Os12g0561500

From RiceWiki
Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0561500| Description = Pectinesterase inhibitor domain containing protein| Version = NM_001073555.2 GI:297613354 GeneID:4352519| Length = 5...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0561500

Description

Pectinesterase inhibitor domain containing protein

Version

NM_001073555.2 GI:297613354 GeneID:4352519

Length

567 bp

Definition

Oryza sativa Japonica Group Os12g0561500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23203964..23204530

Sequence Coding Region

23203964..23204530

Expression

GEO Profiles:Os12g0561500

Genome Context

<gbrowseImage1> name=NC_008405:23203964..23204530 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23203964..23204530 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaccggcgccgccgaagaagctgacgcccgcgccgccgacgacgccgccgccgaaggcgaagccgatccttcccggccccggcggcgacctcgtgaaggcgctgtgcgcgaagacggactacccggtggtgtgccagatgacggtggtgccgccgccggcggcgggggcggcggcgaagctggacgccacggcggtgctgcggctggcgatgggcgcggtgcgcgccaaggcggcggcggcgaagaaggcggcgggggcgctcgccgcggacgcgaggacgccggcgctggcgaagccggtgctccgggactgcatggactcgtacgacgacatcgcgtacagcctcgacgaggccgacaaggccatggccgccggcgacaaggacacgacgggcaccatgctcgacacggcccgcaccgacgtcgacacctgcgaccagggcttcgaggaacgcgacggcgacatcccgccgctcatgtccaagcaggacgccgagctcgccaagctcgccagcaactgcatcgccatcgccgtcgccgccggcctccgctccagcagctag</cdnaseq>

Protein Sequence

<aaseq>MSPAPPKKLTPAPPTTPPPKAKPILPGPGGDLVKALCAKTDYPV VCQMTVVPPPAAGAAAKLDATAVLRLAMGAVRAKAAAAKKAAGALAADARTPALAKPV LRDCMDSYDDIAYSLDEADKAMAAGDKDTTGTMLDTARTDVDTCDQGFEERDGDIPPL MSKQDAELAKLASNCIAIAVAAGLRSSS</aaseq>

Gene Sequence

<dnaseqindica>1..567#atgtcaccggcgccgccgaagaagctgacgcccgcgccgccgacgacgccgccgccgaaggcgaagccgatccttcccggccccggcggcgacctcgtgaaggcgctgtgcgcgaagacggactacccggtggtgtgccagatgacggtggtgccgccgccggcggcgggggcggcggcgaagctggacgccacggcggtgctgcggctggcgatgggcgcggtgcgcgccaaggcggcggcggcgaagaaggcggcgggggcgctcgccgcggacgcgaggacgccggcgctggcgaagccggtgctccgggactgcatggactcgtacgacgacatcgcgtacagcctcgacgaggccgacaaggccatggccgccggcgacaaggacacgacgggcaccatgctcgacacggcccgcaccgacgtcgacacctgcgaccagggcttcgaggaacgcgacggcgacatcccgccgctcatgtccaagcaggacgccgagctcgccaagctcgccagcaactgcatcgccatcgccgtcgccgccggcctccgctccagcagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0561500, RefSeq:Os12g0561500