Os12g0564800

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0564800| Description = Disease resistance protein family protein| Version = NM_001073575.1 GI:115489111 GeneID:4352540| Length = 4785 bp| ...")
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Gene Name

Os12g0564800

Description

Disease resistance protein family protein

Version

NM_001073575.1 GI:115489111 GeneID:4352540

Length

4785 bp

Definition

Oryza sativa Japonica Group Os12g0564800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23370874..23375658

Sequence Coding Region

23370979..23372995,23373200..23374053,23375305..23375355

Expression

GEO Profiles:Os12g0564800

Genome Context

<gbrowseImage1> name=NC_008405:23370874..23375658 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23370874..23375658 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatttcttcctcaggcgctgcggttccattggccggtctcttgcagagcacaccatacccacaaacagagagggggatggaagctgttgtatgcgcatcacatggagctgtagggtccctgctatggaagctaagtgccttgctctctgatgaatataaccttctcactggtgttaagagtaatattatgttccttaaagctgagcttgagagcatagatgttttcctcaagaagatgtatgagtttgaggaccccgatgagcaatctttgttctggatgaaggagttcagggagctgtcctatgacattgaagacatcattgatgcttccatgttctcccttggtcatgagtccaatcgcagaccccgtggcttcaaggggtttgctggcaggtgcatggacttcttgacaaatgtcaagacacgccattggattgccaagaaaatccattgtctcaaatgctgtgttatagaagctagcaatcggcgtgcaaggtacaaggtcgatggttctgtctccaaactgagtaggacaagcttagaccctcgcttaccagcattctacacagagacgacaaggcttgttggaattgatggcccaagggataaactcatcaagatgctagtggaaggggacgacgcattggtgcatcagctgaaggtggtctccattgttggatttggaggccttggaaagactactcttgcaaatgaagtgtgccggaagcttgaaggacaatttaagtatcaagcttttgtgtcagtgtcccaaaaaccagacattaagaagattctgagacatatactctctcagatctgctggcgagagtgtatcagtgatgaagcatgggatgagcagcagctcatccacacaataagacaattccttaaggataagaggtattttattgttatcgatgatatatggagcacatcagcatggagaacaatcaaatgtgcttttcccgaaaataactgttccagtagaatattgacgacgacacgtatcatcgcagttgctaagtattgttgctcacctcaccatgacaatgtatatgaaataaagcctcttggtgcaattcactctaaaagcttatttttcaaacgaacttttggttctgaagataaatgccctcttcatctgaaagaagtttctaatgcaatcttgagaaaatgtggtggcttgccactgggaattatcacagtagctagcttattggctaataaagctagtacaaaagaagaatgggagagcatacataattctattggttcagctcttgaaaaagatacagatatggaagaaatgaaaaggatattgctccttagttatgatgatcttccttaccatttgaagacatgtttgctatatctaagtattattccagaagattacgagatcaagagagatcggttaataaggagatggattgctgaaggtttcatccctacagaaggggtgcatgatatggaggaagtaggcgaatgctatttcaacgatcttatcaacaggagtatgattctaccagttaatatccaatatgatggtcgagctgatgcttgtcgtgtgcatgatatgattcttgatctcatcatatccatatctgtcaaagaaaattttgtaaccttgcacggtgaccaaaactacaaaatagtgcaacaaaataaggttcgtcgcctatccctcaactatcatgctcgagaagatataatgataccatcaagtatgattgtttctcatgtccgatccctcactatctttggatatgctgaacatatgcctgctctgtcaaaattgcaatttatgcgagtgttagatgtagaaaataaaatggtgttggatcacagttttctcaagcatatacacaggctttctcaattgaagtacctgcgactcaatgtaagaagaatcactgcacttcctgaacaactaggagaattgcagaatttgcagaccttagacttaagatggacacaaataaagaaattgccatctagtatcgttcgactgcagaaattagtatgcctaagggtaaacagtttagaattgcctgaagggattggaaatctgcaagctctacaggaattatcagagattgaaatcaaccacaatacatcagtgtattctctgcaggagctgggaaatctgaagaaactaagaattcttgggctgaattggagcatcagtgattcaaattgtgacatcaaaatttacgcagataacttagtcacgtccctctgtaaactaggcatgttcaatcttcgatctatacaaattcaaggttatcatattatttcccttgatttcttactggattcttggtttcctcctcctcatctcctccagaaatttgagatgtccataagctactttttccccagaatcccaaagtggatagagtcacttgagtacctcagttacctagacatctacatcaacccagtggatgaggaaacattccaaattcttgcgggcttgccgtctttaatatttctttggatatcctctagagcagcaacccctaaaaaagggttaattatcagctataatgggttccagtgtctgagggagctctacttcacctgttgggaaagcaagacaggtatgatgtttgaagcaggagccatgccaaaacttgaaaagcttcgggttccatataatgcatgtgatatatgctctttgaatggtggtatggattttggcatccaacacctctgttccctgaaacatctccatgttgagattatttgccgtggtgcaaagcttcaggaggtggaggccttggagaatgctatcaaaagcgcagctggcctcctttctgatgagctcacttttgaagtaagtagatgggatgaagaagagattattgatatggaccaagaactggcagaagatgattttgatacaattaattga</cdnaseq>

Protein Sequence

<aaseq>MAISSSGAAVPLAGLLQSTPYPQTERGMEAVVCASHGAVGSLLW KLSALLSDEYNLLTGVKSNIMFLKAELESIDVFLKKMYEFEDPDEQSLFWMKEFRELS YDIEDIIDASMFSLGHESNRRPRGFKGFAGRCMDFLTNVKTRHWIAKKIHCLKCCVIE ASNRRARYKVDGSVSKLSRTSLDPRLPAFYTETTRLVGIDGPRDKLIKMLVEGDDALV HQLKVVSIVGFGGLGKTTLANEVCRKLEGQFKYQAFVSVSQKPDIKKILRHILSQICW RECISDEAWDEQQLIHTIRQFLKDKRYFIVIDDIWSTSAWRTIKCAFPENNCSSRILT TTRIIAVAKYCCSPHHDNVYEIKPLGAIHSKSLFFKRTFGSEDKCPLHLKEVSNAILR KCGGLPLGIITVASLLANKASTKEEWESIHNSIGSALEKDTDMEEMKRILLLSYDDLP YHLKTCLLYLSIIPEDYEIKRDRLIRRWIAEGFIPTEGVHDMEEVGECYFNDLINRSM ILPVNIQYDGRADACRVHDMILDLIISISVKENFVTLHGDQNYKIVQQNKVRRLSLNY HAREDIMIPSSMIVSHVRSLTIFGYAEHMPALSKLQFMRVLDVENKMVLDHSFLKHIH RLSQLKYLRLNVRRITALPEQLGELQNLQTLDLRWTQIKKLPSSIVRLQKLVCLRVNS LELPEGIGNLQALQELSEIEINHNTSVYSLQELGNLKKLRILGLNWSISDSNCDIKIY ADNLVTSLCKLGMFNLRSIQIQGYHIISLDFLLDSWFPPPHLLQKFEMSISYFFPRIP KWIESLEYLSYLDIYINPVDEETFQILAGLPSLIFLWISSRAATPKKGLIISYNGFQC LRELYFTCWESKTGMMFEAGAMPKLEKLRVPYNACDICSLNGGMDFGIQHLCSLKHLH VEIICRGAKLQEVEALENAIKSAAGLLSDELTFEVSRWDEEEIIDMDQELAEDDFDTI N</aaseq>

Gene Sequence

<dnaseqindica>2664..4680#1606..2459#304..354#agcatcgcctccgccactccggcgagccatctccgccgccggcggcgacggccgcctctccctccctcctccttcccctatactcttctcctcctacctccaccaacggaagtacgactgtacccaaaacccttcccgtcccctcacctgcgccgccgtgacagccgcgatggtcgccggcggagaaggccggccggggacccccaaagaaaggaagggggtgttccagtgtggttgtccgggaagtttctttgattccgcgagactgaacttgccagccacgttttgggcttcgtcttgtagatggcgatttcttcctcaggcgctgcggttccattggccggtctcttgcaggtagagaattctttgaatgattgatgttgactagctataaacgtaagaatgattggatgatggtgctatctttcttctggacagcttgactgtccctggatctggatctgcacgtcttatgaaatttcgcacttactctaacctgaatagatgtaactgctttatttctttttgtctcaccttgacaaagttagcatatcttgaaatatactttgcccaattgtatagccttttctagtttttatatgaccatgagtgattgcttttggagagaatacctgctcttcactctggtcaatagatttcctgtctgactaaagtcagttgccttggtattcctgcatatatgtagcaaacatgttatcagtacatttatatgtttcactttcatattgagtagaggaatcacatagaacctgattagctgagtactacattatcaccaatgtgaaggaacgtgccatatgttcctcaaagctgagactgaccagccaaccactggtcttgggttttcaaatggtaaatttctattgcctcttgtcttgcagttcaataattcctataccatttatttttctcctatttatatatttctgaacgcttttgtttgatgtttagtgtgttggacagacacttgggctaagactaagaccaaccaccacacagttaactattttttccaagtatgaactatcatttcagggacaacaatatttatacatgttagaccacctcggttatcttaattggctatattattaatcttgacaagtatgctccaaacctgtcattttctatgtcctagaatttgttcaaaagaagactaggtcgtatctaattctaccttgatcttgagtgctcgattatcctaagggtctaacttaagtggtgccaacatctgtcttcactaggtagattcactagataataatgaatgacacatgatatgacatcattcctcctcttgactaattgtctaaccttgcatatctagtataagcaattcacacttgatttcttcctgacaagtttcctgatttgttttcctaaggaacaatcttatattgaaatgtaatttgtcccgtttatgtgtttttatgtcataagatgctacagacaccccacctgcttactccctagtccctccaccctgttcacttcaagcaatcatcttcttttcttgtgcacgtccactttgactaactaagcatgtataaaaggcctgattgcctggaaaattcatagttgcagagcacaccatacccacaaacagagagggggatggaagctgttgtatgcgcatcacatggagctgtagggtccctgctatggaagctaagtgccttgctctctgatgaatataaccttctcactggtgttaagagtaatattatgttccttaaagctgagcttgagagcatagatgttttcctcaagaagatgtatgagtttgaggaccccgatgagcaatctttgttctggatgaaggagttcagggagctgtcctatgacattgaagacatcattgatgcttccatgttctcccttggtcatgagtccaatcgcagaccccgtggcttcaaggggtttgctggcaggtgcatggacttcttgacaaatgtcaagacacgccattggattgccaagaaaatccattgtctcaaatgctgtgttatagaagctagcaatcggcgtgcaaggtacaaggtcgatggttctgtctccaaactgagtaggacaagcttagaccctcgcttaccagcattctacacagagacgacaaggcttgttggaattgatggcccaagggataaactcatcaagatgctagtggaaggggacgacgcattggtgcatcagctgaaggtggtctccattgttggatttggaggccttggaaagactactcttgcaaatgaagtgtgccggaagcttgaaggacaatttaagtatcaagcttttgtgtcagtgtcccaaaaaccagacattaagaagattctgagacatatactctctcagatctgctggcgagagtgtatcagtgatgaagcatgggatgagcagcagctcatccacacaataagacaattccttaaggataagaggtatgtgccatgtttccatgacaaccttgtctggggctctatgcatttaacaccatcaattatgcattgatctttttcatgttagaactaattgataaaacaacagatctttggaatgatgcatgtacacttgcttattactactatccacttggttatacttttagctttagcaatacctgtttaacttcaatttttttataggtattttattgttatcgatgatatatggagcacatcagcatggagaacaatcaaatgtgcttttcccgaaaataactgttccagtagaatattgacgacgacacgtatcatcgcagttgctaagtattgttgctcacctcaccatgacaatgtatatgaaataaagcctcttggtgcaattcactctaaaagcttatttttcaaacgaacttttggttctgaagataaatgccctcttcatctgaaagaagtttctaatgcaatcttgagaaaatgtggtggcttgccactgggaattatcacagtagctagcttattggctaataaagctagtacaaaagaagaatgggagagcatacataattctattggttcagctcttgaaaaagatacagatatggaagaaatgaaaaggatattgctccttagttatgatgatcttccttaccatttgaagacatgtttgctatatctaagtattattccagaagattacgagatcaagagagatcggttaataaggagatggattgctgaaggtttcatccctacagaaggggtgcatgatatggaggaagtaggcgaatgctatttcaacgatcttatcaacaggagtatgattctaccagttaatatccaatatgatggtcgagctgatgcttgtcgtgtgcatgatatgattcttgatctcatcatatccatatctgtcaaagaaaattttgtaaccttgcacggtgaccaaaactacaaaatagtgcaacaaaataaggttcgtcgcctatccctcaactatcatgctcgagaagatataatgataccatcaagtatgattgtttctcatgtccgatccctcactatctttggatatgctgaacatatgcctgctctgtcaaaattgcaatttatgcgagtgttagatgtagaaaataaaatggtgttggatcacagttttctcaagcatatacacaggctttctcaattgaagtacctgcgactcaatgtaagaagaatcactgcacttcctgaacaactaggagaattgcagaatttgcagaccttagacttaagatggacacaaataaagaaattgccatctagtatcgttcgactgcagaaattagtatgcctaagggtaaacagtttagaattgcctgaagggattggaaatctgcaagctctacaggaattatcagagattgaaatcaaccacaatacatcagtgtattctctgcaggagctgggaaatctgaagaaactaagaattcttgggctgaattggagcatcagtgattcaaattgtgacatcaaaatttacgcagataacttagtcacgtccctctgtaaactaggcatgttcaatcttcgatctatacaaattcaaggttatcatattatttcccttgatttcttactggattcttggtttcctcctcctcatctcctccagaaatttgagatgtccataagctactttttccccagaatcccaaagtggatagagtcacttgagtacctcagttacctagacatctacatcaacccagtggatgaggaaacattccaaattcttgcgggcttgccgtctttaatatttctttggatatcctctagagcagcaacccctaaaaaagggttaattatcagctataatgggttccagtgtctgagggagctctacttcacctgttgggaaagcaagacaggtatgatgtttgaagcaggagccatgccaaaacttgaaaagcttcgggttccatataatgcatgtgatatatgctctttgaatggtggtatggattttggcatccaacacctctgttccctgaaacatctccatgttgagattatttgccgtggtgcaaagcttcaggaggtggaggccttggagaatgctatcaaaagcgcagctggcctcctttctgatgagctcacttttgaagtaagtagatgggatgaagaagagattattgatatggaccaagaactggcagaagatgattttgatacaattaattgaaagcatagcacaatactgaggtatattatttgttctgttaagccacaacaatttgacatatttttattattaaattttatgggtaatgcgttttggtcgtctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0564800, RefSeq:Os12g0564800