Os12g0557400

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0557400| Description = Conserved hypothetical protein| Version = NM_001073538.1 GI:115489037 GeneID:4352500| Length = 2495 bp| Definition ...")
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Gene Name

Os12g0557400

Description

Conserved hypothetical protein

Version

NM_001073538.1 GI:115489037 GeneID:4352500

Length

2495 bp

Definition

Oryza sativa Japonica Group Os12g0557400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22914541..22917035

Sequence Coding Region

22914745..22914960,22916321..22916540,22916692..22916900

Expression

GEO Profiles:Os12g0557400

Genome Context

<gbrowseImage1> name=NC_008405:22914541..22917035 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22914541..22917035 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgggcgacgcggttcctggcggcggtctgcttcttcgcggcgggcgtcgtcttcgcccccgacgtcctcctcggcgcccgctccggctccggctccggcggcggcgccgccgcggccgccaaggtggcccacctcctctgcttcgccacctcatggggcgccgccctctgggccaccttcatcggcggcatcatcatgttcaagaatctgccgaggcaccagttcgggaacctgcaggggaagttgttcccggcctacttcatgctcatctccgcctgcgccgccgtctccgtcgccgccttcgcctacctccacccgtggaagacggcgtccaccgtcgagcgctaccagctcggcttcctcctcgccgcccttggcttcgacctctccaacctgctcgtgttcacccccatgaccatcgagatgatgaagaagaggcacaagattgagagggacctgagcattggtgaggaggttgggtggtcgaagaatgttcaggtggcaaaaaacaaccctacccttgccgcaatcaacaagaagtttgggatgatccacgggctctcgtctttggccaacatcatgtcattcggcagcctagccatgcattcctggtaccttgctagcaagcttgagatgtga</cdnaseq>

Protein Sequence

<aaseq>MGWATRFLAAVCFFAAGVVFAPDVLLGARSGSGSGGGAAAAAKV AHLLCFATSWGAALWATFIGGIIMFKNLPRHQFGNLQGKLFPAYFMLISACAAVSVAA FAYLHPWKTASTVERYQLGFLLAALGFDLSNLLVFTPMTIEMMKKRHKIERDLSIGEE VGWSKNVQVAKNNPTLAAINKKFGMIHGLSSLANIMSFGSLAMHSWYLASKLEM</aaseq>

Gene Sequence

<dnaseqindica>2076..2291#496..715#136..344#accttttccatcccttctctccaactacctccttccctcctccatctcgacacctcctcctcgtctccggccgccgcttccccctcgccgccggcgcctcctcgagaccgtcgagatcgagatagagagagagtgatggggtgggcgacgcggttcctggcggcggtctgcttcttcgcggcgggcgtcgtcttcgcccccgacgtcctcctcggcgcccgctccggctccggctccggcggcggcgccgccgcggccgccaaggtggcccacctcctctgcttcgccacctcatggggcgccgccctctgggccaccttcatcggcggcatcatcatgttcaagtaatcccaccactcccaaaaaccttggggagttcttgatttttttcccccaattccaagaacccagattgcttcaaatctgagattacttcaaatctgatccgagagttggattcgattggatgaatggttgtttgtttgtgttggaaaggaatctgccgaggcaccagttcgggaacctgcaggggaagttgttcccggcctacttcatgctcatctccgcctgcgccgccgtctccgtcgccgccttcgcctacctccacccgtggaagacggcgtccaccgtcgagcgctaccagctcggcttcctcctcgccgcccttggcttcgacctctccaacctgctcgtgttcacccccatgaccatcgaggtcagctattacttaatttgtacaagattactacaagctgtcagtttagggttggtgatggcaaattagcaatagtagatgatttattcttcatatatatcatcctaatcagcataaataatacttcacctgttatggaagtttgttagaaaatggcgagacatgacgcaacaatacataatcaactctactggtagttaacaagcgtttcttgcattgcttgattgttgattggctaatactagtaacttttagttgcgggatagtgatagttttgggttgcaggcttcttttcctatagtggattccagagttgagaggttgatatttgtgctactctaacttgaatctaattttggatgctcttgattatgtgggtagggatgttgctaattagagaacagcatcagcattacctttaattattttgattgcttatgtaattgctttaccaaattgagacctcctatagctgcattatagtgctcattgctataacctataatgccaagtttttaaaggcaactatgcttcagtgtggtgttgtttaccatgacataactcttccattaaaatgtttaatatcttcttgaagatttttcttcattaaatggcatatgaagtgtgcaattttagtactttgttatggatgtatgaatgttgatcgacgttagactccttcatccctgttagatctcatgtgttactttaggttattggtcagaataagcacatatgtgatgccatagtgttggtgattacatgatggtcatcatggatgtagaagattgtatcagatagtagtaggttatctttgttgttcctaagcaacataaattatactttgcatattaacttgttgatgcaactatatatagtcacttgtacttataatctatatgttaaattcacaagcatccttattttggttgattactagtaagctatctcactgctgatattcttaatttagttcataatttgtgctattttctgcttcctttcaagtactgaaactcctaatcctttgaagtgcctctatccagtcatttttttgtgtaaagtgatgtgcagttgagtagttgacagtgatacgttgccatatcccctatttgttttatattcaatgatatttaactacccatactctagcaaaacatgtttatgattctcttataaagtgcagcaacactaatgcttttctttaatagaatatttagttgtatatgatatgtcaatcatttgcctttttgtatgaaccaagacctatggtaaccatgcctaaacaaattagaagatccccttcctttctcttcatctcctagtgcgacgataatatttggttgtttgatcctcgcagatgatgaagaagaggcacaagattgagagggacctgagcattggtgaggaggttgggtggtcgaagaatgttcaggtggcaaaaaacaaccctacccttgccgcaatcaacaagaagtttgggatgatccacgggctctcgtctttggccaacatcatgtcattcggcagcctagccatgcattcctggtaccttgctagcaagcttgagatgtgaagtgaacaaacacccttgaccaacattcagttgaatcagatctgattgcatcacaatattaatgtggcaaagcctcatttggagagcttgcaaatatatttacgtgtacaatgattcgactcgagattagttgtacttaaaataatgtacagaatccacgcatttctcgccagtttattataagttcatgaaccaaaactattc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0557400, RefSeq:Os12g0557400