Os12g0541900

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0541900| Description = Rapid ALkalinization Factor family protein| Version = NM_001190068.1 GI:297729266 GeneID:9267077| Length = 996 bp| ...")
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Gene Name

Os12g0541900

Description

Rapid ALkalinization Factor family protein

Version

NM_001190068.1 GI:297729266 GeneID:9267077

Length

996 bp

Definition

Oryza sativa Japonica Group Os12g0541900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21903687..21904682

Sequence Coding Region

21903748..21904146

Expression

GEO Profiles:Os12g0541900

Genome Context

<gbrowseImage1> name=NC_008405:21903687..21904682 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21903687..21904682 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccgccgccgctgtaaggtccgtggcgatctcgctcttcgtcgtcgccctcgccgtggcagcgttcgcctggtccccgtcgtcgctggcgggcggcgccagccaccacctgcggctggaggaggtggccagcgccgccggcgccggcgcggcggggcatggcagcatgtcggcggccgccgggaaggacggtggcgccagcgcggcggcgcatggtagcgcgccggcggccgccgggatagacaagaacgggtacctcagcttcttcgccgccatgcgccgcgacagcgtgccgtgcacccgcaaaggcgccagctactacaactgcgtccccggcgcgccgcccagcccgtacaaccgcagctgcgagcacatcacccgctgccacggctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAVRSVAISLFVVALAVAAFAWSPSSLAGGASHHLRLEEV ASAAGAGAAGHGSMSAAAGKDGGASAAAHGSAPAAAGIDKNGYLSFFAAMRRDSVPCT RKGASYYNCVPGAPPSPYNRSCEHITRCHG</aaseq>

Gene Sequence

<dnaseqindica>62..460#gatcgcctccgctgccaccctccaccattctcattcccccacccctcccccctcgcgagccatggctgccgccgccgctgtaaggtccgtggcgatctcgctcttcgtcgtcgccctcgccgtggcagcgttcgcctggtccccgtcgtcgctggcgggcggcgccagccaccacctgcggctggaggaggtggccagcgccgccggcgccggcgcggcggggcatggcagcatgtcggcggccgccgggaaggacggtggcgccagcgcggcggcgcatggtagcgcgccggcggccgccgggatagacaagaacgggtacctcagcttcttcgccgccatgcgccgcgacagcgtgccgtgcacccgcaaaggcgccagctactacaactgcgtccccggcgcgccgcccagcccgtacaaccgcagctgcgagcacatcacccgctgccacggctgatcgatcacaccatcgcccctcctcctcctccgccgccgccgccgccgccgctgccggtgccggcgccggcgatgatgattcgctttgtttctttgacgacgacgacgatgtgcacgcatatgcatatgcgtgctagcgttttgtcgatggatcgatcgatcaccaggttaattaaataaaaatgacatgaaataaggtgtgtgtgtgtttgttctcgtgttgttgccgtgccactgcgttctcttattattatccatgtctactgtctcattgtattagctactactgttgtccatttgtttcttttgattaattaatttgctgctaatgatgcagctattgtatttgggatttttgtccctgtaaggttttgtttgtttaatcccttctacaagaggatcgagggggatttggacaggacttatttcacaactattgtatggtgtggaattattctccttcaatcccctccattctccttttcttgaggattaaatgaacaaggtctaaattaagccgatttcatcttgttgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0541900, RefSeq:Os12g0541900