Os12g0556300

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0556300| Description = Calmodulin binding protein-like family protein| Version = NM_001073534.1 GI:115489029 GeneID:4352496| Length = 4364 ...")
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Gene Name

Os12g0556300

Description

Calmodulin binding protein-like family protein

Version

NM_001073534.1 GI:115489029 GeneID:4352496

Length

4364 bp

Definition

Oryza sativa Japonica Group Os12g0556300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22839520..22843883

Sequence Coding Region

22839602..22839801,22839913..22839961,22840665..22840702,22841022..22841103,22841191..22841240
,22841426..22841892,22842037..22842200,22842287..22842493,22842599..22842755
,22842903..22843010,22843206..22843279,22843409..22843606

Expression

GEO Profiles:Os12g0556300

Genome Context

<gbrowseImage1> name=NC_008405:22839520..22843883 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22839520..22843883 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaattaatggcgccgaagaagagggagctgctgctgctggagcgcagggggtcggagaagcgcctgcgggtgacggtcccagtcgccgccgccgccgccgtggcggccgtcggtgtggggacggcggcgctggcgtcgccggcgacgaggatgctgcgcaagatcgtgctcgtgctgctcttcctgctgcgaatgagcgagagggtcacggtcgtggagagcatctctcagattggccgtatggttcagaggcttcacaatgctcagggtgttattatcaaaaaattggaaaatatacaggaaaacatgctggagcggatggaaaacatgcaggagcggatggaggatatcagtcatgaagtgaaacaattgaagcatctgcattccaatcgtcatgctgatcaacacccaggactggagccaaacacaaatgttcaactgcgtttcctggataatctgaagactcctgtttacaccgaaaagaacatcacagctgaaagcaacgaggctatcagaataggtatctttgaaggtgacaacatgattacagatggcccactttccaaggtgaaagtcgaaatcgtagttctccgcggtgatttctccaacgatggtcgggtgagctggactgaagagcagttcaacaatcacattgtgcaaggtcggaatgggcaaggattcgtgttgggcggtgattgtggtgtttggttgaaaaagggggaaaaccgcttgggcaagatccgtttcaaggaaggatcatccaggacccgcagtcggatgttcattttgggagcaagagtatgcaagagcgaaaacaccggtgtccgagttcaggaagctgtcatgaagccagttaccgtgttggatcgcagaaatgaagcaaatgagaagaggcatcctccaatgctggacgatgaagtgtttcgcttggaggaaatctgcaaagatgggacttaccacaagaggcttcagaaggctaaaatcttcacagtgcatgacttcttgaaggctttgaacacgaacgccaagaagctccgtgaagaagttctccagatgaagaagaagacgaactcatgggataaaatggttgggcatgccagggagtgctgtctcagagaccagcatgagctgaaagcgtatcaaagtgaagaagaaaatgcgacacttttcttcaacggtgtgcatcaaattgttggagcaaaatttggtggtgattatgtcatatatgaaaattttgatccagcccaaaagacaaaagtgaataaactgaaagaccgtgcacatgctaaattggatgacattccatccgattttgtaatgaaaaacaacattcctgaaccgatcagtccaacttcagcagctgctgcaggcccatcaaatcgttctgatcatcagatgccaaatcaaggaactataggagctgaaaacttgtgcaatggtgtggcgttttactcgaatgcaatctgcgactgcagcacctctaatcctaatgatgtgagcacacatgattatccagatcaagcaccaacgccatttcctgattggcaacaagatctccaaaggctgatgagctcttctgatacaatcgactggccgagctttgagaggattgtattgggtggcacctcagaggaatcgagttctgctcaacaccaagttcatcaactccatgaaagcatgcctcctgctacatcgccatgggtggcggcgccgcaatcgcgtgctcaacacggggaggagcctagcaggttaccatttccaggatcagaccacaataacaactgttag</cdnaseq>

Protein Sequence

<aaseq>MEELMAPKKRELLLLERRGSEKRLRVTVPVAAAAAVAAVGVGTA ALASPATRMLRKIVLVLLFLLRMSERVTVVESISQIGRMVQRLHNAQGVIIKKLENIQ ENMLERMENMQERMEDISHEVKQLKHLHSNRHADQHPGLEPNTNVQLRFLDNLKTPVY TEKNITAESNEAIRIGIFEGDNMITDGPLSKVKVEIVVLRGDFSNDGRVSWTEEQFNN HIVQGRNGQGFVLGGDCGVWLKKGENRLGKIRFKEGSSRTRSRMFILGARVCKSENTG VRVQEAVMKPVTVLDRRNEANEKRHPPMLDDEVFRLEEICKDGTYHKRLQKAKIFTVH DFLKALNTNAKKLREEVLQMKKKTNSWDKMVGHARECCLRDQHELKAYQSEEENATLF FNGVHQIVGAKFGGDYVIYENFDPAQKTKVNKLKDRAHAKLDDIPSDFVMKNNIPEPI SPTSAAAAGPSNRSDHQMPNQGTIGAENLCNGVAFYSNAICDCSTSNPNDVSTHDYPD QAPTPFPDWQQDLQRLMSSSDTIDWPSFERIVLGGTSEESSSAQHQVHQLHESMPPAT SPWVAAPQSRAQHGEEPSRLPFPGSDHNNNC</aaseq>

Gene Sequence

<dnaseqindica>83..282#394..442#1146..1183#1503..1584#1672..1721#1907..2373#2518..2681#2768..2974#3080..3236#3384..3491#3687..3760#3890..4087#gaaagagagagagagcgcgcaatccaagaacacgagagagagaggagtccaagaacgagagagagagagagaggggaggggaatggaggaattaatggcgccgaagaagagggagctgctgctgctggagcgcagggggtcggagaagcgcctgcgggtgacggtcccagtcgccgccgccgccgccgtggcggccgtcggtgtggggacggcggcgctggcgtcgccggcgacgaggatgctgcgcaagatcgtgctcgtgctgctcttcctgctgcgaatgtgcgttcctgctgcctccatccatcgtgtccttgctaatccccatcccatcccatcccatctctctaatttttatttttattgttttgttctttgtgtttgtgtgtgcaggagcgagagggtcacggtcgtggagagcatctctcagattggccgtatggtgagcaaatggataaacggatcaatgattttgcccccctgcaaaaaattatacagtcgttttgttctctgcaaaagtgcaaatctttatctttcttcctccaatgattttagcccctttccttttgcatatacttgtttgatttgatagtcgtaaaggtagcatattccatcttcagtactgattcccaatctagtatcactccgtttctaattatttgacgccgttgacttttttaaacatatttgaccgttcatcttattcaaaaaaattgtgtaattattaatttttttcctatcatttgattcattgttaaatatacttatatatatatatatatatagtattatatatttcacaaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagttaacggtgtcaaatatttagaaacggagggagtaataattaacatgttgttctgaaagtcgggcaggtgcatatctgtttgtgatgtatatgaaactcattttatcttactgatttaactgacagtcataagtttgttttggtatggtatttggttcagcaaaaatggcataaactcattgtactttgatagtttgatattgggtatttcttttcttcctacagcctacaatgtttcttcttcctgtttccttcttgtttcatggctgtggctaaatttacgttcttgtgctttcataggttcagaggcttcacaatgctcagggtgttattatcaagtaagtgtgtgatagttatattgttattttaccattttatttctcttctactccgtatcaatatgcttcaggggcggagccaccgcccgggctcgccggcgaaaactccattaaattttaatattgatgagtaaatcgatgatgaaatttctgtagtaaatactagttatatggaaatttgccttggctcaaaaatcttcctggctccacgactgatgtgctttaataactagcatgagtagtttttatttttctcatgaaaatatggaagttctgcatgtcatagtttaatgaaaaatgatttttttttggttatcagaaaattggaaaatatacaggaaaacatgctggagcggatggaaaacatgcaggagcggatggaggatatcagtcatgaagtggttagttccatagtcctctaaatcagtgttttacatgtttcatcctcatttgataaccttgtacttttttttttctcacactgacagaaacaattgaagcatctgcattccaatcgtcatgctgatcaacacccagggtaaaagattcacaagtgcacatcattcatagattctttcgtccttttttgttctcatcgtgaaatgttagatattaattatccatttggccagttgtcaagttctcttttccatagtgtactatatcaatttactaacactacattctgagctttatcatattgtcctccatgcttttcttcagactggagccaaacacaaatgttcaactgcgtttcctggataatctgaagactcctgtttacaccgaaaagaacatcacagctgaaagcaacgaggctatcagaataggtatctttgaaggtgacaacatgattacagatggcccactttccaaggtgaaagtcgaaatcgtagttctccgcggtgatttctccaacgatggtcgggtgagctggactgaagagcagttcaacaatcacattgtgcaaggtcggaatgggcaaggattcgtgttgggcggtgattgtggtgtttggttgaaaaagggggaaaaccgcttgggcaagatccgtttcaaggaaggatcatccaggacccgcagtcggatgttcattttgggagcaagagtatgcaagagcgaaaacaccggtgtccgagttcaggaagctgtcatgaagccagttaccgtgttggatcgcagaaatgaaggtgcttttttttttccattttttcaggcagctgtttcttagcagtggacactcatgtggagtgtagaggccggaatggcatccattatcttaaaaacaaatcagctttttctttaccaggacacatttgtcttgtcttttgcagcaaatgagaagaggcatcctccaatgctggacgatgaagtgtttcgcttggaggaaatctgcaaagatgggacttaccacaagaggcttcagaaggctaaaatcttcacagtgcatgacttcttgaaggctttgaacacgaacgccaagaagctccgtgaagaagtaaaacatgttccatacattttgtttgcagctgtcgtactattgtcatcatgattcatgacatccatccatttgttgctatgcaggttctccagatgaagaagaagacgaactcatgggataaaatggttgggcatgccagggagtgctgtctcagagaccagcatgagctgaaagcgtatcaaagtgaagaagaaaatgcgacacttttcttcaacggtgtgcatcaaattgttggagcaaaatttggtggtgattatgtcatatatgaaaattttgatccagcccaaaaggtacatgctgaactcaacatctttctggcagcatatgatcctatgttcatttgtgtttcctttatcagccaatcgataagaaacaaatatgttgttgtcacgcagacaaaagtgaataaactgaaagaccgtgcacatgctaaattggatgacattccatccgattttgtaatgaaaaacaacattcctgaaccgatcagtccaacttcagcagctgctgcaggcccatcaaatcgttctgatcatcagatgccaaatcaaggttagtaaagacttgctgtactagtctactggatacctggttattttttggtcttcgacgcatatggtgcacactacacgatactctctttgaatgctcttgtcttcctcaccacacacaattgatgccggaatttcttatttcaaggaactataggagctgaaaacttgtgcaatggtgtggcgttttactcgaatgcaatctgcgactgcagcacctctaatcctaatgatgtgagcacacatgattatccaggtacttactgattccacaattttcctttggtagggttttgcttggatatgtgaatttcctttcaactttgagctaaacattaagaaatacccaaacgagtccctctacccctttagctcttatcttttccttcgtgcatgcattctgcatcaatcattttgatacgatgacatctaaaactccaaatttttgcagatcaagcaccaacgccatttcctgattggcaacaagatctccaaaggctgatgagctcttctgatacaatcgacgttagtgaaacccacagcaattcagctctgtttatttttattttcattactgtcaggatgctgtgtacagctcagtgcttgcagtaatttttacatagtatggttcatgactcggcattcattttgcagtggccgagctttgagaggattgtattgggtggcacctcagaggaatcgagttctgctcaacaccaagttcatcaactccatgaaagcatgcctcctgctacatcgccatgggtggcggcgccgcaatcgcgtgctcaacacggggaggagcctagcaggttaccatttccaggatcagaccacaataacaactgttagtaacaaattgacagtgcagttcttctatgccaaaaaaagaaaaaaaaaaggcaatgcagttatcaggttgctgcacagctatgtactcagttgtctcgtcagtgtagtgtacagatttgcagtgtgcaattctgatttaggttgtggctatcttattcatctgcagatcattagtgatctacggtgtgtttgtaatgtgtaactgtaagtctgtaacaatgcaggtggtatgtctgctggccaaaagaaagaaaaagaaatgatctgtgatgtattt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0556300, RefSeq:Os12g0556300