Os12g0557800

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0557800| Description = Protein prenyltransferase domain containing protein| Version = NM_001073539.1 GI:115489039 GeneID:4352501| Length = ...")
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Gene Name

Os12g0557800

Description

Protein prenyltransferase domain containing protein

Version

NM_001073539.1 GI:115489039 GeneID:4352501

Length

3696 bp

Definition

Oryza sativa Japonica Group Os12g0557800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22926832..22930527

Sequence Coding Region

22928362..22929836,22929879..22930452

Expression

GEO Profiles:Os12g0557800

Genome Context

<gbrowseImage1> name=NC_008405:22926832..22930527 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22926832..22930527 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggagcatccatcaccccaatctcctcctcctccgccgccgccgctgccgccgcctctccggcgcaaatcgccgccccgaaaccccaccgagatccagcctctccaccaaatccgccgcgaacccaccggaccccgccgaccctgcccgcgccgcctcgatcttggccgaggatgactggttcccccgtctcaacgccgagttcgccgccgcgctcccccgcctcggcccccgcttcgtcgtccgcgcgcttcgtgcggcggcggagagggaggggttgggggagccgctgctctgcgtgcggctctacgtgtgggcgtcgcggttcggcgcccacttcgcgcgcgacggcggcgtgcggcgggcgctcgtgggcgcgctgtggcggcgcgggccggtggtgctgtcggggaggctggtggcggaggtgaggggttgcgggtgcgaggtgtcggaggagctggtgtgcgcgctggtggagagctggggcaggctggggctcgcacgctacgcgcacgaggtgttcgtgcaaatgccgcggctgggtctgaggcccagcacggcggtgtacaccgcgtacctcaggttccagcagatgcccgccgacgggtgccggcccgaccacttcacgtacaactcgctcgtccacggcgtgtgccggcgcgggatcgtcgatgaggcggtccggctggtgaggcagatggagggggaggggatcaggccgaacgtgttcacgtacaccatgctggtggacgggttctgcaatgccggcagggtggaggaggcgttccgtatgctggacaagatgaaggagaagggcgtggcgccgagcgaggccacttacaggacactggttcatggcgtgtttcgctgcttggagagagacaaggcatacaggatgttgagtgattggctaggccatgagacgtcccttcacccgagcgcatgccacacgatgctgtattgcctgtcgaagaaggacatggccaaagaggcagttgagtttgagaagaggatgagtgctaggggttatctccttgacagcacagcatttggcattgtcatgtcttgtgctctgaaatgcctggaggtgagtgatctatgtgagttactagattctttcattaagaatggcgggaatccaggatttgatgtatatattatggtaatcaaatccttgctgaactgcaagaatttttcgaaggcaaaccactatttggggcacatggttttaaagggactcttgtctagtgtgatgtcttacaacatggtgatagattgcttcgtgaaggccggggcagttgataaagcagaggagattgtcaaggagatgcaagacaaaggtttcttgcctaaccttgtcacctttaacacactaataagtggatattcaaaattagggaatgtacataatgcaaaggttgttcttaagatgcttatggaacatggtttcatgccagatatcattacatttacctctcttattgatggcctgtgcaatacccatcaactggatgatgcttttgtttgctttgaagagatggcagagtggggtgttagaccaaatgctcagacttacaatgtattaatgcacacactttgttcagcagggcatgttaacaaggctattgatcttcttaataaaatgaaaatagatggcgttactcctgatgcatattccttcaatgccctcatcttgagtttttgccggatgaggaaggtagataaagctgaagatattttcaatgacatggtgagatttggtgtggttccagacagttacacatacaattccctgataaaagctctatgtgatgaaaggagagtcaataaggccaaagaaattctatttgcaagggagcgcagtggctgcagcacgagcaataatcaatcatattggccaattgttgctgcacttgcaaaaatgggtcaattcagtgaggcaggagagttaatggataaatacctcagtagaaatgctcagtcgagttgtggctctaatcagagcatagagtctgaagttgctgttcaagttgtcaatgcgtga</cdnaseq>

Protein Sequence

<aaseq>MRSIHHPNLLLLRRRRCRRLSGANRRPETPPRSSLSTKSAANPP DPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVR LYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALV ESWGRLGLARYAHEVFVQMPRLGLRPSTAVYTAYLRFQQMPADGCRPDHFTYNSLVHG VCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVA PSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAV EFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIK SLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGF LPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDA FVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALI LSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSG CSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLSRNAQSSCGSNQSIESEVAVQVVNA </aaseq>

Gene Sequence

<dnaseqindica>692..2166#76..649#gagccagagaggcagtagtgattagtgaacacccagaccagaaaggcggcgatttttgttggatgcaaaccgcaaatgaggagcatccatcaccccaatctcctcctcctccgccgccgccgctgccgccgcctctccggcgcaaatcgccgccccgaaaccccaccgagatccagcctctccaccaaatccgccgcgaacccaccggaccccgccgaccctgcccgcgccgcctcgatcttggccgaggatgactggttcccccgtctcaacgccgagttcgccgccgcgctcccccgcctcggcccccgcttcgtcgtccgcgcgcttcgtgcggcggcggagagggaggggttgggggagccgctgctctgcgtgcggctctacgtgtgggcgtcgcggttcggcgcccacttcgcgcgcgacggcggcgtgcggcgggcgctcgtgggcgcgctgtggcggcgcgggccggtggtgctgtcggggaggctggtggcggaggtgaggggttgcgggtgcgaggtgtcggaggagctggtgtgcgcgctggtggagagctggggcaggctggggctcgcacgctacgcgcacgaggtgttcgtgcaaatgccgcggctgggtctgaggcccagcacggcggtgtacaacgcgctgatcgcggcgtcggtgagggcgggggccgtcgacaccgcgtacctcaggttccagcagatgcccgccgacgggtgccggcccgaccacttcacgtacaactcgctcgtccacggcgtgtgccggcgcgggatcgtcgatgaggcggtccggctggtgaggcagatggagggggaggggatcaggccgaacgtgttcacgtacaccatgctggtggacgggttctgcaatgccggcagggtggaggaggcgttccgtatgctggacaagatgaaggagaagggcgtggcgccgagcgaggccacttacaggacactggttcatggcgtgtttcgctgcttggagagagacaaggcatacaggatgttgagtgattggctaggccatgagacgtcccttcacccgagcgcatgccacacgatgctgtattgcctgtcgaagaaggacatggccaaagaggcagttgagtttgagaagaggatgagtgctaggggttatctccttgacagcacagcatttggcattgtcatgtcttgtgctctgaaatgcctggaggtgagtgatctatgtgagttactagattctttcattaagaatggcgggaatccaggatttgatgtatatattatggtaatcaaatccttgctgaactgcaagaatttttcgaaggcaaaccactatttggggcacatggttttaaagggactcttgtctagtgtgatgtcttacaacatggtgatagattgcttcgtgaaggccggggcagttgataaagcagaggagattgtcaaggagatgcaagacaaaggtttcttgcctaaccttgtcacctttaacacactaataagtggatattcaaaattagggaatgtacataatgcaaaggttgttcttaagatgcttatggaacatggtttcatgccagatatcattacatttacctctcttattgatggcctgtgcaatacccatcaactggatgatgcttttgtttgctttgaagagatggcagagtggggtgttagaccaaatgctcagacttacaatgtattaatgcacacactttgttcagcagggcatgttaacaaggctattgatcttcttaataaaatgaaaatagatggcgttactcctgatgcatattccttcaatgccctcatcttgagtttttgccggatgaggaaggtagataaagctgaagatattttcaatgacatggtgagatttggtgtggttccagacagttacacatacaattccctgataaaagctctatgtgatgaaaggagagtcaataaggccaaagaaattctatttgcaagggagcgcagtggctgcagcacgagcaataatcaatcatattggccaattgttgctgcacttgcaaaaatgggtcaattcagtgaggcaggagagttaatggataaatacctcagtagaaatgctcagtcgagttgtggctctaatcagagcatagagtctgaagttgctgttcaagttgtcaatgcgtgaagtgtgatctattgactgcatgctaatttacacatgaatgatgccctatcctcagtgaaaggtgcaaaacagcctcatctttgcttaaggtacattagatcaacacctcaataattgcttcacataatctgttgtcgcaatattttctcaacactctgtttcttatttcaatcgcacctaatcgtggtaacaaaagcttatgtttctctatgttgaatattgtttccagatgaaggatttgtaccttccaacgccatagagatattaagctctatggcatcgatggaatttcaaaaattatatggatttaagctttctactcaggaaacaattgcagaacaaatcggtgcattccttttaacactttcacatgttctggtaactttggtgcatcataggcttcataaaaagttcactatttttgatcttgtgaatactgctaaagacaagacataagctaagaaaaacttaactgcatttgtaattttccttgtatttgattagctgtgaagcatcatcatacaaattgaaagcgaaaacattcaaaaagattttggtttaaaataattgtgaacagaaaatagtcactggaaaaaatcagtgtatcacgatcagtagtctaccaacatgcccccactaaagatgtaacaccaactaagcattccaatgaactttgagaacttgctcacagaatttggctgggaaggaaacaatgatgcttttatactcacatggactggaaaagcagcagggatttcagcttgatattgctcttttgtacattctgacattgtaggttcgataggtacagtggtcctccagtcctgatttgttgttgcattcattagtcctgtattgttctcaacttcctgaaccatttgttttggtttactaattggtttttattgtttttacagggcagttggcttatgaacggtatacgtgcaatgcttttctcttgggaaacaaataccatacagaaacaaaaagctgagtggttcctcccttgctgaggaccagtggttcttggctgtttcaaagctcactgtcaagttagagattatcagtgctctaatcccttcacactagttccaaagtccaaacctaaaggaatttcctttcatgttaatgatcacatgaagtaaagagctgcctcctcctgatattgagttctctattataaattttagatttctgtgttctggaggtgaagaacactgatccacacatgcgcgtacatttgttgctgctgtttatatgtaaacatctagcaacattatcggtggagtgattatttcgcatcatggtgatgtggctaaccggctacagtgttgtagatttgagatatgctaaaagttacttgtgccaactgccaagaacaaagtgacatctggagagagagagagagaaatatttgccagctatatattttttgaattgagattgaaagaacagtgacaattagagctgcatatcgtcagcttgttgaatgttttttttttaacttgttgaatgtatgtttaatttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0557800, RefSeq:Os12g0557800