Os12g0542200
| Gene Name |
Os12g0542200 |
|---|---|
| Description |
Similar to Extensin-like protein |
| Version |
NM_001073492.1 GI:115488945 GeneID:4352446 |
| Length |
2288 bp |
| Definition |
Oryza sativa Japonica Group Os12g0542200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:21915257..21917544 |
| Sequence Coding Region |
21915257..21916159,21916165..21917544 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:21915257..21917544 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:21915257..21917544 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggccgccgccgccgccgcgcgccgcctcgccgtggccgccgccgccgtcgccctgctcgcggtgaccgtggtcaccgccgcggcgctctccgacgccgaggcgtcgtacatcgcggggcggcagctgctgtccctcaaggagggcggcggcaacggcgagctccccgacgacttcgagttcgacatccacgtcgacgtcaccttcgccaacgaccgcctccgccgcgcctacgtcggcctgcaggcgctccggcaggcgatctactccgaccccaagaacttcaccggcggctgggtcggcgccgatgtctgctcctacttcggcatcacgtgcgcggcggcgctcgacgacccggccgtcaccgtcgtcgccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcggcctcatgaccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcgtcatccccaagagcttctcgcggctggcgctgctgcacgagctcgacgtcagcaacaaccgcctcgtcggcgggttcccggaggtggtgctcgacatggccgtgctcaagtacctcgacatcaggttcaacgacttcgagggcgagctgccgccgcagctgttcgacaagggcctcgacgccatcttcctcaacagcaaccgcttcgtcggacgcatcccggacagcatcggcggctcgacggcgacggtggtggtgctcgccaacaaccacttcgtcggctgcatcccgcgcagcgtcgggcggatgaaggggacgctcaacgagctcctgctcctcaacaaccgccttgacgggtgcatcccgccggagatcggcgagctcgccgacgccgaggtggtggacgtcggcgggaacatgctcgtcggcttgctgccggaggagctcgccaagatgggcaagctcgagcagctcgacgtgtcgaggaacctgctcgccggcgccgtgccggagcccgtctgcaagctcccgtcgctcgccaacttcagcttcgcgtacaactacttcagcgtggagccgccagcgtgcgtcccggcggagaccgccatggtcgagctcgacgacaagggcaactgcctcggcggcgggcgaccggagcagaagacgtcgctcgagtgcgcgcccctgctcaagcgccccatcgactgccggacgaacacctgctcggcgctgccgtcgtcgtcgaagccggctccgaagaagattacacccacgccgcccactctggcgcctccgccgttgatcagcccaaaggaggagacaccgtcaccatcaccatacatagagcctcctaagagctcacctccaccggtcaaattcccgctgccaccggtaccactatcctcctccaccagtgaaatccccaccaccaccggcaccagtgagctctccaccgccagcaccggtgagctcccctcccccaccgttaaaatccccaccaccgcctgcaccggtgagctctccacccccaccagtcaaatcccctccaccgccagcacccgtgagctctccaccgccaccggtaaaatcccctccaccccccgcaccaatccactctccaccgccaccagtaaaatcccctccaccccccgcaccagtctactctcctcctccactagtaagatcccctccacccccagcacctgtgagctctccaccgccaccggtaaaatcccctccaccacctgcaccagtccactctccaccgccaccggtaaaacctcctccacccccagcaccagtccactctccacctccaccagtaaaacctcctccacccccagcaccagtccactctcctcctccaccattaaaatccccaccaccgcccgcaccggtgagctctccacccccactgataaaatccccaccaccacccgcgccggtgatctctccaccgccaccagtaaaattcccaccgcccccggcaccagtgagctctccaccaccaccagtaaaatctcctccacctcctgcgccggtcagttctccacctccacctatggaatccccaccaccacctgcaccagtaagctcaccgcctcctcctgtaaagtctcctcccccaccggcgcctgtaagttctccacctccaccagtacattcacccccacctccttctccaatgatctcaccgcctccaccagtacattccccaccaccacccgtcttatccccaccgccaccagtcgtcccatcgcctccgccaccggcaccatcgttgcctcctccagcccctga</cdnaseq> |
| Protein Sequence |
<aaseq>MEAAAAAARRLAVAAAAVALLAVTVVTAAALSDAEASYIAGRQL LSLKEGGGNGELPDDFEFDIHVDVTFANDRLRRAYVGLQALRQAIYSDPKNFTGGWVG ADVCSYFGITCAAALDDPAVTVVAGVDLNGGDIAGYLPAELGLMTDLALFHVNSNRFC GVIPKSFSRLALLHELDVSNNRLVGGFPEVVLDMAVLKYLDIRFNDFEGELPPQLFDK GLDAIFLNSNRFVGRIPDSIGGSTATVVVLANNHFVGCIPRSVGRMKGTLNELLLLNN RLDGCIPPEIGELADAEVVDVGGNMLVGLLPEELAKMGKLEQLDVSRNLLAGAVPEPV CKLPSLANFSFAYNYFSVEPPACVPAETAMVELDDKGNCLGGGRPEQKTSLECAPLLK RPIDCRTNTCSALPSSSKPAPKKITPTPPTLAPPPLISPKEETPSPSPYIEPPKSSPP PVKFPLPPVPLSSSTSEIPTTTGTSELSTASTGELPSPTVKIPTTACTGELSTPTSQI PSTASTRELSTATGKIPSTPRTNPLSTATSKIPSTPRTSLLSSSTSKIPSTPSTCELS TATGKIPSTTCTSPLSTATGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTA RTGELSTPTDKIPTTTRAGDLSTATSKIPTAPGTSELSTTTSKISSTSCAGQFSTSTY GIPTTTCTSKLTASSCKVSSPTGACKFSTSTSTFTPTSFSNDLTASTSTFPTTTRLIP TATSRPIASATGTIVASSSP</aaseq> |
| Gene Sequence |
<dnaseqindica>1386..2288#1..1380#atggaggccgccgccgccgccgcgcgccgcctcgccgtggccgccgccgccgtcgccctgctcgcggtgaccgtggtcaccgccgcggcgctctccgacgccgaggcgtcgtacatcgcggggcggcagctgctgtccctcaaggagggcggcggcaacggcgagctccccgacgacttcgagttcgacatccacgtcgacgtcaccttcgccaacgaccgcctccgccgcgcctacgtcggcctgcaggcgctccggcaggcgatctactccgaccccaagaacttcaccggcggctgggtcggcgccgatgtctgctcctacttcggcatcacgtgcgcggcggcgctcgacgacccggccgtcaccgtcgtcgccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcggcctcatgaccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcgtcatccccaagagcttctcgcggctggcgctgctgcacgagctcgacgtcagcaacaaccgcctcgtcggcgggttcccggaggtggtgctcgacatggccgtgctcaagtacctcgacatcaggttcaacgacttcgagggcgagctgccgccgcagctgttcgacaagggcctcgacgccatcttcctcaacagcaaccgcttcgtcggacgcatcccggacagcatcggcggctcgacggcgacggtggtggtgctcgccaacaaccacttcgtcggctgcatcccgcgcagcgtcgggcggatgaaggggacgctcaacgagctcctgctcctcaacaaccgccttgacgggtgcatcccgccggagatcggcgagctcgccgacgccgaggtggtggacgtcggcgggaacatgctcgtcggcttgctgccggaggagctcgccaagatgggcaagctcgagcagctcgacgtgtcgaggaacctgctcgccggcgccgtgccggagcccgtctgcaagctcccgtcgctcgccaacttcagcttcgcgtacaactacttcagcgtggagccgccagcgtgcgtcccggcggagaccgccatggtcgagctcgacgacaagggcaactgcctcggcggcgggcgaccggagcagaagacgtcgctcgagtgcgcgcccctgctcaagcgccccatcgactgccggacgaacacctgctcggcgctgccgtcgtcgtcgaagccggctccgaagaagattacacccacgccgcccactctggcgcctccgccgttgatcagcccaaaggaggagacaccgtcaccatcaccatacatagagcctcctaagagctcacctccaccggtcaaattcccgctgccaccggtaccagtgagctatcctcctccaccagtgaaatccccaccaccaccggcaccagtgagctctccaccgccagcaccggtgagctcccctcccccaccgttaaaatccccaccaccgcctgcaccggtgagctctccacccccaccagtcaaatcccctccaccgccagcacccgtgagctctccaccgccaccggtaaaatcccctccaccccccgcaccaatccactctccaccgccaccagtaaaatcccctccaccccccgcaccagtctactctcctcctccactagtaagatcccctccacccccagcacctgtgagctctccaccgccaccggtaaaatcccctccaccacctgcaccagtccactctccaccgccaccggtaaaacctcctccacccccagcaccagtccactctccacctccaccagtaaaacctcctccacccccagcaccagtccactctcctcctccaccattaaaatccccaccaccgcccgcaccggtgagctctccacccccactgataaaatccccaccaccacccgcgccggtgatctctccaccgccaccagtaaaattcccaccgcccccggcaccagtgagctctccaccaccaccagtaaaatctcctccacctcctgcgccggtcagttctccacctccacctatggaatccccaccaccacctgcaccagtaagctcaccgcctcctcctgtaaagtctcctcccccaccggcgcctgtaagttctccacctccaccagtacattcacccccacctccttctccaatgatctcaccgcctccaccagtacattccccaccaccacccgtcttatccccaccgccaccagtcgtcccatcgcctccgccaccggcaccatcgttgcctcctccagcccctga</dnaseqindica> |
| External Link(s) |
