctagtgttcataatcagaatgtgaagagatgtgatgatctcatgaaccaacaacagtctattcgatctaatattgttaagcaagaaaagaaagaatgctctacagaagtgggtgctgttgttcttaaaaatgctcccaagaacttcaaattggttgctcctgaaatccaaagagatattgtgagagcttgtgctgaggaaacacttaaagctatcatagaagatcttggagatgagtactttgctatattggttgatgagtcccgtgatgaaaaacaagcaaagatagttgaagaggcattgcaattgggtgaacttggaacaggacgtggtctaaatcaagaacttggccttaaaagagctggtgatactagatggggctctcattttaattccctgctgaatatgattgttatgtttccttcggtagttgaagttattgatgacattgcacacaatggctctaaagctgttgataggcttaaggcaaaaggggtgttggatgccatacagacatttgatttttcttttatgctgcacttaatgaaggaccaagatattgtgaaagctatttcatatctgggcacaactaagagaagactacaagacctgagaaatgatggttgggaaggtatgttcaataaggttattgacttttgcatccagcatgatattgaacttcctgacatggatgacatgcatgttcctcggggatcaaaatcaaagcggaaagctcaagttgatggcatatcaaatgaggattactaccagagtgtcatttacgctgttattgacctattacgtgttgagcttaatgaccgttttagtgagagcagcactgtgttactacttggtgtggcttgtttggatcctgctgattcattctcttaa</cdnaseq>

Protein Sequence

<aaseq>MAPFTEDKVDLSNLPADLALRKPISQYNVNVRDEVRRAYLQRGP FQTPDHKFSQKDMSGCMRRFNPDWFKTFSNWLEYSIVEDASYCLCCYLFKNETLGHGG GDAFSTQGFRTWKFDRFKIHIGGPSSVHNQNVKRCDDLMNQQQSIRSNIVKQEKKECS TEVGAVVLKNAPKNFKLVAPEIQRDIVRACAEETLKAIIEDLGDEYFAILVDESRDEK QAKIVEEALQLGELGTGRGLNQELGLKRAGDTRWGSHFNSLLNMIVMFPSVVEVIDDI AHNGSKAVDRLKAKGVLDAIQTFDFSFMLHLMKDQDIVKAISYLGTTKRRLQDLRNDG WEGMFNKVIDFCIQHDIELPDMDDMHVPRGSKSKRKAQVDGISNEDYYQSVIYAVIDL LRVELNDRFSESSTVLLLGVACLDPADSFS</aaseq>

Gene Sequence

<dnaseqindica>1..472#620..795#1198..1476#1526..1867#atggcaccatttacagaagataaagttgatttgtctaatcttccagcagatcttgcactaagaaagccaatttcacagtataatgtgaatgttcgtgacgaggtgagaagagcttacctccaaagaggtccatttcagactccagatcataagttctcccaaaaagatatgagtgggtgtatgcgtcgttttaatccagattggtttaagacatttagtaattggttggagtacagtatagtagaagatgcatcatactgtctttgttgctatttgtttaaaaatgaaactctagggcatggtggaggagatgcattttcaactcaggggtttagaacttggaaattcgataggttcaaaattcatattggtggcccttctagtgttcataatcagaatgtgaagagatgtgatgatctcatgaaccaacaacagtctattcgatctaatattgttaagcaagaaaagaaaggtaagatggagtacatgattagtttaacagcatccattgatattgcaagattgcttctgactttgggtttgccatttagagatcatgatgaaagtgaatcttctaagaggaagggaaatttccttactttttattaatggtatgcagaatgctctacagaagtgggtgctgttgttcttaaaaatgctcccaagaacttcaaattggttgctcctgaaatccaaagagatattgtgagagcttgtgctgaggaaacacttaaagctatcatagaagatcttggagatgagtactttgctatattggttgatgagtcccgtgatgtatcacacaaggaataaatggctcttgttatacgatatgttgatagaagggggtttctggtggagcggcttattgggcttgctcatgttactcaaacaactgctattgcgctaaaggaagttgtttattttgttcttggaaataattcacttagtccctctcgaatccgtggccaaggttatgacggagcaagtaatatgcaagggcatctaaatggtttgaaaactttaatcatgcaagattctatatctgctcatagcatacattgttttgctcatcaactccaattgacactagttgcagttgccaaaaatcatgaagatgttgtgtttctttttgagtggcttaatgttatattggccactattggaggttcattcaagaacagggatatgctttaggaaaaacaagcaaagatagttgaagaggcattgcaattgggtgaacttggaacaggacgtggtctaaatcaagaacttggccttaaaagagctggtgatactagatggggctctcattttaattccctgctgaatatgattgttatgtttccttcggtagttgaagttattgatgacattgcacacaatggctctaaagctgttgataggcttaaggcaaaaggggtgttggatgccatacagacatttgatttttcttttatgctgcacttaatgaaggttatacttggaataactaatgatttgaacatagccttgcaaaaaaaaggaccaagatattgtgaaagctatttcatatctgggcacaactaagagaagactacaagacctgagaaatgatggttgggaaggtatgttcaataaggttattgacttttgcatccagcatgatattgaacttcctgacatggatgacatgcatgttcctcggggatcaaaatcaaagcggaaagctcaagttgatggcatatcaaatgaggattactaccagagtgtcatttacgctgttattgacctattacgtgttgagcttaatgaccgttttagtgagagcagcactgtgttactacttggtgtggcttgtttggatcctgctgattcattctcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0528500, RefSeq:Os12g0528500