Os12g0569300

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0569300| Description = Thaumatin, pathogenesis-related family protein| Version = NM_001073605.2 GI:297613384 GeneID:4352571| Length = 995 b...")
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Gene Name

Os12g0569300

Description

Thaumatin, pathogenesis-related family protein

Version

NM_001073605.2 GI:297613384 GeneID:4352571

Length

995 bp

Definition

Oryza sativa Japonica Group Os12g0569300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23631445..23632439

Sequence Coding Region

23631487..23632188

Expression

GEO Profiles:Os12g0569300

Genome Context

<gbrowseImage1> name=NC_008405:23631445..23632439 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23631445..23632439 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagcagctcgccctcgttctcctcgtcgccgtcgtggcggcggcggcgacgtcggtggccgccgccaccaagctgacgctccacaacctgtgcccgtacccggtgtggccgctggtgacgcccaacaccggcttcccttccatctccggcaacaccgcgcggctcgacggcggcgggcgcgggctcgtgtcgtacgacttcccggcgagcttctgggcggggcgcgtcgtggcgcgcaccgggtgcggcggcggcggcggactggtgcggtgcgagaccgggaacgcgccgccggcgacggtggtgcagctggtggtgcactcgccggagggggcacaagacctggccgcgtacagcgtgagcttggtggatgggttcaacgtcccggcggtggtgagcccgcaggccatcgccggcggcgggcagtgcccggcgctggggtgcgcggccgacctgaacgccgggtgcccgcggtcgcagcgcgtcgtcggcgccggcggcgccgtcgtggcgtgccggggcacggcggactacttcaaggcgcggtgcccgctgacgaggacgacggggagcgacgtcgagcccgtgccgcagcactgcctcgcccccggcgagctcaaggtcgtcttctgccagccgtccatggtcgccgccgccgtgccggagctcatccgcaccgtcgtcgccaacatctag</cdnaseq>

Protein Sequence

<aaseq>MAKQLALVLLVAVVAAAATSVAAATKLTLHNLCPYPVWPLVTPN TGFPSISGNTARLDGGGRGLVSYDFPASFWAGRVVARTGCGGGGGLVRCETGNAPPAT VVQLVVHSPEGAQDLAAYSVSLVDGFNVPAVVSPQAIAGGGQCPALGCAADLNAGCPR SQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPSMV AAAVPELIRTVVANI</aaseq>

Gene Sequence

<dnaseqindica>43..744#atcctcaccaactcactcccttgaaaagctagacacacacacatggccaagcagctcgccctcgttctcctcgtcgccgtcgtggcggcggcggcgacgtcggtggccgccgccaccaagctgacgctccacaacctgtgcccgtacccggtgtggccgctggtgacgcccaacaccggcttcccttccatctccggcaacaccgcgcggctcgacggcggcgggcgcgggctcgtgtcgtacgacttcccggcgagcttctgggcggggcgcgtcgtggcgcgcaccgggtgcggcggcggcggcggactggtgcggtgcgagaccgggaacgcgccgccggcgacggtggtgcagctggtggtgcactcgccggagggggcacaagacctggccgcgtacagcgtgagcttggtggatgggttcaacgtcccggcggtggtgagcccgcaggccatcgccggcggcgggcagtgcccggcgctggggtgcgcggccgacctgaacgccgggtgcccgcggtcgcagcgcgtcgtcggcgccggcggcgccgtcgtggcgtgccggggcacggcggactacttcaaggcgcggtgcccgctgacgaggacgacggggagcgacgtcgagcccgtgccgcagcactgcctcgcccccggcgagctcaaggtcgtcttctgccagccgtccatggtcgccgccgccgtgccggagctcatccgcaccgtcgtcgccaacatctagctgtgtgtgaggtcctcgtcgtgcacacgtggcgcgtcctgcgtgcgccacgtgtacggactagctgtgtgtagaagtgggtaggggggaataataatgacagtgcgtatacacgtatgtgtacaccgtatgtcgactgtacgcgtacggacgggcacagtctggtattagtgttgtacgtgtacaatctacgacgtattttgttttttatgtaagaaaaaaaaatgctttgatgtgtttttattgccacg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0569300, RefSeq:Os12g0569300