Os12g0559500

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0559500| Description = Similar to Resistance protein T10rga2-1A| Version = NM_001073545.2 GI:297613346 GeneID:4352507| Length = 4143 bp| D...")
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Gene Name

Os12g0559500

Description

Similar to Resistance protein T10rga2-1A

Version

NM_001073545.2 GI:297613346 GeneID:4352507

Length

4143 bp

Definition

Oryza sativa Japonica Group Os12g0559500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23085886..23090028

Sequence Coding Region

23085886..23086518,23087089..23087102,23088990..23090028

Expression

GEO Profiles:Os12g0559500

Genome Context

<gbrowseImage1> name=NC_008405:23085886..23090028 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23085886..23090028 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccacggcggtgagcattggcaggtccgtgctgaagggagctcttggcttcgccaaatccaccttggtggaggaggtttccctgcagctcggcgtccagcgcgaccaggcgttcatcagggacgagctggagatgatgaactccttcctgatggccgccaatgatgagaaagatgacaacaaggtggtaaggacctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgcctccaggacttggccgtccgcttggggaggaagagttcatcctggtggctcagccctcacacgctgtgggagcggcgccgcatcgccaagcagatgaaggagctgaggggcaaggttgaggatgtgagccagaggaacatgcgttaccaactcatcaagggctccaagcctaccgtagctaccaatgtcgcacccagcagcactgcccgtgcgaccatgtctggcgtgcatgaagaacggtggcagcatgacaaggcagtagctggtctggttcggctggtcatcaaaaccaaagtcgatgaacttagagtgattgcggtgtggggaacgagtggtgatatcagggaaatgtccatcgttggaggggcctatgatcatctcaagagaagcaacaagtttgagtgctgtgcctgggttaatttgatgcatcctctgaacccaacaaagctcctgcaaaccattgttaggcaattctatgtaagatctcttcaggaggctggcaaagcaactccgtcgtgtcaaattctgagtagcatgctgataaaggaagatcatttgaacgatgagttcaatgaatatttgagtgacaagtgctacctcgttatgcttaatgacctatcaaccgctgaagaatggaagcaaataaaaatgctcttcccagacaacaagaaagggagccgaatcatagtgttcacacaacatgttgaagttgcaagcttttgtgctaggaccgaggaggtggcacccgagcaaatgcagctgtttgctgatcagactctttatgcttttcgcttattatgcaatacgggtgctaaagatggagtagattcaatggaggactcatctaacttaaacgaagacactacatacaacgctgtagaaggaaagagcctccctcgcacatattcaatggtaactgctttcaaggaatctgagatcgttgggcgagttgatgaaataaaggagattattgaactgatttcaaaaggtagccaacagcttgagaagatctcagtgtggggaatgggtggtattgggaaaaccactctaattcaaaatgtctaccgaagcgaaaaggttaagaagatgtttgataagcatgcatgtgtcacgatcatgcgcccgttcaatcttaatgatcttcttatgagcttagttaggcaactagaagattcaaaaacttctggagaaaaggagttggctagcattttagaaggaaagaaatacttgattgttcttgatgatgtattatccacaacagaatggaatgctatagaatcatatttcccagcaatggaaacaggaagccggatcataatcaccacaaggcatgaaagtattgctaagcattgttcaggggatcaacaaggaaaaatatatcaactcaatcgtctaggagacagcgatgcaaagaacctttttgcaaaaaaggtaacctaa</cdnaseq>

Protein Sequence

<aaseq>MEATAVSIGRSVLKGALGFAKSTLVEEVSLQLGVQRDQAFIRDE LEMMNSFLMAANDEKDDNKVVRTWVKQVRDVAYDVEDCLQDLAVRLGRKSSSWWLSPH TLWERRRIAKQMKELRGKVEDVSQRNMRYQLIKGSKPTVATNVAPSSTARATMSGVHE ERWQHDKAVAGLVRLVIKTKVDELRVIAVWGTSGDIREMSIVGGAYDHLKRSNKFECC AWVNLMHPLNPTKLLQTIVRQFYVRSLQEAGKATPSCQILSSMLIKEDHLNDEFNEYL SDKCYLVMLNDLSTAEEWKQIKMLFPDNKKGSRIIVFTQHVEVASFCARTEEVAPEQM QLFADQTLYAFRLLCNTGAKDGVDSMEDSSNLNEDTTYNAVEGKSLPRTYSMVTAFKE SEIVGRVDEIKEIIELISKGSQQLEKISVWGMGGIGKTTLIQNVYRSEKVKKMFDKHA CVTIMRPFNLNDLLMSLVRQLEDSKTSGEKELASILEGKKYLIVLDDVLSTTEWNAIE SYFPAMETGSRIIITTRHESIAKHCSGDQQGKIYQLNRLGDSDAKNLFAKKVT</aaseq>

Gene Sequence

<dnaseqindica>3511..4143#2927..2940#1..1039#atggaggccacggcggtgagcattggcaggtccgtgctgaagggagctcttggcttcgccaaatccaccttggtggaggaggtttccctgcagctcggcgtccagcgcgaccaggcgttcatcagggacgagctggagatgatgaactccttcctgatggccgccaatgatgagaaagatgacaacaaggtggtaaggacctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgcctccaggacttggccgtccgcttggggaggaagagttcatcctggtggctcagccctcacacgctgtgggagcggcgccgcatcgccaagcagatgaaggagctgaggggcaaggttgaggatgtgagccagaggaacatgcgttaccaactcatcaagggctccaagcctaccgtagctaccaatgtcgcacccagcagcactgcccgtgcgaccatgtctggcgtgcatgaagaacggtggcagcatgacaaggcagtagctggtctggttcggctggtcatcaaaaccaaagtcgatgaacttagagtgattgcggtgtggggaacgagtggtgatatcagggaaatgtccatcgttggaggggcctatgatcatctcaagagaagcaacaagtttgagtgctgtgcctgggttaatttgatgcatcctctgaacccaacaaagctcctgcaaaccattgttaggcaattctatgtaagatctcttcaggaggctggcaaagcaactccgtcgtgtcaaattctgagtagcatgctgataaaggaagatcatttgaacgatgagttcaatgaatatttgagtgacaagtgctacctcgttatgcttaatgacctatcaaccgctgaagaatggaagcaaataaaaatgctcttcccagacaacaagaaagggagccgaatcatagtgttcacacaacatgttgaagttgcaagcttttgtgctaggaccgaggaggtggcacccgagcaaatgcagctgtttgctgatcagactctttatgcttttcgctgtaaggtactccatccgttccaaaatgatcatcatatagttttttttaggttatttctaaataattatcatatttatattcattcattatgtatattcgttatttgttcattggagtaaatggatattgatgcatgtatcagtgcacacaagtatttataacccacatgcaatatcttgatttgctattggctaggaaatagtggaatggtgcatgcatcgagtttgttgctagagtaaatatagtatgagagagttattagcttttcttgatattggtgtacctatgaaatatgtagatcaatttagaatggaggaagtaatactaaaaaaaaatcctcaaacatgcactgaaaaagaaatattctatatatcatcatccgttgaaagcctactcttttcattcaacttgtctgctaattaaatcaatgttttatctatgtcattatgtacaaaagaaactaacactgattaatagtacgacatagctctgtctctttcatctctaagaacatctccagcaaacatatatcatattcgctatagttataattcaacaattctcttttaaaaaataacagctccaataaatcgccctactcaattttaggtactccccatagtgagtataatcgaccccaaattttgggtgcccctgtcccactccctatgccagccaagacttgttgatcgccaggggcggaaccacccattaggtagggttgggcggccagcccagctatggcccgcgccgccccaactccccatatccttcttgggccgcctaccaccacatccaattcacaattggcccataaaaaagcagcccaagtgtccaattcagattttctgggaaatcaagagttaaactcatgcccgcgatgcctcggtacctagcgccatcatctccgcatgctgcgtctcgctacccacacgcgacacctcgctacccgcacgtgacgcgtcgcttcgctacctgagcgtgcctaggctagccgccgcccgctggcgcctagcgacggccgacaccattcgctcctcctgctcggcgccacacgcgccaactcgacgacattacctcgccatcgccccgtccctaccgagttccagccattcccgcgccaacgccgccgcccggtcatcggcagcacgcagcaccgcaggccgcaacagccagtagcccagtagcttgcggcggctttagcatcggccatcgggcatccttgagaatgctcacccccatcacctactatagttaggtgcctaacgtttttctctctctcccttctaagcaaaataataatcatcttattcggggtatgtcttctcatatatttatttttttaaagatatctatcaaccatgctttatgaattgactcatatttgcaaattgatacgtttaccaatatctttttatgtatgatgaattattttggcgcaaaaattattactttattataatatcgtttttgtttgctttaatttattgattatactatatgtttatgtgattacaacataaatatagtatttgttgcatttagttgttcttattgacacgagcatcttcgccctatctttaatttaatcctgcgtccgccactgttgatcgctatcattttcactgcatccttcaccttcctctcctccccacatccctcatcttgcttggccttcgcctcctgcgaccaccacttagctggccattgctctttgccccatcaagctccaacctctgttgaaagcatattttattttgcatgttggaacggcaactccatcttaaacttactgcttaaaagccaacaatttgtaagctatataagccaaaatgccggcttataggcatactatactaagactgtgattaatttgcttgtatttagtattatgcaatacggtaatactttgagctcaactttaacttatactacataacacatttttagaggattttgaagttcaaaaatgtgtagataggtgcatttgcacttatctgaaaattcccaaggatacttgattattatgtactataatcagaatcccaccaaatttacagattgataaatcttttaattgattgggcaagtaatatatggagtaacacttatgggtcgggaggcatttaaaaattaagtagttcaattgagattgtcttttcactaacgaatggtaacctatttatacatctacaagagatttgtcttgggaaacaactaagtattatcataggaaagtagacaattagacatcatcatcatctaatattctaaataataactgttctcaagaggttggctacatttttttgctgttgtttcattgaaaagttcttgcaaccttttttccattaagggcatgtacgattcctttttaactctcgtctcgtcttaaaatataatggtgcacacctatcatgcgtgtttaagaaaataatattgttgataatattttttttttgtgtgtgcagggtgctaaagatggagtagattcaatggaggactcatctaacttaaacgaagacactacatacaacgctgtagaaggaaagagcctccctcgcacatattcaatggtaactgctttcaaggaatctgagatcgttgggcgagttgatgaaataaaggagattattgaactgatttcaaaaggtagccaacagcttgagaagatctcagtgtggggaatgggtggtattgggaaaaccactctaattcaaaatgtctaccgaagcgaaaaggttaagaagatgtttgataagcatgcatgtgtcacgatcatgcgcccgttcaatcttaatgatcttcttatgagcttagttaggcaactagaagattcaaaaacttctggagaaaaggagttggctagcattttagaaggaaagaaatacttgattgttcttgatgatgtattatccacaacagaatggaatgctatagaatcatatttcccagcaatggaaacaggaagccggatcataatcaccacaaggcatgaaagtattgctaagcattgttcaggggatcaacaaggaaaaatatatcaactcaatcgtctaggagacagcgatgcaaagaacctttttgcaaaaaaggtaacctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0559500, RefSeq:Os12g0559500