Os12g0528300

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0528300| Description = Clathrin adaptor complex, medium chain family protein| Version = NM_001073445.1 GI:115488851 GeneID:4352391| Length ...")
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Gene Name

Os12g0528300

Description

Clathrin adaptor complex, medium chain family protein

Version

NM_001073445.1 GI:115488851 GeneID:4352391

Length

4979 bp

Definition

Oryza sativa Japonica Group Os12g0528300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21040382..21045360

Sequence Coding Region

21042453..21042569,21042850..21043745,21043855..21044138,21044288..21044304

Expression

GEO Profiles:Os12g0528300

Genome Context

<gbrowseImage1> name=NC_008405:21040382..21045360 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21040382..21045360 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcataacagggtaatggcattaatggttgcacatgttattggggacataattactggtgataccgctgagcctgaggtgatcgttagtactggcccctctgttggtgggctgttagattcattgacaggaagtataggtatttctgctcgaccaaaacctattgctgcacctgtcgcagccccgaccgcatcaatttcttcacctgttggtgctcctcagtcggagtctctgaaaggtggtatgaggccttttgacaaggatttactacggaatttcatccttggtgcgatgccttttggaacacctcaggatcttaattatgccaatgttacttcggtaagaacaactgggttttccgctgatcctctacctacagaccagaagcagcctgcctggaaaccttatctgtacaaagggagacaaaggactctcttctcaagcctagagactttaaatgctgcactatatgaccgtgatgatgtgcaagatttcctttcggtttctggacaagtgacatgtagggctgagctagaaggtttacctgatgtttctttgccattgtctgggttaaaagctgctcgtgtggaggtttcatcgttccatcactgtgtgcaagcttcagagcctaccaatgataagcaaactctaatatttcaaccaccactaggaaattttgttttgatgcactatcaagcttcatgcaacatggacccacctgttaaaggtttctaccagttgtctatggtgtctgagaatgaaggtgcttttctatttaagctgagattgatggagggttacaaatctccctttcttatggaattttgcatggttacaatgccgtttcctcgaagacgagttgcatcatatgatggaaatccatctgttgggacagtttcaatgacagaacattcaattgaatggagaatcgtttcaagcggtcggggcctcagtggaaggagcattgaggctaccttctctggtactgttagattccatcctataacaatccagcgagtaaattcatcatttcgatcagttccaagcactgcatttgttgaagatagtgatagtgaacaagacaatactaagaatggtgccaatttggatgactacctcatggaaaaaatgaataaggaccttcaagcagttaacttggaagagccattgtcctggcaagcttataattatgctaaggtttcttttaagattgttgggggcaccctttctggtctaacaattgatccaaaatctgtaagttattcattaactttcttgttccattctgatggtttatgctttgacctcaattaa</cdnaseq>

Protein Sequence

<aaseq>MHNRVMALMVAHVIGDIITGDTAEPEVIVSTGPSVGGLLDSLTG SIGISARPKPIAAPVAAPTASISSPVGAPQSESLKGGMRPFDKDLLRNFILGAMPFGT PQDLNYANVTSVRTTGFSADPLPTDQKQPAWKPYLYKGRQRTLFSSLETLNAALYDRD DVQDFLSVSGQVTCRAELEGLPDVSLPLSGLKAARVEVSSFHHCVQASEPTNDKQTLI FQPPLGNFVLMHYQASCNMDPPVKGFYQLSMVSENEGAFLFKLRLMEGYKSPFLMEFC MVTMPFPRRRVASYDGNPSVGTVSMTEHSIEWRIVSSGRGLSGRSIEATFSGTVRFHP ITIQRVNSSFRSVPSTAFVEDSDSEQDNTKNGANLDDYLMEKMNKDLQAVNLEEPLSW QAYNYAKVSFKIVGGTLSGLTIDPKSVSYSLTFLFHSDGLCFDLN</aaseq>

Gene Sequence

<dnaseqindica>2792..2908#1616..2511#1223..1506#1057..1073#gcctatcgtcttcttccccactggccgtctctccccgcaccaccattcgcgcacgaccgccgcggcggcagccaactccggcgagggccatgtccggcggcggatgcagcgtccgggcgatctggatcctcaccccgcacgacgccgtcgccttctccaggtgcagcttcgagtcctccctgctcaaacccttgtggggaagagagcgaaaaaaaaaattcgagcatctcgcggcaagatttggtcctttccgatcccaatagctaacgtttttttccttccccttcttgtggtaggcgatttgcggtggtggagaagcggtggcgggtcgcgtgggaggcggagggcggggcgagggcggagatgatgccgctgccggctgactacgaggtcgccgccgccttcgccgaacgccggagaaggttttgcctccttttttttctctctctcactcccttggattgtgctttggtgaattgatctggatattactaagttaatccatgcgtggaagtggatttaggcgttaggatttgatattagtggtggtaggaattatatataagccatacaacaatgttaagtgaacaaaccccatctgaagcttcgcagttgaataatatatcgagcgcaacaaacttgacatgctgcctgtactgttatagttcatgttgttgactagtgatgatttagaaacatagctgtataaactcatgttaggaacagtggtgatacgctcttgaatatggcattgtgcagggaaggcacggcgcgtggttctggaatccgtacgagcatgtcatctgctgggtcggattcgtgggttgatgatccaatcactcgccacattatatcactccatattgataaagaggaaggagaggggtttatgctgtggcctgtggttcttcagaagcggggtagctattatatccttgtgttgcctttggtggatcctcaatcatttaaagcatatgaaagcctcttgaaaaggtcggactgcgggagttctgccaaggagaagggcaatctttcttccattctgctcaaccttccatgcataacagggtaatgtaagtttgcctacctatcatgttgtctgagtctcaccatctttccgagattacatggaaatgtttttgtcagtgctatactgctaaagtcatcaaccaatttatgggtgttcatggcttgcactcttacacttcattttccatggcagggcattaatggttgcacatgttattggggacataattactggtgataccgctgagcctgaggtgatcgttagtactggcccctctgttggtgggctgttagattcattgacaggaagtataggtatttctgctcgaccaaaacctattgctgcacctgtcgcagccccgaccgcatcaatttcttcacctgttggtgctcctcagtcggagtctctgaaaggtggtatgaggccttttgacaaggatttactacggaatttcatccttggtgcgatgccttttggttagtatcaacatagccttctatcatggagctaacatactatgctcatcaatttctttttggatctgtttatgcatttgccaacttagctagcaataaaatttgacaggaacacctcaggatcttaattatgccaatgttacttcggtaagaacaactgggttttccgctgatcctctacctacagaccagaagcagcctgcctggaaaccttatctgtacaaagggagacaaaggactctcttctcaagcctagagactttaaatgctgcactatatgaccgtgatgatgtgcaagatttcctttcggtttctggacaagtgacatgtagggctgagctagaaggtttacctgatgtttctttgccattgtctgggttaaaagctgctcgtgtggaggtttcatcgttccatcactgtgtgcaagcttcagagcctaccaatgataagcaaactctaatatttcaaccaccactaggaaattttgttttgatgcactatcaagcttcatgcaacatggacccacctgttaaaggtttctaccagttgtctatggtgtctgagaatgaaggtgcttttctatttaagctgagattgatggagggttacaaatctccctttcttatggaattttgcatggttacaatgccgtttcctcgaagacgagttgcatcatatgatggaaatccatctgttgggacagtttcaatgacagaacattcaattgaatggagaatcgtttcaagcggtcggggcctcagtggaaggagcattgaggctaccttctctggtactgttagattccatcctataacaatccagcgagtaaattcatcatttcgatcagttccaagcactgcatttgttgaagatagtgatagtgaacaagacaatactaagaatggtgccaatttggatgactacctcatggaaaaaatgaataaggaccttcaagcagttaacttggaagagccattgtcctggcaagcttataattatgctaaggtcagtctatgccaaaccaggatatttactggcacatgcaaatctatcttatcattttttttccccaaatatcagatcactagggtccatatctggtcataccttattgacatgcttaatgactaatggccatattgctttcactttagcgcattattttgatagttcatatatgatcctgtaggaagtctgtcagtatcagtacagcatactcctgtactttgattcttgtttaggattctttccttactttttaattggttatgaaacattttgccaggtttcttttaagattgttgggggcaccctttctggtctaacaattgatccaaaatctgtaagttattcattaactttcttgttccattctgatggtttatgctttgacctcaattaatcagttgaatagttatgcattaccatcccatggttgatcatttgatctgcaaatctgatgcacaaactatgtcgatattgagtgactgatgtttagtgttttcattgggtgaagaaaaatgtcagacaaatattaccaatttaccatgtcactgtcacacagggtgcattcagtcccttcccattgaaaaactcagtagctaggttgagatgttgtggtgcttgctcgagttttacctactgtgttatcagttatgaaaaggcagaatatttgtccatgtgtccatggatttaggaagcataccaggctgatggtatgttggtaacctctggtgccaacaattatgctaatgtttcattacttccctgcttaaagaggattactctaaaatttctccttccaatgtcttgaactcttgatcactattcttgaattcttcttttgtcactgtggtgatttggacatttggtataaagttaattgcattggctgtgttaaaaggaactcctattctttattcaaatatggaccatgatcataaatttgtactttccttttttgctactttaaagtttaacggccttctgcaggtaaccatttatccttctgtcaaagccccagttgaatactcaatgcaggtgatcctttgatctcattaactataacttttgttcttttaaatattccatccactagcaaggtagttgcttttacaacattccaaagtacctagtacctggtattgtgcacggttaaatagatgaccctgttttattagtacttgcaaatgatgcacacttcgatctgcgatatgaagcagtttcccagcttctttacaaaatcagctgtttataaagggaatgtctccattttgatcaaggagaaggtggtttttcaaacttaatttgaagaacaatctgataacagctgaaagcaacatggcaatgagagatcatcttgcctctgtgaacattagttactgtagaaaaggcacaaaaatcgcttcaacttggtctgctcgttctctaaatgataattaatgcttaatctcctgctcctgctgcacatctgtattctgtacccttgatactggtttaatggattcttcttctgaaggaagtagcttgatctatgcagcctgatattcatgacatgattaataactaatgggcaataccgacacaaaaaatctgactcattaataaaatgcttgcctcctgtccaaatataaacttgcccttggatttgcttatatttcatagtaatctgttgtgacttccagcgttgggatggaatatagtatttaattttgataactaaattgttgacactttcttgtacaggcttcatctggagattacatactctggaacactttaggaaaatgtccttctgctgctttgcctaaataattatgaataccgatggatgttcatcaccggacatattcatgggcgcgtgttctttgccgtacagaacctacagtatggttccccaattgatctctactcacatcaccagacctatgctcaaagtttttgaattttgttcaggagttattgtttcaagggaaaaaaaggaacccaacaattctggatatatctatgtcagactctggtattctaaacttgagttcatgattgggtgcaataccgttttcgagaaaaaaattgattgggtgcaatattgaagccatgaccttattgggcaataaaattccatttcgtaggattactagcagcatgttgagataacttccatgtcaggaaatatggtactatatcagcaagaaaaaaccaactcattgtccacaaacatgagacttggcatgataaatctgtatgattactggtgattgagcccaaacaggtcccaattttctgggcctccttctctaggttgttagatagagatgtttcatctttatttattttgtcagtccttgacagaggaatgtcatgttgaaggtccattgaaccgagacattttcttttgctaatgtcatgcatgatgccattgagatagatgatgtaatattcggattgcattgaaaggaataacatgaccggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0528300, RefSeq:Os12g0528300