Os12g0552800

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0552800| Description = Conserved hypothetical protein| Version = NM_001073517.1 GI:115488995 GeneID:4352474| Length = 2913 bp| Definition ...")
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Gene Name

Os12g0552800

Description

Conserved hypothetical protein

Version

NM_001073517.1 GI:115488995 GeneID:4352474

Length

2913 bp

Definition

Oryza sativa Japonica Group Os12g0552800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22670048..22672960

Sequence Coding Region

22670181..22670440,22670551..22670596,22670716..22670790,22670891..22670977,22671122..22671193
,22671312..22671383,22671493..22671564,22671689..22672555

Expression

GEO Profiles:Os12g0552800

Genome Context

<gbrowseImage1> name=NC_008405:22670048..22672960 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22670048..22672960 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagtggtggtggtggtggtgatcttggtgtggcgcgagaggtgagagaggaggagagaggtggcggcggcggcgggatgaggaaggcgcgcgtgtgcgtccgcgcgccgcacggcgccggcgcgctgctcgtcgtcggcggcgcggtcgtcggcgccgccgtcttcgcgtggtgccgccgccgctgccgaagtgacggcggcgagggcgagggcgagcgcaaggagggcgccaagaaccacggcgagcatccagcaaaggaggagggtggtttggatggcggagttgtcgagggcgagcagggggacgcgcagaggcttcatcaaatttatcagaatctgagcagggacaacgtcgaggttggagtcaatggatcggatggcaaggcaacagatgaactttatcagattcagaaggatgatgaggtcgttccgaatggtgataagatcgttctgtctgaattggttactgaagctgtggagaaatatgatcacggttcaatcaaggactgtgcggagatcgccccggatggcatggttaatgaagctgttgagacatataatcacaattcagagagggactgcgctgagatcactgcacatgttatggacacagaaaatgtgacagaggatgatgataattcaggcaaaaatgatgccgagaatgagataattgtaaatgaaaatgaaggtgaagaaaattctgcggaaaacacttttagcctcagcagccctgacatcacccttgaggaacatgacaacaacaactgtgttgatcaagatactgcatcaacagagacaacaccaactacagagaaggtgatgcatcaagaacaagtctcagagcaggtgaagatggcagaaacagcagaagtgaaaccggcagaagaaacagaaaccacaccaatggttcaaacagaagtgaaactggaagaggaaacggagaccacaccagttgctgaaacaacagaagtgaagccggcagaagaaacagagacctcaacagtggctgaaactttacaggtgaaaccagccgaagaaacggataccacatccatggctgaaacagcagaactgaagctggcagaagaaacagagactgcatcaatggctgaaacagcagaagtgaaactcgcagaagaaacagagaccataccaatggcagaaacagcagaagtgaaactagcagaagaaaaagtcatgaagaaaaatgagtttgaacatgaggaagagaattctaaggaagaatatgttaaaccggtcaattcactggcatattcctcagtgccatctctgcttaagcgaacggtgaagaaagggcaggtgaatcctagatggaatgagacagggatgaagctagagcaagattgcaccaacggtgagctgaatgagcatgacctgaccaaagcaggagctaccgcaatgggaggagctgttttgaccatggctcgtaggcctgattctatggccattcttgctcttatagttgcagttaccatcgcgataactatcgtcgtgcgcctatatgttcctctgcaagcaacatga</cdnaseq>

Protein Sequence

<aaseq>MGSGGGGGDLGVAREVREEERGGGGGGMRKARVCVRAPHGAGAL LVVGGAVVGAAVFAWCRRRCRSDGGEGEGERKEGAKNHGEHPAKEEGGLDGGVVEGEQ GDAQRLHQIYQNLSRDNVEVGVNGSDGKATDELYQIQKDDEVVPNGDKIVLSELVTEA VEKYDHGSIKDCAEIAPDGMVNEAVETYNHNSERDCAEITAHVMDTENVTEDDDNSGK NDAENEIIVNENEGEENSAENTFSLSSPDITLEEHDNNNCVDQDTASTETTPTTEKVM HQEQVSEQVKMAETAEVKPAEETETTPMVQTEVKLEEETETTPVAETTEVKPAEETET STVAETLQVKPAEETDTTSMAETAELKLAEETETASMAETAEVKLAEETETIPMAETA EVKLAEEKVMKKNEFEHEEENSKEEYVKPVNSLAYSSVPSLLKRTVKKGQVNPRWNET GMKLEQDCTNGELNEHDLTKAGATAMGGAVLTMARRPDSMAILALIVAVTIAITIVVR LYVPLQAT</aaseq>

Gene Sequence

<dnaseqindica>134..393#504..549#669..743#844..930#1075..1146#1265..1336#1446..1517#1642..2508#attctctctccttctctctctctctctctctagaacgcgcgcaagaacacgcgcgaggactccccccaaacccccacttaattgcgcgcgaatggagtaatactagtactagtataatcattaattggtgtttatgggaagtggtggtggtggtggtgatcttggtgtggcgcgagaggtgagagaggaggagagaggtggcggcggcggcgggatgaggaaggcgcgcgtgtgcgtccgcgcgccgcacggcgccggcgcgctgctcgtcgtcggcggcgcggtcgtcggcgccgccgtcttcgcgtggtgccgccgccgctgccgaagtgacggcggcgagggcgagggcgagcgcaaggagggcgccaagaaccacggcgagcatccagcgtacgtgtttttctttttctcattttcttgatttggatggatggaagaagatgaagagattggatcttaatctttatttttgttcttgtttttggtggatttttttgcagaaaggaggagggtggtttggatggcggagttgtcgagggcgagcaggttaggtgcttcattagtttagctgccttgttctttcacctttgtcatgtgaaaattgaaattattctccttggtgtttttttttgaccctgtcgtttgattcaaacttgtggattcagggggacgcgcagaggcttcatcaaatttatcagaatctgagcagggacaacgtcgaggttggagtcaatggatcggtcagttgatctaatttgttaaaaatttcagtgtgcatgcatttatgtgtggtgttctagtgatctgatacgtgtgcaaattcatctgggtttctttcaggatggcaaggcaacagatgaactttatcagattcagaaggatgatgaggtcgttccgaatggtgataagatcgttctgtctgaattggtttgtctctctctctctttttgccaggatttggtttgtttctcaatgtaaatctttggaacgattgcaggagtcaaaatgcgtgggagcactgttgtaggttctttacaattctgtcttttgctcttgtgtttcgggtttcaggttactgaagctgtggagaaatatgatcacggttcaatcaaggactgtgcggagatcgccccggatggcatggttagttttgttgcaaccatgaaaccatttagctttgagcagcatgtttgattttctagggaccttttgcacttttgctctgtaaattcatattccttatgccaattttgggtctaaggttaatgaagctgttgagacatataatcacaattcagagagggactgcgctgagatcactgcacatgttatggtgagtgttgttgcaaccatgtaaaacattttgctatagaaagcatgccattttctaggagccctattgcacttcttgttctgtaacttcatttttgttttcgcttcaggacacagaaaatgtgacagaggatgatgataattcaggcaaaaatgatgccgagaatgagataattgtaaatgtactgtcttcctactacaactctttaacatttgtggaaatctgcttcctgtgatcatccatgtgctatttgtttataggggccttatttattctatctgtttcttctgaattatgattgctaggaaaatgaaggtgaagaaaattctgcggaaaacacttttagcctcagcagccctgacatcacccttgaggaacatgacaacaacaactgtgttgatcaagatactgcatcaacagagacaacaccaactacagagaaggtgatgcatcaagaacaagtctcagagcaggtgaagatggcagaaacagcagaagtgaaaccggcagaagaaacagaaaccacaccaatggttcaaacagaagtgaaactggaagaggaaacggagaccacaccagttgctgaaacaacagaagtgaagccggcagaagaaacagagacctcaacagtggctgaaactttacaggtgaaaccagccgaagaaacggataccacatccatggctgaaacagcagaactgaagctggcagaagaaacagagactgcatcaatggctgaaacagcagaagtgaaactcgcagaagaaacagagaccataccaatggcagaaacagcagaagtgaaactagcagaagaaaaagtcatgaagaaaaatgagtttgaacatgaggaagagaattctaaggaagaatatgttaaaccggtcaattcactggcatattcctcagtgccatctctgcttaagcgaacggtgaagaaagggcaggtgaatcctagatggaatgagacagggatgaagctagagcaagattgcaccaacggtgagctgaatgagcatgacctgaccaaagcaggagctaccgcaatgggaggagctgttttgaccatggctcgtaggcctgattctatggccattcttgctcttatagttgcagttaccatcgcgataactatcgtcgtgcgcctatatgttcctctgcaagcaacatgatctttagatgaacccacggtaagttcgcaaaatgcaacggagttcttctctgatcacttcaaattctgaactgtatgtatggaaaatcaacggagtcgaattgtacaagggggaaaaaagcctctactagtatgagttaattataactcattggatagcctaaatgccaggtgtaacctgtagtagcaaggcttagtatcaagaggcaaaaagaagatagtatgttcagatcatagagtttctcctaagaggtagactgctagtctttcttttctgtagggtatgtcactgcttcagtgctgaagtatcaaaaaaggttgcgacagggcaaccagcaacaaaactatgttgaaattgtgatgaacaacatgcagtttatacgaattattcttctctcttatcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0552800, RefSeq:Os12g0552800