Os12g0562400

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0562400| Description = Similar to Phospholipase C (Fragment)| Version = NM_001073560.1 GI:115489081 GeneID:4352524| Length = 2043 bp| Defi...")
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Gene Name

Os12g0562400

Description

Similar to Phospholipase C (Fragment)

Version

NM_001073560.1 GI:115489081 GeneID:4352524

Length

2043 bp

Definition

Oryza sativa Japonica Group Os12g0562400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23254987..23257029

Sequence Coding Region

23255568..23255615,23256144..23256383,23256487..23256780

Expression

GEO Profiles:Os12g0562400

Genome Context

<gbrowseImage1> name=NC_008405:23254987..23257029 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23254987..23257029 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgcctggactcatggtgctcagatggttgcatttaacatgcaggggcatgacaaagcactccggttaatgcaaggattttttagagctaatggaggttgtggctatgtcaaaaagcctgacttcttgcttaggacaggtccaaatggtgaagtatttgaccctaacgcaagtatgcctgtgaagaaaactctgaaggtgaaagtatatatgggagatggatggcgaatggatttcagtaaaactcatttcgacaccttctctcctcctgatttctatactagggtggggatcgctggtgtgcgggcagattgtgtgatgaagaagactcgaacaatcgaggatcagtgggtaccgatgtgggatgaggagttcacattccctctgacagtcccggagctggctgtgctgagaatcgaggttcatgagtacgacatgtcggagaagcatgactttggggggcagacatgcctgccagtgtcggagctgaagcagggcatccgcgctgtgcctctccacgatcgccggggcaccaggtacaagtctgtcaggctcctcatgcgcttcgacttcctctag</cdnaseq>

Protein Sequence

<aaseq>MNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGCGYVKKPDFL LRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYTRVGIAGV RADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGGQTCLP VSELKQGIRAVPLHDRRGTRYKSVRLLMRFDFL</aaseq>

Gene Sequence

<dnaseqindica>582..629#1158..1397#1501..1794#ggatgatcccaaatttcagcaggaaacagcctgtgagtatagggaactgatcaccatccacgctggcaaaccaaaaggccatttgaaggatgcgcttaaggtggatcctgacaaagtcaggcgcctttctttgagcgaaacacagctagctaaagcaacagcttctcatggtgccgatgttataaggtaatttgcacttgctcatattattatattagaagcacagtacctatgagcattagaaattttagtgtcaagtattttaataaaataaatgttatggagtctacggaccaaacgaggtccatttgtttgactattattgttgttttagttttgttgtccagtgttctttctaaaagtatctatgtgtttacatttcatgattgaagttgatacacgtactactgggagttcatggtgaactaatttccattcatattgcataaagtttatacagttccttgaccaccagacaagtgctgttctgatgcagttaaatataattcaggttcacccagaagaatatactcagggtgtatccgaagggtacaaggattaattcttccaactatgatccaatgaatgcctggactcatggtgctcagatggttgcatttaacatgcaggttggatgacaattctcaactgctattgggcttgtttgattcttcttatactcttttctctcttcttaatatagtgatgtgcagctctcctgcgcattcaagagggaaaaaaaagcaattttcaactgccatgaatcactattgtcctcataatttcaagttgttttttttagaaaacgcaggagagctgtgcttcatttcattaagaaggaaaacaaactatccataaccaagggctcatgagcccttcacacatccacaaacatcatcacacaaggcgacacatgaccaaaaatttcaacttgttttgagtgtctcacatttgaacttggtgtttcagttgtcagcataatgccttcgaatgtaaattgatctggtagagaataaatcaatctagttgtatagttttcgtacttcgttaaaaaaaagttatgttcttgtaacagacctgaatgtaaactgcatgtagaattgtagcagctagcaatttgtcgtgaacgctgttctgactggcctttcatgtttcaggggcatgacaaagcactccggttaatgcaaggattttttagagctaatggaggttgtggctatgtcaaaaagcctgacttcttgcttaggacaggtccaaatggtgaagtatttgaccctaacgcaagtatgcctgtgaagaaaactctgaaggtgaaagtatatatgggagatggatggcgaatggatttcagtaaaactcatttcgacaccttctctcctcctgatttctatactagggtaagacagtgaaattgtcaaaaacagtagaatttatatactaggttacaaagtaatgcatgaatgaataatgtcgatggtgaatgcatatacatatatataggtggggatcgctggtgtgcgggcagattgtgtgatgaagaagactcgaacaatcgaggatcagtgggtaccgatgtgggatgaggagttcacattccctctgacagtcccggagctggctgtgctgagaatcgaggttcatgagtacgacatgtcggagaagcatgactttggggggcagacatgcctgccagtgtcggagctgaagcagggcatccgcgctgtgcctctccacgatcgccggggcaccaggtacaagtctgtcaggctcctcatgcgcttcgacttcctctagctagctttctacctagctagtgctgctgccaaaaccagaataccagatgatgtatcttactagttttctaggcttcttcagctggtgcatatatgtactatggatgtagatgtactatttttgtaatcacacatgcatcttgcatgtcttgataatgataataatgctagcatggttggtaggaatacacatacattttgtgcgattttgttggctatatctagtattctagtcagtgatatttatcaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0562400, RefSeq:Os12g0562400