Os12g0541000

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0541000| Description = Lumazine-binding protein family protein| Version = NM_001073484.2 GI:297613309 GeneID:4352436| Length = 2004 bp| De...")
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Gene Name

Os12g0541000

Description

Lumazine-binding protein family protein

Version

NM_001073484.2 GI:297613309 GeneID:4352436

Length

2004 bp

Definition

Oryza sativa Japonica Group Os12g0541000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21840890..21842893

Sequence Coding Region

21840892..21841770,21842499..21842519

Expression

GEO Profiles:Os12g0541000

Genome Context

<gbrowseImage1> name=NC_008405:21840890..21842893 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21840890..21842893 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaccgccgccgccgccaccgccaccgccatggccgccggcgttctcccccgaccgcgcccgcacttcctccgccgcggcatcctcccctcgccggcctccccgctccccttcgcttcccgggtctcctccgctgcgcccctccgccaccgcctcccgccgccgcgcttctccctctccccgatccccaagaccctctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcggcaccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccccggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacagcgtggccgtcgacggggcctgcctcaccgtcgcggccatcgacgcggcggcgtcgacgctcaccttcggcgtcgcgccggagacactccgccggacgtccctcggcggccggtccgccggcgacgccgtgaacctggagcgcgcgctcacgccggcgtcgcgcatggggggccacttcgtgcagggccacgtggacgggacgggggagatcgccgcgttccgggccgagggggactcgctctgggtcaccgtgcgcgcgccgccggagatcctgcggctgctggtgtccaagggcttcgtcgccgtcgacggcgcgagcctcaccgtggtgaacgtcgacgaggaaggcgggtggttcgacttcatgctggtgaggtacacccaggacaacatcgtgctgccgaacaagaaggttggggacaaggtgaacctcgaggccgacatactcggcaagtacgtcgagaagctcctcgccgggagattggaggcgatgtcgaaggcaggaaagagaagggaatga</cdnaseq>

Protein Sequence

<aaseq>MTTAAAATATAMAAGVLPRPRPHFLRRGILPSPASPLPFASRVS SAAPLRHRLPPPRFSLSPIPKTLSSPSHVPVRSLFTGIVEDVGTVRRIGPPPAPPSGG GGEAPGVDLEVETSTLLAGTQLGDSVAVDGACLTVAAIDAAASTLTFGVAPETLRRTS LGGRSAGDAVNLERALTPASRMGGHFVQGHVDGTGEIAAFRAEGDSLWVTVRAPPEIL RLLVSKGFVAVDGASLTVVNVDEEGGWFDFMLVRYTQDNIVLPNKKVGDKVNLEADIL GKYVEKLLAGRLEAMSKAGKRRE</aaseq>

Gene Sequence

<dnaseqindica>3..881#1610..1630#cgatgacgaccgccgccgccgccaccgccaccgccatggccgccggcgttctcccccgaccgcgcccgcacttcctccgccgcggcatcctcccctcgccggcctccccgctccccttcgcttcccgggtctcctccgctgcgcccctccgccaccgcctcccgccgccgcgcttctccctctccccgatccccaagaccctctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcggcaccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccccggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacagcgtggccgtcgacggggcctgcctcaccgtcgcggccatcgacgcggcggcgtcgacgctcaccttcggcgtcgcgccggagacactccgccggacgtccctcggcggccggtccgccggcgacgccgtgaacctggagcgcgcgctcacgccggcgtcgcgcatggggggccacttcgtgcagggccacgtggacgggacgggggagatcgccgcgttccgggccgagggggactcgctctgggtcaccgtgcgcgcgccgccggagatcctgcggctgctggtgtccaagggcttcgtcgccgtcgacggcgcgagcctcaccgtggtgaacgtcgacgaggaaggcgggtggttcgacttcatgctggtgaggtacacccaggacaacatcgtgctgccgaacaagaaggttggggacaaggtgaacctcgaggccgacatactcggcaagtacgtcgagaagctcctcgccgggagattggaggcgatgtcgaaggtgtgaatttgccatttgttgagctggaagaagcactgctcttcattccttttcggtataaataaggcgcaatctaatgttcatcagtaatggcagattctgtatttctcctttctgtatatgttgattgagatgcatatttagttatttatgatcaattgatttcggtgacgctaccttattcatattgtttcatagtcattgaatactttttgcttgctgcggagtaaagtgcttggtgtgatggtgtcttatcttggttggattggtctagtagttcactggttctagttcatcctcgcgctacttaaaagttagtgtttgatcagtgccatgtcatttgtcatgtctgttaattgttcaagaggtagtagcctggttataactatctccaatttattggttccatgcaatgtcgtaattcttgaaagaactggtatcaattttaggtggtagtagcgtgattttctgctgccatatatgaacatttccaatttctggaatagatcgtgatgtagggtgtgttggtagttgtggtatctgtttgcgcagttgtatgtacggttatctgttcttgatgggcttggcatcttggggaaacaggccacactaatggaagtagaatcagcaaaccttcaccagattgatctacatgttaccttttcgttgtgtttttcctgtatatttgatactctgtaattgatatacccgtgctttgcattgtgcaggcaggaaagagaagggaatgaaagcggatcctgatccactgcttcctttgcggaatcgttctggagccaggagcaaggaagataaaaagagaggctcttttcagacttgcatagctccattgcatcgacgaaaaattataccaacagtgttcttgtaataacgcagcttgtaagttgtaagcttgcctttccattgcctctgttgaacgaagcggagacagttgaagagttccatatgataattcagagttataaagtttttgacattgtgtaaatttggtgttgcttctgctgctgctcgtgtaattctggtggctgcttagcttgttgctgaaggctgtgtttagttgaggggaaagtttggattttggttgaaattaaagatgatgtgactg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0541000, RefSeq:Os12g0541000