Os12g0556400

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0556400| Description = Conserved hypothetical protein| Version = NM_001073535.1 GI:115489031 GeneID:4352497| Length = 2743 bp| Definition ...")
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Gene Name

Os12g0556400

Description

Conserved hypothetical protein

Version

NM_001073535.1 GI:115489031 GeneID:4352497

Length

2743 bp

Definition

Oryza sativa Japonica Group Os12g0556400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22845042..22847784

Sequence Coding Region

22845103..22845340,22846395..22846492

Expression

GEO Profiles:Os12g0556400

Genome Context

<gbrowseImage1> name=NC_008405:22845042..22847784 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22845042..22847784 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcaccggcgtcggcggcggcggaaggcggtcgccggcacgccacagcaaaggcaaacccgcagcagcacgaacaaacaggcgagcgatgggaggaggcgaggccaccagcggaggaggaggagggttccgcgcgcgggtggagcactacctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatcttcggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatcttcgccaaaagagtga</cdnaseq>

Protein Sequence

<aaseq>LTGVGGGGRRSPARHSKGKPAAARTNRRAMGGGEATSGGGGGFR ARVEHYLYSGEKKHVVAGIAIFAAIFGVPWYLMTRGAKHQSHQDYMERANKARSERLS SGQASSPKE</aaseq>

Gene Sequence

<dnaseqindica>62..299#1354..1451#gcttattagtgggcccatcatccactccggcccacgacgaccaacaccaaacaaaccctagctcaccggcgtcggcggcggcggaaggcggtcgccggcacgccacagcaaaggcaaacccgcagcagcacgaacaaacaggcgagcgatgggaggaggcgaggccaccagcggaggaggaggagggttccgcgcgcgggtggagcactacctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatcttcggcgtcccctggtacctcatgacccgaggtattccgcatgatcgctttctctcttcctcccctcatcatgaactgatttgaccccccaagccgttcagagaaccagttcatgttgctgatgatgaactcagtagtgtggaactacgatgttactaggttctaggagcgaagggatttttcgcacaagagtttattgtacaatactgtggtgataatggcatctggtatgttttttgagacccgtgaaatgaaacgggtttgaaatttgggattgcttgggggcgtatatgaattgctatgaagatttaggagtttcccttgcgtgccgaattttgggaaaatgcaggcattgtaagcgtaataacttggtaatctcaccaaatcaggctggtactgcaacttgtgacaggctattttgcttcagtaccagcgctactagactaagcatttgttatttcgttgttttgagatcttcctctctcttgttgtcacaatgttctcagattgtcaccgtcagtacgaagagattcgtactactagaaaatatcccatccaatcctagattcttatatttttgggacggagggagtattaatgataatgatcccttgcacaatacccttggagctatccagctagttccatgtacattgtgcacatgacactgtcactgccatcaccattgcttatcatctcgcagtttcatgccctctctttcttttactgttaagttttgatgatcaatcagcaatttgaggtgtccgtgttcattttgaagtttttataactgatataaggacagctacttgatcttgccttttttttttgagtggtgtgatggtactaaactcttagctattcgtaatacgcatctctacattttcagggtgaccaaagtgtttaacataaaattagatatgagttagatctgtgcttttaggctgggcaggcatgttttggtttctggttgagaatgaatgttgatttttgttgactgtaacccacaaatgatgaaatttttagaatactctttttgatacatgaataccaactgattatgcaatttgttccatctactgcaggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatcttcgccaaaagagtgaaacagtaatcccctaactcagatttgcaaaacctcaggccgacacagctatgataatctgagaattcgatcctgttgtgaaataagcagaccatctcgattctcatctttcagttgtaggaaacatgggttgaatgtaatacgtcacatgaaattttgtcaaatgcagctagctctctttacattccgcactattctacaaggagatgattgacaaagacaaacacctgatttatttgtctcaaatgacgattctagagccaattaccttgacttgagatattcatgcgtctgtttttgtggatggctatatcttctgtgtgtttgtgacatgagattgttgtactgcggagatgcaattttgtcacaaggtgagatgaatttatccgttgcagggaaggcatacaacttccgttgcagtgagctggttgattcaagctcaatctggatgcatggtgctttgtctacaacccaatgtaggccgtgtggcatgcctgtttattcagtgtctaaaattgcaaagttttcttcccgtcgcccaaaagatttaatttttttctacttgcccctatctctgaactgtgctgtttatagtttttgcagatgactgaatactaaccattaccaatttaattagcgttgctatggataggacaactgcctccaactccatggagttgtgttgatatgcaatcttccccatcaattgaaatgtggtggatttaaacaaaaaagaaagaaagaaacaaatgcacatccatctgaaaaacccagaaggaaaatattgtcatctacagaattgcagtctgaagatttgctgttctttctctgctggaaaagaagcagtgacaacaagaagctgacacaagcgtgcctatggttagggagatccaaattagagaagaatgattctgaactcttcccatgtcggcattaaactacaattcgacggggttgattaatcatcactacagaatcaagtcgtggcttactggcatatcaagaggggaaaaggtgaatggtttgatacttcgatgaaaaccacgcggattccccagaaatagtcctcgttactcgtcaggtgcacacgcttacagcaccagtacttctgacattgtgattagtttccatagtcccatgtccttgttttgatttctttttaaggtaatgtgttcttgtttttctatggcaaacatgataggggcattcaaaacaccctatggttttcgagctttcgacttttgatgcaacataagtagggtgtagctaaaattagtaaagactcatctaact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0556400, RefSeq:Os12g0556400